| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g22368 | 12:1,028,749-1,031,754 | + | C2H12g30295 | CX12g017662 | LOC_Os12g02980 | Os12g0123500 | OsAPY9 | Detail |
| C1H12g05221 | 12:1,035,004-1,040,764 | + | C2H12g23996 | CX12g017662 | LOC_Os12g02980 | Os12g0123500 | OsAPY9 | Detail |
| C1H12g25659 | 12:1,058,143-1,059,669 | + | C2H12g09367 | CX12g016621 | LOC_Os12g03040 | Os12g0123700 | NAC131, ONAC131 | Detail |
| C1H12g22976 | 12:1,083,130-1,087,111 | - | C2H12g07694 | CX12g015401 | LOC_Os12g03060 | Os12g0123900 | - | Detail |
| C1H12g25682 | 12:1,088,173-1,089,447 | + | C2H11g13818 | CX12g017754 | LOC_Os12g03070 | Os12g0124000 | - | Detail |
| C1H12g19027 | 12:1,096,395-1,099,481 | - | C2H12g12920 | CX12g015071 | LOC_Os12g03100 | Os12g0124400 | - | Detail |
| C1H12g21501 | 12:1,123,964-1,124,993 | - | C2H12g28075 | CX12g017678 | LOC_Os12g03150 | Os12g0125000 | OsMYB60 | Detail |
| C1H12g26200 | 12:1,135,004-1,135,948 | - | C2H12g12728 | CX12g016071 | LOC_Os12g03180 | Os12g0125300 | - | Detail |
| C1H12g16810 | 12:1,136,434-1,139,886 | - | C2H12g04503 | CX12g016045 | LOC_Os12g03190 | Os12g0125400 | - | Detail |
| C1H12g02357 | 12:1,140,404-1,145,638 | - | C2H12g11583 | CX12g016734 | LOC_Os12g03200 | Os12g0125800 | - | Detail |
| C1H12g15575 | 12:1,149,772-1,151,284 | - | C2H12g17589 | CX12g016478 | LOC_Os12g03260 | Os12g0126000 | - | Detail |
| C1H12g11610 | 12:1,160,761-1,165,060 | - | C2H12g07942 | CX12g015633 | LOC_Os12g03260 | Os12g0126000 | - | Detail |
| C1H12g08527 | 12:1,172,058-1,172,980 | - | C2H12g24280 | CX12g016190 | LOC_Os11g03520 | Os12g0126100 | OsGELP115 | Detail |
| C1H12g20982 | 12:1,173,981-1,176,323 | + | C2H12g24293 | CX12g016754 | LOC_Os12g03270 | Os12g0126200 | - | Detail |
| C1H12g18779 | 12:1,177,125-1,181,632 | - | C2H12g23067 | CX12g016808 | LOC_Os12g03290 | Os12g0126300 | OsWRI1-2 | Detail |
| C1H12g15178 | 12:1,184,769-1,187,985 | - | C2H11g10212 | CX12g016429 | LOC_Os12g03320 | Os11g0129800 | - | Detail |
| C1H12g22481 | 12:1,195,103-1,203,372 | - | C2H12g22101 | CX12g017029 | LOC_Os12g03340 | Os12g0126800 | - | Detail |
| C1H12g17482 | 12:1,204,631-1,205,526 | - | C2H12g00758 | CX12g017256 | LOC_Os12g03350 | Os11g0130200 | - | Detail |
| C1H12g09048 | 12:1,206,742-1,208,484 | + | C2H12g11621 | CX12g018353 | LOC_Os12g03360 | Os12g0127100 | - | Detail |
| C1H12g09150 | 12:1,217,148-1,218,644 | - | C2H12g17222 | CX11g011497 | LOC_Os12g03390 | Os12g0127400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g17746 | 3:5,298,248-5,304,864 | + | C1H3g17331 | CX3g028416 | LOC_Os03g11520 | Os03g0213900 | - | Detail |
| C2H3g08543 | 3:5,305,257-5,310,545 | + | C1H3g12951 | CX3g030880 | LOC_Os03g11530 | Os03g0214000 | - | Detail |
| C2H3g18859 | 3:5,311,539-5,315,043 | + | C1H3g14932 | CX3g028514 | LOC_Os03g11540 | Os03g0214100 | OsRPA70b | Detail |
| C2H3g25555 | 3:5,315,485-5,320,858 | - | C1H3g10644 | CX3g029924 | LOC_Os03g11550 | Os03g0214200 | - | Detail |
| C2H3g22606 | 3:5,325,484-5,328,881 | - | C1H3g04750 | CX3g027534 | LOC_Os03g11560 | Os03g0214400 | - | Detail |
| C2H3g22039 | 3:5,331,057-5,334,978 | + | C1H3g15538 | CX3g027043 | LOC_Os03g11570 | Os03g0214600 | - | Detail |
| C2H3g03744 | 3:5,337,484-5,342,418 | - | C1H3g09681 | - | - | - | - | Detail |
| C2H3g29664 | 3:5,344,016-5,347,863 | - | C1H3g00304 | CX3g025722 | LOC_Os03g11590 | Os03g0215000 | - | Detail |
| C2H3g24849 | 3:5,374,993-5,381,339 | + | C1H3g11825 | CX3g029987 | LOC_Os03g11600 | Os03g0215200 | DL, dl(lop), lop, dl, dl1 | Detail |
| C2H3g11270 | 3:5,386,951-5,389,327 | - | C1H3g00757 | CX3g026708 | LOC_Os03g11614 | Os03g0215400 | LHS1, OsMADS1, LHS, lhs1, lhs, lhs2, op, nsr, MADS1, LHS1/OsMADS1, Lhs1, AFO | Detail |
| C2H3g18287 | 3:5,395,313-5,395,507 | - | C1H3g04456 | CX3g026708 | LOC_Os03g11614 | Os03g0215400 | LHS1, OsMADS1, LHS, lhs1, lhs, lhs2, op, nsr, MADS1, LHS1/OsMADS1, Lhs1, AFO | Detail |
| C2H3g25916 | 3:5,416,591-5,421,828 | + | C1H3g30377 | CX3g026583 | LOC_Os03g11650 | Os03g0215700 | - | Detail |
| C2H3g12512 | 3:5,422,610-5,426,000 | + | C1H3g02997 | CX3g026851 | LOC_Os03g11660 | Os03g0215800 | - | Detail |
| C2H3g19342 | 3:5,426,491-5,428,521 | - | C1H3g12813 | CX3g025630 | LOC_Os03g11670 | Os03g0215900 | OsPPR676, OsATP4 | Detail |
| C2H3g13701 | 3:5,436,359-5,437,252 | - | C1H3g00186 | CX3g030485 | LOC_Os03g11680 | Os03g0216000 | - | Detail |
| C2H3g30038 | 3:5,450,317-5,452,147 | + | C1H3g15045 | CX3g027591 | LOC_Os03g11690 | Os03g0216300 | - | Detail |
| C2H3g29170 | 3:5,452,840-5,453,269 | + | - | - | - | - | - | Detail |
| C2H3g05049 | 3:5,453,922-5,455,100 | - | C1H3g15740 | CX3g029865 | LOC_Os03g11700 | Os03g0216400 | - | Detail |
| C2H3g19799 | 3:5,456,253-5,457,305 | - | C1H3g17461 | CX3g030660 | LOC_Os03g11710 | Os03g0216500 | - | Detail |
| C2H3g02073 | 3:5,459,766-5,463,790 | + | C1H3g21782 | CX3g030548 | LOC_Os03g11720 | Os03g0216600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |