| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H11g26778 | 11:20,889,274-20,889,933 | + | - | - | - | Os11g0615350 | - | Detail |
| C1H11g15093 | 11:20,891,708-20,892,111 | + | - | - | - | - | - | Detail |
| C1H11g11245 | 11:20,896,546-20,897,133 | + | C2H11g01653 | CX11g013156 | LOC_Os11g40130 | Os11g0615600 | - | Detail |
| C1H11g03854 | 11:20,902,565-20,906,118 | - | C2H11g25760 | CX11g014535 | LOC_Os11g41170 | Os11g0629550 | - | Detail |
| C1H11g26250 | 11:20,906,864-20,913,262 | + | C2H11g26738 | CX11g014392 | LOC_Os11g39320 | Os11g0462500 | - | Detail |
| C1H11g31325 | 11:20,917,405-20,919,353 | - | - | - | LOC_Os11g40920 | - | - | Detail |
| C1H11g22217 | 11:20,933,221-20,937,380 | - | C2H11g01261 | CX11g012669 | LOC_Os11g40140 | Os11g0615700 | - | Detail |
| C1H11g28672 | 11:20,937,709-20,940,538 | + | C2H11g18801 | CX11g013323 | LOC_Os11g40150 | Os11g0615800 | RAD51A1, OsRAD51A1 | Detail |
| C1H11g28247 | 11:20,943,392-20,947,555 | + | C2H11g30075 | CX11g011100 | LOC_Os11g40160 | Os11g0615900 | - | Detail |
| C1H11g23219 | 11:20,952,531-20,955,727 | + | C2H11g18620 | - | LOC_Os11g40200 | Os11g0616200 | - | Detail |
| C1H11g23473 | 11:20,959,322-20,963,231 | - | C2H11g22802 | CX11g013727 | LOC_Os11g40210 | Os11g0616300 | - | Detail |
| C1H11g13783 | 11:20,991,034-20,994,873 | + | C2H11g05511 | CX11g011435 | LOC_Os11g40410 | Os11g0619500 | - | Detail |
| C1H11g01395 | 11:20,998,702-21,001,284 | - | C2H11g11245 | CX11g012889 | LOC_Os11g40380 | Os11g0618300 | - | Detail |
| C1H11g27499 | 11:21,008,485-21,010,971 | - | C2H11g25897 | CX11g012047 | LOC_Os11g40400 | Os11g0618600 | - | Detail |
| C1H11g06391 | 11:21,016,588-21,023,051 | - | - | - | - | - | - | Detail |
| C1H11g08297 | 11:21,023,804-21,028,553 | - | C2H11g21973 | CX11g014885 | LOC_Os11g40420 | Os11g0618850 | - | Detail |
| C1H11g00535 | 11:21,044,742-21,047,321 | + | - | - | - | - | - | Detail |
| C1H11g18980 | 11:21,046,036-21,048,399 | - | C2H11g05511 | CX11g011435 | LOC_Os11g40450 | Os11g0619500 | - | Detail |
| C1H11g23475 | 11:21,048,528-21,049,934 | - | C2H11g05511 | CX11g011435 | LOC_Os11g40450 | Os11g0618500 | - | Detail |
| C1H11g02549 | 11:21,055,921-21,056,541 | + | - | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g18098 | 4:22,366,357-22,367,357 | + | C1H4g27983 | CX4g036341 | LOC_Os04g43710 | Os04g0517500 | - | Detail |
| C2H4g25250 | 4:22,371,472-22,373,949 | - | C1H4g02633 | CX4g031725 | LOC_Os04g43730 | Os04g0517700 | - | Detail |
| C2H4g17137 | 4:22,383,999-22,387,231 | - | C1H4g03662 | CX4g034141 | LOC_Os04g54890 | Os02g0517900 | - | Detail |
| C2H4g28659 | 4:22,395,708-22,396,055 | + | - | CX4g031509 | LOC_Os04g43740 | Os04g0517900 | - | Detail |
| C2H4g18845 | 4:22,398,118-22,401,716 | - | C1H4g21239 | CX4g032795 | LOC_Os04g43750 | Os04g0518000 | - | Detail |
| C2H4g17450 | 4:22,406,282-22,409,267 | - | C1H4g17678 | CX4g031424 | LOC_Os04g43760 | Os04g0518100 | - | Detail |
| C2H4g28869 | 4:22,415,229-22,417,846 | - | C1H4g22637 | CX4g031711 | LOC_Os04g43800 | Os04g0518400 | OsPAL6 | Detail |
| C2H4g10523 | 4:22,426,478-22,429,294 | - | C1H4g07857 | - | LOC_Os04g43824 | Os04g0518650 | - | Detail |
| C2H4g12982 | 4:22,438,115-22,441,881 | + | C1H4g21094 | CX4g035278 | LOC_Os04g43840 | Os04g0518800 | LABA1, LOGL6, OsLOGL6, An-2 | Detail |
| C2H4g03913 | 4:22,457,073-22,459,758 | + | C1H4g30028 | CX4g031681 | LOC_Os04g43910 | Os04g0519700 | ARF10, qSE4 | Detail |
| C2H4g13261 | 4:22,466,807-22,478,296 | - | C1H4g09015 | CX4g033896 | LOC_Os04g43916 | Os04g0519900 | - | Detail |
| C2H4g00328 | 4:22,479,350-22,483,931 | - | C1H4g07978 | CX4g033084 | LOC_Os04g43922 | Os04g0520000 | - | Detail |
| C2H4g21426 | 4:22,490,205-22,490,729 | - | - | CX4g032805 | LOC_Os04g43990 | Os04g0520700 | OsS40-13 | Detail |
| C2H4g11598 | 4:22,496,349-22,497,743 | + | C1H4g05728 | CX4g034414 | LOC_Os04g44030 | Os04g0520900 | - | Detail |
| C2H4g13133 | 4:22,504,372-22,506,431 | + | C1H4g29455 | CX4g032514 | LOC_Os04g44060 | Os04g0521100 | OsPIP2;3 | Detail |
| C2H4g21649 | 4:22,507,177-22,507,470 | - | C1H4g20974 | - | - | - | - | Detail |
| C2H4g30421 | 4:22,507,757-22,508,776 | - | C1H4g01962 | - | - | - | - | Detail |
| C2H4g17426 | 4:22,510,893-22,512,892 | + | C1H4g05956 | CX4g034857 | LOC_Os04g44070 | Os04g0521300 | - | Detail |
| C2H4g25112 | 4:22,513,844-22,516,546 | + | C1H4g04229 | CX4g032134 | LOC_Os04g44090 | Os04g0521600 | - | Detail |
| C2H4g09903 | 4:22,517,122-22,517,592 | + | - | CX4g032134 | LOC_Os04g44100 | Os04g0521700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |