| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g25457 | 1:6,267,010-6,270,542 | + | C2H1g18702 | CX1g001842 | LOC_Os01g12730 | Os01g0227300 | - | Detail |
| C1H1g25274 | 1:6,271,279-6,273,273 | + | C2H1g07843 | CX1g005082 | LOC_Os01g12740 | Os01g0227400 | - | Detail |
| C1H1g23728 | 1:6,276,049-6,279,054 | + | C2H1g27903 | CX1g001031 | LOC_Os01g12750 | Os01g0227500 | - | Detail |
| C1H1g29841 | 1:6,285,241-6,286,257 | + | C2H1g07762 | CX1g001031 | LOC_Os01g12770 | Os01g0227800 | - | Detail |
| C1H1g01201 | 1:6,286,367-6,286,993 | + | C2H1g29591 | CX1g005082 | LOC_Os01g12760 | Os01g0227700 | - | Detail |
| C1H1g24596 | 1:6,289,912-6,291,847 | + | C2H1g07697 | CX1g001031 | LOC_Os01g12760 | Os01g0227700 | - | Detail |
| C1H1g05848 | 1:6,294,568-6,296,640 | + | C2H1g22175 | CX1g005082 | LOC_Os01g12770 | Os01g0227800 | - | Detail |
| C1H1g29762 | 1:6,303,881-6,307,552 | + | C2H1g18144 | CX1g005755 | LOC_Os01g12790 | Os01g0228200 | - | Detail |
| C1H1g00126 | 1:6,308,090-6,310,983 | - | C2H1g23747 | CX1g000008 | LOC_Os01g12800 | Os01g0228300 | - | Detail |
| C1H1g09783 | 1:6,314,792-6,316,924 | + | C2H1g03627 | CX1g001945 | LOC_Os01g12810 | Os01g0228400 | - | Detail |
| C1H1g01893 | 1:6,317,573-6,319,078 | - | C2H1g17734 | CX1g000835 | LOC_Os01g12820 | Os01g0228500 | - | Detail |
| C1H1g19893 | 1:6,321,348-6,324,876 | - | C2H1g24769 | CX1g004836 | LOC_Os01g12830 | Os01g0228600 | - | Detail |
| C1H1g14653 | 1:6,327,914-6,332,297 | - | C2H1g00699 | CX1g001640 | LOC_Os01g12840 | Os01g0228800 | - | Detail |
| C1H1g26396 | 1:6,340,638-6,348,492 | + | C2H1g15617 | CX1g006490 | LOC_Os01g12860 | Os01g0229000 | - | Detail |
| C1H1g13199 | 1:6,350,226-6,353,655 | - | C2H1g03922 | CX1g006720 | LOC_Os01g12870 | Os01g0229100 | - | Detail |
| C1H1g07711 | 1:6,353,950-6,354,531 | - | C2H1g15811 | - | - | - | - | Detail |
| C1H1g15790 | 1:6,353,989-6,362,163 | + | C2H1g14330 | CX1g003875 | LOC_Os01g12880 | Os01g0229200 | - | Detail |
| C1H1g29443 | 1:6,385,471-6,391,253 | + | C2H1g05009 | CX1g001622 | LOC_Os01g12890 | Os01g0229300 | CCP1, OsEMF1, DFO1, EMF1 | Detail |
| C1H1g08244 | 1:6,391,697-6,393,900 | - | C2H1g10198 | CX1g003284 | LOC_Os01g12900 | Os01g0229400 | RAC1, OsRAC1, OsRac1, Os Rac1 | Detail |
| C1H1g30145 | 1:6,400,300-6,402,272 | + | C2H1g13210 | CX1g003413 | LOC_Os01g12910 | Os01g0229500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g05227 | 3:32,575,990-32,580,536 | + | C1H3g06021 | CX3g029436 | LOC_Os03g63310 | Os03g0850200 | - | Detail |
| C2H3g17725 | 3:32,589,559-32,594,855 | + | C1H3g11487 | CX3g025643 | LOC_Os03g63330 | Os03g0850400 | - | Detail |
| C2H3g10229 | 3:32,599,342-32,600,742 | - | C1H3g23900 | CX3g025502 | LOC_Os03g63360 | Os03g0850600 | - | Detail |
| C2H3g07946 | 3:32,601,789-32,604,702 | - | C1H3g06173 | CX3g027337 | LOC_Os03g63370 | Os03g0850700 | - | Detail |
| C2H3g04851 | 3:32,608,665-32,610,652 | - | C1H3g01400 | CX3g027803 | LOC_Os03g63380 | Os03g0850800 | - | Detail |
| C2H3g19999 | 3:32,611,956-32,614,726 | + | C1H3g21756 | CX3g028883 | LOC_Os03g63400 | Os03g0851000 | - | Detail |
| C2H3g27399 | 3:32,617,185-32,620,934 | - | C1H3g04311 | CX3g025511 | LOC_Os03g63410 | Os03g0851100 | - | Detail |
| C2H3g28237 | 3:32,621,151-32,621,630 | + | C1H3g03955 | CX3g029854 | LOC_Os03g63420 | Os03g0851200 | - | Detail |
| C2H3g01754 | 3:32,623,518-32,627,549 | - | C1H3g18156 | CX3g027614 | LOC_Os03g63430 | Os03g0851300 | - | Detail |
| C2H3g16528 | 3:32,630,489-32,638,736 | + | C1H3g10494 | CX3g026223 | LOC_Os03g63440 | Os03g0851400 | - | Detail |
| C2H3g13556 | 3:32,639,716-32,644,857 | + | C1H3g11947 | CX3g028446 | LOC_Os03g63470 | Os03g0851600 | - | Detail |
| C2H3g27557 | 3:32,645,813-32,648,267 | + | C1H3g29898 | CX3g028446 | LOC_Os03g63480 | Os03g0851700 | Xbos251, XBOS251 | Detail |
| C2H3g08313 | 3:32,649,013-32,651,309 | + | C1H3g20484 | CX3g030221 | LOC_Os03g63490 | Os03g0851800 | - | Detail |
| C2H3g19287 | 3:32,652,490-32,658,988 | - | C1H3g03202 | CX3g031225 | LOC_Os03g63500 | Os03g0851900 | - | Detail |
| C2H3g14849 | 3:32,664,058-32,664,622 | - | C1H3g01639 | CX3g024991 | - | - | - | Detail |
| C2H3g22448 | 3:32,670,873-32,675,183 | - | C1H3g16711 | CX3g029990 | LOC_Os03g63520 | Os03g0852200 | - | Detail |
| C2H3g22869 | 3:32,677,995-32,680,871 | + | C1H3g08912 | CX3g027065 | LOC_Os03g63530 | Os03g0852300 | - | Detail |
| C2H3g22131 | 3:32,684,822-32,686,437 | - | C1H3g05162 | - | LOC_Os03g63550 | Os03g0852500 | - | Detail |
| C2H3g11356 | 3:32,687,020-32,688,191 | + | C1H3g10475 | CX3g031065 | LOC_Os03g63554 | Os03g0852600 | - | Detail |
| C2H3g06256 | 3:32,695,811-32,698,824 | - | C1H3g26435 | CX3g031167 | LOC_Os03g63590 | Os03g0852900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |