| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g07544 | 12:102,598-103,917 | + | C2H12g02893 | CX12g017682 | LOC_Os12g01100 | Os11g0101200 | OsRpp30 | Detail |
| C1H12g12488 | 12:127,314-142,590 | + | C2H12g20048 | CX12g015600 | LOC_Os12g01140 | Os12g0101800 | OsNPH1a, OsPHOT1b | Detail |
| C1H12g09986 | 12:146,095-148,796 | + | C2H12g15714 | CX12g018399 | LOC_Os12g01160 | Os12g0102100 | - | Detail |
| C1H12g25436 | 12:149,725-152,579 | + | C2H12g02013 | CX12g017181 | LOC_Os12g01170 | Os12g0102200 | - | Detail |
| C1H12g28474 | 12:159,945-166,674 | + | C2H12g07971 | CX12g017806 | LOC_Os12g01190 | Os12g0102400 | OsRINGC2-2 | Detail |
| C1H12g06345 | 12:166,769-174,343 | - | C2H12g27539 | CX12g018387 | LOC_Os12g01200 | Os12g0102500 | - | Detail |
| C1H12g23007 | 12:183,114-184,169 | + | C2H12g11186 | CX12g018791 | LOC_Os12g01210 | Os12g0102600 | - | Detail |
| C1H12g01531 | 12:184,744-185,769 | + | C2H12g11186 | CX12g018791 | LOC_Os12g01210 | Os12g0102600 | - | Detail |
| C1H12g22834 | 12:186,473-190,678 | - | C2H12g27482 | CX12g016067 | LOC_Os12g01220 | Os12g0102700 | - | Detail |
| C1H12g08323 | 12:191,472-199,298 | + | C2H12g29309 | CX12g015478 | LOC_Os12g01230 | Os12g0102900 | - | Detail |
| C1H12g30443 | 12:206,428-211,338 | - | C2H12g06286 | CX12g017122 | LOC_Os12g01240 | Os12g0103000 | - | Detail |
| C1H12g16522 | 12:229,061-230,378 | + | C2H12g09673 | CX12g017647 | LOC_Os12g01250 | Os12g0103150 | - | Detail |
| C1H12g07971 | 12:242,657-245,709 | + | C2H12g09673 | CX12g016699 | LOC_Os12g01250 | Os12g0103150 | - | Detail |
| C1H12g00720 | 12:246,660-247,943 | + | C2H11g06934 | CX12g018098 | LOC_Os12g01350 | Os12g0104200 | - | Detail |
| C1H12g07188 | 12:267,413-272,742 | + | C2H12g24208 | CX12g015572 | LOC_Os12g01360 | Os12g0104300 | - | Detail |
| C1H12g08293 | 12:273,589-276,661 | - | C2H12g07052 | CX12g015174 | LOC_Os12g01370 | Os12g0104400 | - | Detail |
| C1H12g04111 | 12:289,072-293,595 | + | C2H12g00110 | CX12g017889 | LOC_Os12g01380 | Os12g0104700 | - | Detail |
| C1H12g25419 | 12:296,094-306,499 | + | C2H12g02913 | CX12g015577 | LOC_Os12g01390 | Os12g0104800 | - | Detail |
| C1H12g09737 | 12:322,397-324,374 | - | C2H12g14287 | CX12g017835 | LOC_Os12g01430 | Os12g0105200 | - | Detail |
| C1H12g16869 | 12:325,294-329,835 | - | C2H12g09075 | CX12g016242 | LOC_Os12g01449 | Os12g0105300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H11g11863 | 11:19,117,603-19,121,425 | + | C1H11g01914 | CX11g011357 | LOC_Os11g36440 | Os11g0572700 | OsCRTISO, MHZ5, MHZ5/CRTISO, CRTISO | Detail |
| C2H11g13422 | 11:19,125,558-19,127,963 | - | C1H11g18936 | CX11g011222 | LOC_Os11g36450 | Os11g0572800 | JMJ710 | Detail |
| C2H11g26770 | 11:19,130,769-19,137,484 | - | C1H11g19358 | CX11g010869 | LOC_Os11g36880 | - | - | Detail |
| C2H11g29389 | 11:19,138,250-19,142,658 | - | C1H11g13497 | CX11g010869 | LOC_Os11g36890 | Os11g0577350 | - | Detail |
| C2H11g06789 | 11:19,147,613-19,163,472 | - | C1H11g26977 | CX11g013093 | LOC_Os11g36470 | Os11g0573000 | - | Detail |
| C2H11g21322 | 11:19,169,026-19,172,428 | + | C1H11g26926 | CX11g011761 | LOC_Os11g36480 | Os11g0573200 | - | Detail |
| C2H11g10839 | 11:19,197,783-19,200,808 | + | C1H11g24728 | CX11g011586 | LOC_Os11g36740 | Os11g0575900 | - | Detail |
| C2H11g22993 | 11:19,213,454-19,215,976 | + | - | CX11g013980 | LOC_Os11g36760 | Os11g0576100 | - | Detail |
| C2H11g27642 | 11:19,236,348-19,238,024 | + | C1H11g28846 | CX11g010880 | LOC_Os11g36790 | Os11g0576400 | - | Detail |
| C2H11g01112 | 11:19,245,667-19,251,021 | + | C1H11g25490 | CX11g011986 | LOC_Os11g36930 | Os11g0577700 | - | Detail |
| C2H11g02749 | 11:19,252,164-19,253,651 | + | C1H11g20417 | CX11g012965 | LOC_Os11g36940 | Os11g0577800 | - | Detail |
| C2H11g17082 | 11:19,254,574-19,258,082 | + | C1H11g23616 | CX11g014373 | LOC_Os11g36950 | - | - | Detail |
| C2H11g11502 | 11:19,259,245-19,259,987 | + | - | - | - | - | - | Detail |
| C2H11g22955 | 11:19,266,832-19,269,990 | + | C1H11g07221 | CX11g012558 | LOC_Os11g36960 | Os11g0578100 | - | Detail |
| C2H11g13105 | 11:19,281,747-19,284,724 | + | C1H11g04768 | CX11g012558 | LOC_Os11g36960 | Os11g0578225 | - | Detail |
| C2H11g08275 | 11:19,292,554-19,297,955 | + | C1H11g25485 | CX11g012558 | LOC_Os11g36560 | Os11g0578225 | - | Detail |
| C2H11g04234 | 11:19,303,003-19,303,613 | + | C1H11g25485 | CX11g012558 | LOC_Os11g36960 | Os11g0578250 | - | Detail |
| C2H11g04331 | 11:19,318,934-19,323,956 | + | C1H11g28830 | CX11g012546 | LOC_Os11g36520 | Os11g0578500 | - | Detail |
| C2H11g16636 | 11:19,328,125-19,329,357 | + | C1H11g25206 | CX11g012020 | LOC_Os11g37010 | Os11g0578700 | - | Detail |
| C2H11g25259 | 11:19,345,087-19,349,361 | + | C1H11g10451 | CX11g012003 | LOC_Os11g37050 | Os11g0579200 | ctp-1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |