| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g04603 | 1:5,989,600-5,994,298 | - | C2H1g00939 | - | - | - | - | Detail |
| C1H1g10595 | 1:6,040,587-6,043,241 | - | C2H1g17446 | CX1g003329 | LOC_Os01g12460 | Os01g0224200 | - | Detail |
| C1H1g28759 | 1:6,043,736-6,045,126 | + | C2H1g06705 | CX1g007058 | LOC_Os01g12464 | Os01g0224300 | - | Detail |
| C1H1g07004 | 1:6,046,920-6,049,789 | + | C2H1g14688 | CX1g001394 | LOC_Os01g12470 | Os01g0224400 | - | Detail |
| C1H1g12177 | 1:6,051,552-6,053,195 | - | C2H1g11914 | CX1g003539 | LOC_Os01g12480 | Os01g0224500 | - | Detail |
| C1H1g07815 | 1:6,068,874-6,071,925 | + | C2H1g03625 | CX1g002397 | LOC_Os01g12490 | Os01g0224700 | YUCCA4, OsYUCCA4, OsYUC4, YUC4 | Detail |
| C1H1g11599 | 1:6,093,803-6,095,860 | - | C2H1g01358 | CX1g005063 | LOC_Os01g12520 | Os01g0225000 | - | Detail |
| C1H1g06137 | 1:6,103,875-6,111,085 | + | C2H1g06869 | CX1g001955 | LOC_Os01g12530 | Os01g0225100 | - | Detail |
| C1H1g01658 | 1:6,112,431-6,119,238 | + | C2H1g08071 | CX1g004081 | LOC_Os01g12540 | Os01g0225200 | - | Detail |
| C1H1g10876 | 1:6,119,514-6,123,943 | + | C2H1g21338 | CX1g000643 | LOC_Os01g12550 | Os01g0225300 | - | Detail |
| C1H1g09440 | 1:6,125,263-6,127,401 | - | C2H1g20462 | CX1g000722 | LOC_Os01g12560 | Os01g0225400 | - | Detail |
| C1H1g18546 | 1:6,128,365-6,130,365 | - | C2H1g08221 | CX1g001058 | LOC_Os01g12570 | Os01g0225500 | - | Detail |
| C1H1g06023 | 1:6,184,979-6,187,554 | + | C2H1g26314 | CX1g004850 | LOC_Os01g12650 | Os01g0226300 | - | Detail |
| C1H1g23194 | 1:6,188,433-6,193,837 | - | C2H1g13868 | CX1g002355 | LOC_Os01g12660 | Os01g0226400 | - | Detail |
| C1H1g24866 | 1:6,196,677-6,202,642 | + | C2H1g02547 | CX1g000068 | LOC_Os01g12670 | Os01g0226500 | - | Detail |
| C1H1g15047 | 1:6,208,060-6,210,523 | + | C2H1g29977 | CX1g004471 | LOC_Os01g12680 | Os01g0226600 | - | Detail |
| C1H1g31834 | 1:6,225,761-6,226,951 | + | C2H1g09030 | CX1g004458 | LOC_Os01g12690 | Os01g0226700 | - | Detail |
| C1H1g16770 | 1:6,242,041-6,248,766 | + | C2H1g01170 | CX1g003495 | LOC_Os01g12710 | Os01g0227100 | - | Detail |
| C1H1g09261 | 1:6,249,653-6,250,603 | + | C2H1g01170 | CX1g003495 | LOC_Os01g15700 | Os01g0527900 | - | Detail |
| C1H1g17285 | 1:6,261,105-6,265,913 | + | C2H1g13949 | CX1g000717 | LOC_Os01g12720 | Os01g0227200 | OsPERK1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g25947 | 1:9,237,227-9,238,700 | - | C1H1g02909 | CX1g001405 | LOC_Os11g02650 | - | - | Detail |
| C2H1g12260 | 1:9,240,388-9,240,864 | - | C1H1g25972 | - | LOC_Os01g13050 | Os01g0861400 | - | Detail |
| C2H1g13264 | 1:9,242,580-9,246,152 | + | C1H1g02936 | CX1g004036 | LOC_Os01g18320 | Os01g0286600 | OsPPO1 | Detail |
| C2H1g18493 | 1:9,260,032-9,263,328 | + | C1H1g02001 | CX1g000296 | LOC_Os01g18360 | Os01g0286900 | - | Detail |
| C2H1g16973 | 1:9,300,519-9,300,707 | + | C1H1g26094 | CX1g002314 | LOC_Os05g04700 | - | - | Detail |
| C2H1g04657 | 1:9,303,104-9,303,481 | - | C1H1g20358 | CX1g007034 | LOC_Os01g18400 | Os01g0287600 | - | Detail |
| C2H1g10428 | 1:9,303,977-9,304,468 | - | C1H1g26001 | CX1g007034 | LOC_Os01g18400 | Os01g0287600 | - | Detail |
| C2H1g21581 | 1:9,332,228-9,332,588 | - | C1H1g01375 | CX1g005603 | LOC_Os01g18450 | Os01g0288200 | - | Detail |
| C2H1g03324 | 1:9,346,774-9,347,076 | - | C1H1g15975 | - | LOC_Os01g18490 | Os01g0288800 | - | Detail |
| C2H1g30606 | 1:9,356,690-9,356,998 | - | C1H1g15975 | CX1g006610 | LOC_Os01g18530 | Os01g0289100 | - | Detail |
| C2H1g28353 | 1:9,359,956-9,360,261 | - | C1H1g15975 | CX1g006610 | LOC_Os01g18530 | Os01g0289100 | - | Detail |
| C2H1g00434 | 1:9,390,275-9,396,795 | + | C1H1g27658 | CX1g004171 | LOC_Os01g18584 | Os01g0289600 | - | Detail |
| C2H1g15794 | 1:9,410,669-9,412,142 | - | C1H1g31040 | CX1g002453 | LOC_Os01g18620 | Os01g0289900 | - | Detail |
| C2H1g01894 | 1:9,427,709-9,431,055 | - | C1H1g10493 | - | LOC_Os01g17080 | - | - | Detail |
| C2H1g23760 | 1:9,431,767-9,433,279 | - | C1H1g09358 | CX1g003482 | LOC_Os01g18620 | Os01g0289900 | - | Detail |
| C2H1g28620 | 1:9,434,748-9,438,379 | - | C1H1g20536 | CX1g007116 | LOC_Os01g18630 | Os01g0290000 | - | Detail |
| C2H1g18032 | 1:9,442,152-9,443,594 | - | C1H1g06449 | CX1g001189 | LOC_Os01g18640 | Os01g0290100 | OsLCD1 | Detail |
| C2H1g16260 | 1:9,448,085-9,449,515 | + | C1H1g00431 | CX1g003793 | LOC_Os01g18660 | Os01g0290600 | OsLCD2, OsCS1 | Detail |
| C2H1g08075 | 1:9,454,121-9,460,331 | - | C1H1g25669 | CX1g004035 | LOC_Os01g18670 | Os01g0290700 | - | Detail |
| C2H1g01408 | 1:9,467,543-9,469,804 | + | C1H1g05215 | CX1g000749 | LOC_Os11g10490 | Os01g0807000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |