| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H11g23130 | 11:19,386,333-19,389,265 | + | C2H11g24934 | CX11g012511 | LOC_Os11g37100 | Os11g0580000 | - | Detail |
| C1H11g00092 | 11:19,393,361-19,395,663 | + | C2H11g17000 | CX11g013679 | LOC_Os11g37110 | Os11g0231800 | - | Detail |
| C1H11g28292 | 11:19,398,324-19,403,428 | - | C2H11g01102 | CX11g014142 | LOC_Os11g37120 | Os11g0580500 | - | Detail |
| C1H11g12578 | 11:19,407,244-19,409,656 | - | C2H11g23038 | CX11g013934 | LOC_Os11g37130 | Os11g0580800 | - | Detail |
| C1H11g24186 | 11:19,428,205-19,430,811 | - | C2H11g26998 | CX11g014891 | LOC_Os11g37330 | Os11g0583200 | - | Detail |
| C1H11g09030 | 11:19,442,621-19,445,535 | - | C2H11g18715 | CX11g013436 | LOC_Os11g37280 | Os11g0582500 | OSC6, Osc6, Osg6B, OsG6B, OsLTPG25, OsLTPg25, OsLtpVII.1, Os C6, C6 | Detail |
| C1H11g28092 | 11:19,447,150-19,448,199 | + | C2H11g08283 | CX11g013075 | LOC_Os11g37270 | Os11g0582400 | - | Detail |
| C1H11g08738 | 11:19,449,934-19,457,019 | - | C2H11g29225 | CX11g011204 | LOC_Os11g37260 | Os11g0582300 | - | Detail |
| C1H11g21581 | 11:19,462,771-19,463,031 | + | C2H11g01637 | CX11g014633 | - | Os11g0582100 | - | Detail |
| C1H11g25944 | 11:19,466,322-19,467,099 | + | C2H11g25233 | CX11g014127 | LOC_Os11g37210 | Os11g0582000 | - | Detail |
| C1H11g24383 | 11:19,468,772-19,469,322 | + | C2H11g25233 | CX11g014127 | LOC_Os11g37210 | Os11g0582000 | - | Detail |
| C1H11g06517 | 11:19,470,792-19,473,990 | - | C2H11g21820 | CX11g012664 | LOC_Os11g37200 | Os11g0581900 | - | Detail |
| C1H11g11900 | 11:19,484,273-19,486,985 | - | C2H11g06568 | - | LOC_Os11g37190 | Os11g0581700 | OsEPFL7 | Detail |
| C1H11g29379 | 11:19,496,978-19,500,677 | + | C2H11g30019 | CX11g013112 | LOC_Os11g37510 | Os11g0585700 | - | Detail |
| C1H11g15811 | 11:19,507,978-19,513,422 | + | C2H11g02296 | CX11g014040 | LOC_Os11g37520 | Os11g0585900 | - | Detail |
| C1H11g28872 | 11:19,516,157-19,565,384 | + | C2H11g07928 | CX11g012778 | LOC_Os11g37540 | Os11g0586100 | Xa46(t) | Detail |
| C1H11g05180 | 11:19,565,677-19,566,674 | - | C2H11g29167 | CX11g014801 | LOC_Os11g37550 | Os11g0586200 | - | Detail |
| C1H11g02737 | 11:19,567,399-19,570,837 | - | C2H11g27585 | CX11g014870 | LOC_Os11g37560 | Os11g0586300 | OsLESV, FLO9 | Detail |
| C1H11g06719 | 11:19,575,124-19,578,017 | + | C2H11g13343 | CX11g011943 | LOC_Os11g37640 | Os11g0586900 | - | Detail |
| C1H11g31000 | 11:19,580,279-19,585,641 | + | C2H11g29893 | CX11g012852 | - | Os11g0587000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g19834 | 2:25,897,490-25,898,188 | + | C1H2g17371 | CX2g019917 | LOC_Os02g45880 | Os02g0684000 | - | Detail |
| C2H2g12350 | 2:25,906,290-25,907,369 | - | C1H2g00614 | CX2g020719 | LOC_Os02g45890 | Os02g0684100 | - | Detail |
| C2H2g27051 | 2:25,916,250-25,919,973 | - | C1H2g03932 | CX2g020860 | LOC_Os02g45910 | Os02g0684150 | OsDNA2_15 | Detail |
| C2H2g04078 | 2:25,923,590-25,928,192 | + | C1H2g09273 | CX2g021780 | LOC_Os02g45920 | Os02g0684300 | - | Detail |
| C2H2g07890 | 2:25,928,444-25,929,087 | - | C1H2g23248 | CX2g023573 | LOC_Os02g45930 | Os02g0684400 | - | Detail |
| C2H2g23208 | 2:25,933,967-25,934,278 | - | C1H2g07518 | CX2g023547 | LOC_Os02g45940 | Os02g0684500 | - | Detail |
| C2H2g03417 | 2:25,934,838-25,937,935 | + | C1H2g17890 | CX2g023866 | LOC_Os02g45950 | Os02g0684600 | - | Detail |
| C2H2g24497 | 2:25,938,557-25,939,423 | + | C1H2g27881 | CX2g019320 | - | - | - | Detail |
| C2H2g17403 | 2:25,946,401-25,952,525 | + | C1H2g27343 | CX2g023375 | LOC_Os02g45980 | Os02g0684900 | - | Detail |
| C2H2g16948 | 2:25,953,171-25,953,797 | + | - | - | - | - | - | Detail |
| C2H2g07817 | 2:25,957,041-25,957,384 | + | C1H2g11465 | CX7g047983 | - | Os02g0117400 | - | Detail |
| C2H2g27686 | 2:25,963,024-25,965,649 | - | C1H2g24305 | CX2g019726 | LOC_Os02g46030 | Os02g0685200 | OsMyb1R, LHY-like_chr.2, CMYB1 | Detail |
| C2H2g27892 | 2:25,976,877-25,979,425 | - | C1H2g27920 | CX2g023473 | LOC_Os02g46080 | Os02g0685600 | - | Detail |
| C2H2g03411 | 2:25,981,902-25,987,049 | + | C1H2g28250 | CX2g020113 | LOC_Os02g46090 | Os02g0685900 | OsCPK5 | Detail |
| C2H2g19134 | 2:25,991,362-25,991,931 | - | C1H2g26668 | CX2g020098 | LOC_Os02g46100 | Os02g0686100 | OsATL32 | Detail |
| C2H2g06457 | 2:25,999,464-26,003,538 | - | C1H2g04547 | CX2g020840 | LOC_Os02g46120 | Os02g0686300 | - | Detail |
| C2H2g09278 | 2:26,003,711-26,008,957 | + | C1H2g29736 | CX2g022035 | LOC_Os02g46130 | Os02g0686400 | - | Detail |
| C2H2g01630 | 2:26,011,921-26,012,752 | + | C1H2g13130 | CX2g023233 | LOC_Os02g46140 | Os02g0686500 | - | Detail |
| C2H2g28721 | 2:26,013,006-26,017,407 | - | C1H2g25245 | CX2g022938 | LOC_Os02g46150 | Os02g0686600 | - | Detail |
| C2H2g18789 | 2:26,024,379-26,024,747 | - | C1H2g26309 | CX2g019053 | LOC_Os02g46190 | Os02g0686700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |