| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g03165 | 12:1,360,288-1,360,858 | - | C2H12g12992 | CX12g018471 | LOC_Os12g03540 | Os12g0129400 | - | Detail |
| C1H12g14356 | 12:1,375,895-1,376,203 | + | C2H12g26837 | - | - | - | - | Detail |
| C1H12g18819 | 12:1,376,295-1,376,501 | + | C2H12g25798 | - | - | - | - | Detail |
| C1H12g26172 | 12:1,376,636-1,376,971 | + | C2H12g21094 | CX12g016696 | LOC_Os12g06930 | - | - | Detail |
| C1H12g09635 | 12:1,397,115-1,402,343 | - | C2H12g15851 | CX12g017965 | LOC_Os12g03720 | Os12g0131150 | - | Detail |
| C1H12g19116 | 12:1,405,307-1,408,132 | + | C2H12g29504 | CX12g017842 | LOC_Os12g03730 | Os12g0131200 | - | Detail |
| C1H12g05970 | 12:1,408,673-1,409,306 | - | C2H12g21923 | CX12g016235 | LOC_Os11g03920 | Os12g0131266 | - | Detail |
| C1H12g16146 | 12:1,409,316-1,409,582 | - | C2H12g30346 | - | - | - | - | Detail |
| C1H12g22049 | 12:1,410,865-1,415,552 | - | C2H12g04882 | CX12g015993 | LOC_Os12g03790 | Os12g0131900 | - | Detail |
| C1H12g27375 | 12:1,426,768-1,431,870 | + | C2H12g26793 | CX12g015231 | LOC_Os12g03810 | Os12g0132200 | - | Detail |
| C1H12g17838 | 12:1,428,448-1,432,862 | - | C2H12g09084 | CX12g016449 | LOC_Os12g03816 | Os12g0132300 | OsCML3 | Detail |
| C1H12g18740 | 12:1,433,948-1,437,904 | - | C2H12g06878 | CX12g016015 | LOC_Os12g03822 | Os12g0132400 | OsRIP1 | Detail |
| C1H12g16357 | 12:1,438,837-1,439,218 | - | C2H12g15683 | CX12g015235 | - | - | - | Detail |
| C1H12g00495 | 12:1,442,784-1,448,368 | - | C2H12g06293 | CX12g016345 | LOC_Os11g04010 | Os12g0500800 | - | Detail |
| C1H12g09294 | 12:1,450,440-1,454,857 | - | C2H12g25753 | - | LOC_Os12g03830 | Os12g0132500 | - | Detail |
| C1H12g05342 | 12:1,459,029-1,463,614 | - | C2H12g10240 | - | LOC_Os12g03860 | Os12g0132800 | - | Detail |
| C1H12g05091 | 12:1,469,365-1,470,729 | + | C2H12g14231 | - | - | Os12g0132900 | - | Detail |
| C1H12g13868 | 12:1,470,627-1,476,361 | - | C2H12g02432 | - | LOC_Os12g03870 | Os12g0133000 | - | Detail |
| C1H12g01014 | 12:1,477,537-1,479,737 | - | C2H12g01792 | CX11g013375 | LOC_Os12g03880 | Os12g0133050 | OsP0C | Detail |
| C1H12g17796 | 12:1,487,917-1,495,408 | - | C2H12g17288 | - | LOC_Os12g03899 | Os12g0133100 | OsVMT, OsZIFL12, OsVMT/OsZIFL12 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g08537 | 1:24,645,168-24,654,570 | - | C1H1g16435 | CX1g002269 | LOC_Os01g48330 | Os01g0674100 | - | Detail |
| C2H1g25308 | 1:24,656,210-24,656,871 | + | - | CX6g042280 | LOC_Os01g48339 | Os01g0372100 | - | Detail |
| C2H1g09956 | 1:24,665,832-24,666,220 | + | C1H1g18336 | CX1g002853 | LOC_Os01g48360 | Os01g0674400 | - | Detail |
| C2H1g02713 | 1:24,667,701-24,672,177 | - | C1H1g27753 | CX1g000620 | LOC_Os01g48370 | Os01g0674500 | - | Detail |
| C2H1g18985 | 1:24,677,358-24,683,617 | + | C1H1g00871 | CX1g004696 | LOC_Os01g48380 | Os01g0674700 | ASL3 | Detail |
| C2H1g24321 | 1:24,685,104-24,691,892 | + | C1H1g21765 | CX1g004277 | LOC_Os01g48390 | Os01g0674800 | - | Detail |
| C2H1g20771 | 1:24,694,684-24,697,004 | + | C1H1g11274 | CX1g000551 | LOC_Os01g48410 | Os01g0675000 | OsRopGEF6 | Detail |
| C2H1g09998 | 1:24,698,068-24,699,873 | - | C1H1g18154 | CX1g000957 | LOC_Os01g48420 | Os01g0675100 | - | Detail |
| C2H1g00882 | 1:24,702,234-24,703,340 | - | C1H1g15939 | CX1g000359 | LOC_Os01g48430 | Os01g0675400 | - | Detail |
| C2H1g29363 | 1:24,705,133-24,709,010 | - | C1H1g11012 | CX1g002880 | LOC_Os01g48440 | Os01g0675500 | - | Detail |
| C2H1g29748 | 1:24,717,156-24,717,726 | - | C1H2g19748 | CX2g022355 | - | - | - | Detail |
| C2H1g14959 | 1:24,724,122-24,727,869 | + | C1H1g25883 | CX1g002244 | LOC_Os01g48444 | Os01g0675700 | - | Detail |
| C2H1g06845 | 1:24,752,904-24,754,591 | + | C1H1g16861 | CX1g003850 | LOC_Os01g48530 | Os01g0676900 | - | Detail |
| C2H1g03724 | 1:24,759,601-24,760,254 | + | C1H1g30124 | CX1g000037 | LOC_Os01g48540 | Os01g0677000 | - | Detail |
| C2H1g01752 | 1:24,760,299-24,761,671 | + | C1H1g30124 | CX1g000037 | LOC_Os01g48540 | Os01g0677000 | - | Detail |
| C2H1g01495 | 1:24,774,611-24,778,283 | + | C1H1g08755 | CX1g000351 | LOC_Os01g48570 | Os11g0466300 | - | Detail |
| C2H1g13965 | 1:24,781,479-24,784,206 | + | C1H1g10109 | CX1g003581 | LOC_Os01g48580 | Os01g0677500 | - | Detail |
| C2H1g18016 | 1:24,799,418-24,801,703 | + | - | CX1g000852 | LOC_Os01g48620 | Os01g0678000 | - | Detail |
| C2H1g00029 | 1:24,808,183-24,811,092 | + | - | CX1g004827 | LOC_Os01g48640 | Os01g0678100 | - | Detail |
| C2H1g26788 | 1:24,813,151-24,816,140 | + | - | CX1g006166 | LOC_Os01g48660 | Os01g0678400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |