| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g04603 | 1:5,989,600-5,994,298 | - | C2H1g00939 | - | - | - | - | Detail |
| C1H1g10595 | 1:6,040,587-6,043,241 | - | C2H1g17446 | CX1g003329 | LOC_Os01g12460 | Os01g0224200 | - | Detail |
| C1H1g28759 | 1:6,043,736-6,045,126 | + | C2H1g06705 | CX1g007058 | LOC_Os01g12464 | Os01g0224300 | - | Detail |
| C1H1g07004 | 1:6,046,920-6,049,789 | + | C2H1g14688 | CX1g001394 | LOC_Os01g12470 | Os01g0224400 | - | Detail |
| C1H1g12177 | 1:6,051,552-6,053,195 | - | C2H1g11914 | CX1g003539 | LOC_Os01g12480 | Os01g0224500 | - | Detail |
| C1H1g07815 | 1:6,068,874-6,071,925 | + | C2H1g03625 | CX1g002397 | LOC_Os01g12490 | Os01g0224700 | YUCCA4, OsYUCCA4, OsYUC4, YUC4 | Detail |
| C1H1g11599 | 1:6,093,803-6,095,860 | - | C2H1g01358 | CX1g005063 | LOC_Os01g12520 | Os01g0225000 | - | Detail |
| C1H1g06137 | 1:6,103,875-6,111,085 | + | C2H1g06869 | CX1g001955 | LOC_Os01g12530 | Os01g0225100 | - | Detail |
| C1H1g01658 | 1:6,112,431-6,119,238 | + | C2H1g08071 | CX1g004081 | LOC_Os01g12540 | Os01g0225200 | - | Detail |
| C1H1g10876 | 1:6,119,514-6,123,943 | + | C2H1g21338 | CX1g000643 | LOC_Os01g12550 | Os01g0225300 | - | Detail |
| C1H1g09440 | 1:6,125,263-6,127,401 | - | C2H1g20462 | CX1g000722 | LOC_Os01g12560 | Os01g0225400 | - | Detail |
| C1H1g18546 | 1:6,128,365-6,130,365 | - | C2H1g08221 | CX1g001058 | LOC_Os01g12570 | Os01g0225500 | - | Detail |
| C1H1g06023 | 1:6,184,979-6,187,554 | + | C2H1g26314 | CX1g004850 | LOC_Os01g12650 | Os01g0226300 | - | Detail |
| C1H1g23194 | 1:6,188,433-6,193,837 | - | C2H1g13868 | CX1g002355 | LOC_Os01g12660 | Os01g0226400 | - | Detail |
| C1H1g24866 | 1:6,196,677-6,202,642 | + | C2H1g02547 | CX1g000068 | LOC_Os01g12670 | Os01g0226500 | - | Detail |
| C1H1g15047 | 1:6,208,060-6,210,523 | + | C2H1g29977 | CX1g004471 | LOC_Os01g12680 | Os01g0226600 | - | Detail |
| C1H1g31834 | 1:6,225,761-6,226,951 | + | C2H1g09030 | CX1g004458 | LOC_Os01g12690 | Os01g0226700 | - | Detail |
| C1H1g16770 | 1:6,242,041-6,248,766 | + | C2H1g01170 | CX1g003495 | LOC_Os01g12710 | Os01g0227100 | - | Detail |
| C1H1g09261 | 1:6,249,653-6,250,603 | + | C2H1g01170 | CX1g003495 | LOC_Os01g15700 | Os01g0527900 | - | Detail |
| C1H1g17285 | 1:6,261,105-6,265,913 | + | C2H1g13949 | CX1g000717 | LOC_Os01g12720 | Os01g0227200 | OsPERK1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g16755 | 5:18,287,166-18,288,263 | + | - | - | LOC_Os01g64020 | Os01g0859500 | OsLG2, rLG2 | Detail |
| C2H5g21089 | 5:18,288,699-18,294,268 | + | C1H5g18939 | CX5g040832 | LOC_Os05g37170 | Os05g0443900 | OsLG2L | Detail |
| C2H5g30678 | 5:18,303,051-18,304,847 | + | C1H5g18403 | CX5g041157 | LOC_Os05g37190 | Os05g0444200 | - | Detail |
| C2H5g05442 | 5:18,316,352-18,319,231 | + | C1H5g26308 | CX5g039100 | LOC_Os05g37200 | Os05g0444300 | - | Detail |
| C2H5g26088 | 5:18,322,017-18,322,445 | + | - | - | - | - | - | Detail |
| C2H5g05266 | 5:18,324,473-18,328,483 | + | C1H5g17523 | CX5g039100 | LOC_Os05g37210 | Os05g0444500 | - | Detail |
| C2H5g02726 | 5:18,329,896-18,330,327 | - | C1H5g21085 | - | - | - | - | Detail |
| C2H5g19880 | 5:18,349,363-18,350,922 | + | C1H5g15251 | CX5g037707 | LOC_Os05g37250 | Os05g0445100 | - | Detail |
| C2H5g22436 | 5:18,362,467-18,364,605 | + | C1H5g10165 | CX5g036986 | LOC_Os05g37330 | Os05g0445500 | - | Detail |
| C2H5g19823 | 5:18,366,471-18,369,397 | + | C1H5g16582 | CX5g039380 | LOC_Os05g37340 | Os05g0445800 | - | Detail |
| C2H5g27548 | 5:18,370,558-18,381,564 | - | C1H5g23261 | CX5g037841 | LOC_Os05g37410 | Os05g0446600 | DNG704 | Detail |
| C2H5g29688 | 5:18,385,929-18,394,026 | - | C1H5g23416 | CX5g040916 | LOC_Os05g37434 | Os05g0446800 | - | Detail |
| C2H5g22596 | 5:18,397,594-18,399,967 | - | C1H5g20294 | CX5g040141 | LOC_Os05g37450 | Os05g0446900 | SBDCP2 | Detail |
| C2H5g12625 | 5:18,402,810-18,404,198 | - | C1H5g12434 | CX5g039543 | LOC_Os01g63800 | Os05g0447000 | - | Detail |
| C2H5g25449 | 5:18,410,080-18,415,878 | - | C1H5g27944 | CX5g036820 | LOC_Os05g37470 | Os05g0447200 | - | Detail |
| C2H5g25292 | 5:18,425,436-18,441,877 | - | C1H5g12420 | CX5g036851 | LOC_Os05g37500 | Os05g0447580 | - | Detail |
| C2H5g15162 | 5:18,445,977-18,448,203 | - | C1H5g24273 | CX5g040386 | LOC_Os05g37520 | Os05g0447700 | - | Detail |
| C2H5g07457 | 5:18,457,491-18,457,937 | + | - | CX5g039654 | LOC_Os05g37530 | Os05g0447800 | - | Detail |
| C2H5g12773 | 5:18,458,025-18,458,369 | + | - | - | - | - | - | Detail |
| C2H5g11261 | 5:18,464,827-18,468,904 | + | C1H5g03822 | CX5g039030 | LOC_Os05g37600 | Os05g0448300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |