| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g03165 | 12:1,360,288-1,360,858 | - | C2H12g12992 | CX12g018471 | LOC_Os12g03540 | Os12g0129400 | - | Detail |
| C1H12g14356 | 12:1,375,895-1,376,203 | + | C2H12g26837 | - | - | - | - | Detail |
| C1H12g18819 | 12:1,376,295-1,376,501 | + | C2H12g25798 | - | - | - | - | Detail |
| C1H12g26172 | 12:1,376,636-1,376,971 | + | C2H12g21094 | CX12g016696 | LOC_Os12g06930 | - | - | Detail |
| C1H12g09635 | 12:1,397,115-1,402,343 | - | C2H12g15851 | CX12g017965 | LOC_Os12g03720 | Os12g0131150 | - | Detail |
| C1H12g19116 | 12:1,405,307-1,408,132 | + | C2H12g29504 | CX12g017842 | LOC_Os12g03730 | Os12g0131200 | - | Detail |
| C1H12g05970 | 12:1,408,673-1,409,306 | - | C2H12g21923 | CX12g016235 | LOC_Os11g03920 | Os12g0131266 | - | Detail |
| C1H12g16146 | 12:1,409,316-1,409,582 | - | C2H12g30346 | - | - | - | - | Detail |
| C1H12g22049 | 12:1,410,865-1,415,552 | - | C2H12g04882 | CX12g015993 | LOC_Os12g03790 | Os12g0131900 | - | Detail |
| C1H12g27375 | 12:1,426,768-1,431,870 | + | C2H12g26793 | CX12g015231 | LOC_Os12g03810 | Os12g0132200 | - | Detail |
| C1H12g17838 | 12:1,428,448-1,432,862 | - | C2H12g09084 | CX12g016449 | LOC_Os12g03816 | Os12g0132300 | OsCML3 | Detail |
| C1H12g18740 | 12:1,433,948-1,437,904 | - | C2H12g06878 | CX12g016015 | LOC_Os12g03822 | Os12g0132400 | OsRIP1 | Detail |
| C1H12g16357 | 12:1,438,837-1,439,218 | - | C2H12g15683 | CX12g015235 | - | - | - | Detail |
| C1H12g00495 | 12:1,442,784-1,448,368 | - | C2H12g06293 | CX12g016345 | LOC_Os11g04010 | Os12g0500800 | - | Detail |
| C1H12g09294 | 12:1,450,440-1,454,857 | - | C2H12g25753 | - | LOC_Os12g03830 | Os12g0132500 | - | Detail |
| C1H12g05342 | 12:1,459,029-1,463,614 | - | C2H12g10240 | - | LOC_Os12g03860 | Os12g0132800 | - | Detail |
| C1H12g05091 | 12:1,469,365-1,470,729 | + | C2H12g14231 | - | - | Os12g0132900 | - | Detail |
| C1H12g13868 | 12:1,470,627-1,476,361 | - | C2H12g02432 | - | LOC_Os12g03870 | Os12g0133000 | - | Detail |
| C1H12g01014 | 12:1,477,537-1,479,737 | - | C2H12g01792 | CX11g013375 | LOC_Os12g03880 | Os12g0133050 | OsP0C | Detail |
| C1H12g17796 | 12:1,487,917-1,495,408 | - | C2H12g17288 | - | LOC_Os12g03899 | Os12g0133100 | OsVMT, OsZIFL12, OsVMT/OsZIFL12 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g07855 | 3:16,396,843-16,409,689 | + | C1H3g10798 | CX3g028155 | LOC_Os03g31550 | Os03g0429800 | - | Detail |
| C2H3g12546 | 3:16,420,314-16,424,824 | + | C1H3g14619 | CX3g028121 | LOC_Os03g31570 | Os03g0430000 | OsDES1 | Detail |
| C2H3g18752 | 3:16,432,063-16,446,405 | + | C1H3g13146 | CX3g026444 | LOC_Os03g31594 | Os03g0430400 | OsJMJ715 | Detail |
| C2H3g13597 | 3:16,449,884-16,452,182 | + | C1H3g04215 | CX3g030845 | LOC_Os03g31630 | Os03g0430500 | OsSUB29 | Detail |
| C2H3g04912 | 3:16,453,642-16,455,085 | + | C1H3g11550 | CX3g029098 | LOC_Os03g31634 | Os03g0204300 | - | Detail |
| C2H3g09273 | 3:16,469,367-16,470,649 | + | C1H3g12654 | CX3g029853 | LOC_Os03g31679 | Os03g0431100 | OsWIH2 | Detail |
| C2H3g11483 | 3:16,472,020-16,479,651 | - | C1H3g10950 | CX3g026573 | LOC_Os03g31690 | Os03g0431200 | - | Detail |
| C2H3g08545 | 3:16,491,689-16,508,230 | + | C1H3g03395 | CX3g026463 | LOC_Os03g31730 | Os03g0431800 | - | Detail |
| C2H3g19753 | 3:16,516,952-16,523,993 | - | C1H3g15477 | CX3g025912 | LOC_Os03g31750 | Os03g0432100 | - | Detail |
| C2H3g18740 | 3:16,559,998-16,570,211 | + | C1H3g17819 | CX3g029807 | LOC_Os03g31839 | Os03g0432900 | - | Detail |
| C2H3g14377 | 3:16,656,714-16,659,674 | + | C1H3g09806 | CX3g025418 | LOC_Os03g32040 | Os03g0434400 | - | Detail |
| C2H3g17688 | 3:16,663,389-16,668,964 | - | C1H3g22912 | CX3g025501 | LOC_Os03g32050 | Os03g0434800 | - | Detail |
| C2H3g17788 | 3:16,690,588-16,691,753 | + | C1H3g11869 | CX3g026054 | LOC_Os03g32100 | Os03g0435300 | - | Detail |
| C2H3g20838 | 3:16,743,800-16,747,099 | - | C1H3g01722 | CX3g027499 | LOC_Os03g32150 | Os03g0435900 | - | Detail |
| C2H3g23837 | 3:16,752,196-16,760,834 | - | C1H3g03137 | CX3g025719 | LOC_Os03g31560 | - | - | Detail |
| C2H3g09474 | 3:16,760,341-16,764,889 | + | C1H3g04300 | CX3g030993 | LOC_Os03g32160 | Os03g0436300 | - | Detail |
| C2H3g18719 | 3:16,768,316-16,770,710 | + | - | - | - | - | - | Detail |
| C2H3g01338 | 3:16,823,722-16,824,509 | + | - | - | - | - | - | Detail |
| C2H3g20512 | 3:16,867,581-16,872,860 | - | C1H3g27865 | CX3g031352 | LOC_Os03g32270 | Os03g0437600 | - | Detail |
| C2H3g26379 | 3:16,914,732-16,916,084 | - | C1H3g24236 | CX3g028299 | LOC_Os03g32314 | Os03g0438100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |