| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g25457 | 1:6,267,010-6,270,542 | + | C2H1g18702 | CX1g001842 | LOC_Os01g12730 | Os01g0227300 | - | Detail |
| C1H1g25274 | 1:6,271,279-6,273,273 | + | C2H1g07843 | CX1g005082 | LOC_Os01g12740 | Os01g0227400 | - | Detail |
| C1H1g23728 | 1:6,276,049-6,279,054 | + | C2H1g27903 | CX1g001031 | LOC_Os01g12750 | Os01g0227500 | - | Detail |
| C1H1g29841 | 1:6,285,241-6,286,257 | + | C2H1g07762 | CX1g001031 | LOC_Os01g12770 | Os01g0227800 | - | Detail |
| C1H1g01201 | 1:6,286,367-6,286,993 | + | C2H1g29591 | CX1g005082 | LOC_Os01g12760 | Os01g0227700 | - | Detail |
| C1H1g24596 | 1:6,289,912-6,291,847 | + | C2H1g07697 | CX1g001031 | LOC_Os01g12760 | Os01g0227700 | - | Detail |
| C1H1g05848 | 1:6,294,568-6,296,640 | + | C2H1g22175 | CX1g005082 | LOC_Os01g12770 | Os01g0227800 | - | Detail |
| C1H1g29762 | 1:6,303,881-6,307,552 | + | C2H1g18144 | CX1g005755 | LOC_Os01g12790 | Os01g0228200 | - | Detail |
| C1H1g00126 | 1:6,308,090-6,310,983 | - | C2H1g23747 | CX1g000008 | LOC_Os01g12800 | Os01g0228300 | - | Detail |
| C1H1g09783 | 1:6,314,792-6,316,924 | + | C2H1g03627 | CX1g001945 | LOC_Os01g12810 | Os01g0228400 | - | Detail |
| C1H1g01893 | 1:6,317,573-6,319,078 | - | C2H1g17734 | CX1g000835 | LOC_Os01g12820 | Os01g0228500 | - | Detail |
| C1H1g19893 | 1:6,321,348-6,324,876 | - | C2H1g24769 | CX1g004836 | LOC_Os01g12830 | Os01g0228600 | - | Detail |
| C1H1g14653 | 1:6,327,914-6,332,297 | - | C2H1g00699 | CX1g001640 | LOC_Os01g12840 | Os01g0228800 | - | Detail |
| C1H1g26396 | 1:6,340,638-6,348,492 | + | C2H1g15617 | CX1g006490 | LOC_Os01g12860 | Os01g0229000 | - | Detail |
| C1H1g13199 | 1:6,350,226-6,353,655 | - | C2H1g03922 | CX1g006720 | LOC_Os01g12870 | Os01g0229100 | - | Detail |
| C1H1g07711 | 1:6,353,950-6,354,531 | - | C2H1g15811 | - | - | - | - | Detail |
| C1H1g15790 | 1:6,353,989-6,362,163 | + | C2H1g14330 | CX1g003875 | LOC_Os01g12880 | Os01g0229200 | - | Detail |
| C1H1g29443 | 1:6,385,471-6,391,253 | + | C2H1g05009 | CX1g001622 | LOC_Os01g12890 | Os01g0229300 | CCP1, OsEMF1, DFO1, EMF1 | Detail |
| C1H1g08244 | 1:6,391,697-6,393,900 | - | C2H1g10198 | CX1g003284 | LOC_Os01g12900 | Os01g0229400 | RAC1, OsRAC1, OsRac1, Os Rac1 | Detail |
| C1H1g30145 | 1:6,400,300-6,402,272 | + | C2H1g13210 | CX1g003413 | LOC_Os01g12910 | Os01g0229500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g14909 | 4:25,795,793-25,796,804 | + | C1H4g05924 | CX4g033777 | LOC_Os04g50700 | Os04g0593400 | - | Detail |
| C2H4g15239 | 4:25,799,292-25,800,259 | + | C1H4g05924 | CX4g033777 | LOC_Os04g50710 | Os04g0593500 | - | Detail |
| C2H4g23359 | 4:25,803,475-25,808,257 | + | C1H4g15568 | CX4g035875 | LOC_Os04g50720 | Os04g0593600 | - | Detail |
| C2H4g27782 | 4:25,808,778-25,812,733 | + | C1H4g31049 | CX4g035875 | LOC_Os04g50730 | Os04g0593700 | - | Detail |
| C2H4g24933 | 4:25,813,998-25,815,152 | + | C1H4g31049 | CX4g035875 | LOC_Os04g50730 | Os04g0593800 | - | Detail |
| C2H4g01969 | 4:25,815,562-25,818,187 | + | C1H4g31049 | CX4g035875 | LOC_Os04g50740 | Os04g0593600 | - | Detail |
| C2H4g15923 | 4:25,820,139-25,822,952 | - | C1H4g07130 | CX4g032893 | LOC_Os04g50760 | Os04g0594000 | - | Detail |
| C2H4g20252 | 4:25,826,062-25,827,494 | - | C1H4g24489 | CX4g036141 | LOC_Os04g50770 | Os04g0594100 | OsMYB58/63, RRS1 | Detail |
| C2H4g22220 | 4:25,840,544-25,840,933 | + | C1H4g12774 | CX4g032540 | LOC_Os04g50780 | - | - | Detail |
| C2H4g16603 | 4:25,841,774-25,846,519 | - | C1H4g03547 | CX4g032235 | LOC_Os04g50790 | Os04g0594400 | - | Detail |
| C2H4g10373 | 4:25,847,399-25,848,384 | - | C1H4g04447 | - | LOC_Os04g50810 | - | - | Detail |
| C2H4g30113 | 4:25,858,810-25,860,341 | - | C1H4g04447 | CX4g035659 | LOC_Os04g50800 | Os04g0594500 | - | Detail |
| C2H4g08190 | 4:25,861,172-25,861,957 | + | C1H4g17088 | CX4g036126 | LOC_Os04g40470 | Os04g0178400 | CYP99A3 | Detail |
| C2H4g20855 | 4:25,864,567-25,867,327 | + | C1H4g28401 | CX4g035919 | LOC_Os04g50820 | Os04g0594800 | - | Detail |
| C2H4g08661 | 4:25,867,878-25,870,782 | + | C1H4g12708 | CX4g031962 | LOC_Os04g50850 | Os04g0596200 | - | Detail |
| C2H4g13854 | 4:25,870,878-25,873,699 | - | C1H4g13631 | CX4g033700 | LOC_Os04g50860 | Os04g0596300 | - | Detail |
| C2H4g30104 | 4:25,874,640-25,876,517 | - | C1H4g13351 | CX4g035693 | LOC_Os04g50864 | Os04g0596400 | - | Detail |
| C2H4g29365 | 4:25,878,213-25,883,227 | - | C1H4g21153 | CX4g036181 | LOC_Os04g50870 | Os04g0596500 | - | Detail |
| C2H4g17490 | 4:25,890,490-25,892,055 | - | C1H4g02289 | CX4g032928 | LOC_Os04g50880 | Os04g0596900 | - | Detail |
| C2H4g16834 | 4:25,893,251-25,896,980 | - | C1H4g20724 | CX4g034929 | LOC_Os04g50890 | Os04g0597000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |