| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H11g01371 | 11:18,869,859-18,874,327 | + | C2H11g09477 | CX11g014448 | LOC_Os11g35840 | Os11g0560900 | - | Detail |
| C1H11g12501 | 11:18,880,962-18,882,947 | + | C2H11g16600 | CX11g011007 | LOC_Os11g30810 | Os11g0503900 | - | Detail |
| C1H11g15827 | 11:18,896,732-18,898,124 | + | C2H11g07163 | CX11g010958 | LOC_Os11g35930 | Os11g0566800 | OsCHS28 | Detail |
| C1H11g05196 | 11:18,937,834-18,939,411 | + | C2H11g18258 | CX11g012075 | LOC_Os11g35930 | Os11g0566800 | OsCHS28 | Detail |
| C1H11g25031 | 11:18,966,649-18,969,614 | - | C2H11g14780 | CX11g012826 | LOC_Os11g36030 | Os11g0568300 | - | Detail |
| C1H11g07031 | 11:18,974,638-18,975,081 | + | C2H11g15085 | CX11g014099 | LOC_Os11g36050 | Os11g0568500 | - | Detail |
| C1H11g26260 | 11:18,976,022-18,980,556 | + | C2H11g09728 | CX11g012110 | LOC_Os11g36060 | Os11g0568600 | - | Detail |
| C1H11g06089 | 11:18,984,671-18,989,669 | + | C2H11g23880 | CX11g014538 | LOC_Os11g36070 | Os11g0568700 | - | Detail |
| C1H11g21320 | 11:18,992,846-18,998,709 | + | C2H11g20593 | CX11g014220 | LOC_Os11g36090 | Os11g0569800 | - | Detail |
| C1H11g07726 | 11:19,001,976-19,002,989 | + | C2H11g00400 | CX11g013497 | LOC_Os11g36140 | Os11g0569300 | - | Detail |
| C1H11g31161 | 11:19,012,900-19,016,496 | + | C2H11g01638 | CX11g012210 | LOC_Os11g35500 | Os11g0570000 | COG1 | Detail |
| C1H11g16496 | 11:19,047,163-19,051,175 | + | C2H11g15178 | CX11g012442 | LOC_Os11g36340 | Os11g0571900 | - | Detail |
| C1H11g22846 | 11:19,053,134-19,062,941 | + | C2H11g29311 | CX11g012542 | LOC_Os11g36390 | Os11g0572100 | - | Detail |
| C1H11g03106 | 11:19,081,478-19,084,887 | - | C2H11g25750 | CX11g011256 | LOC_Os11g36410 | Os11g0572301 | - | Detail |
| C1H11g20066 | 11:19,088,465-19,092,380 | + | C2H11g02062 | CX11g014441 | LOC_Os11g36420 | Os11g0572400 | - | Detail |
| C1H11g00394 | 11:19,092,866-19,097,924 | - | C2H11g14097 | CX11g013970 | LOC_Os11g36430 | Os11g0572500 | - | Detail |
| C1H11g01914 | 11:19,098,538-19,102,365 | + | C2H11g11863 | CX11g011357 | LOC_Os11g36440 | Os11g0572700 | OsCRTISO, MHZ5, MHZ5/CRTISO, CRTISO | Detail |
| C1H11g18936 | 11:19,103,515-19,105,923 | - | C2H11g13422 | CX11g011222 | LOC_Os11g36450 | Os11g0572800 | JMJ710 | Detail |
| C1H11g19358 | 11:19,109,087-19,116,757 | - | C2H11g26770 | CX11g010869 | - | - | - | Detail |
| C1H11g13497 | 11:19,118,039-19,122,436 | - | C2H11g29389 | CX11g010869 | LOC_Os11g36890 | Os11g0577350 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g13429 | 5:2,984,898-2,998,636 | + | C1H5g15255 | CX5g040180 | LOC_Os05g06690 | Os05g0159000 | - | Detail |
| C2H5g10674 | 5:3,002,564-3,005,221 | + | C1H5g29215 | CX5g036830 | LOC_Os05g06700 | Os05g0159100 | - | Detail |
| C2H5g18018 | 5:3,006,382-3,008,711 | - | C1H5g24999 | CX5g040661 | LOC_Os05g06710 | Os05g0159200 | - | Detail |
| C2H5g16806 | 5:3,009,521-3,009,991 | - | C1H5g24999 | CX5g040661 | LOC_Os05g06710 | Os05g0159200 | - | Detail |
| C2H5g19257 | 5:3,012,387-3,019,849 | - | C1H5g19191 | CX5g037735 | LOC_Os05g06720 | Os05g0159300 | DARX1, GELP62 | Detail |
| C2H5g24095 | 5:3,036,603-3,040,225 | + | C1H5g26427 | CX5g036773 | LOC_Os05g06750 | Os05g0160000 | - | Detail |
| C2H5g30095 | 5:3,041,598-3,044,973 | + | C1H5g22506 | CX5g040221 | LOC_Os05g06760 | Os05g0160100 | - | Detail |
| C2H5g06168 | 5:3,050,182-3,051,081 | - | C1H5g10936 | CX5g038772 | LOC_Os05g06780 | Os05g0160300 | - | Detail |
| C2H5g24726 | 5:3,058,466-3,068,570 | + | C1H5g01032 | CX5g039426 | LOC_Os05g06814 | Os05g0160600 | - | Detail |
| C2H5g04837 | 5:3,101,156-3,106,489 | - | C1H5g16939 | CX5g039426 | LOC_Os05g06910 | Os05g0160600 | - | Detail |
| C2H5g14563 | 5:3,107,589-3,110,784 | - | C1H5g08386 | CX5g038917 | LOC_Os05g06814 | Os05g0161400 | - | Detail |
| C2H5g12914 | 5:3,120,434-3,125,033 | + | C1H5g11456 | CX5g036690 | LOC_Os05g06840 | Os05g0160800 | - | Detail |
| C2H5g20736 | 5:3,134,414-3,138,292 | + | C1H5g17757 | - | LOC_Os05g06890 | Os05g0161200 | OsCRSH1 | Detail |
| C2H5g24812 | 5:3,141,666-3,143,431 | - | - | - | - | - | - | Detail |
| C2H5g07576 | 5:3,143,472-3,148,402 | + | C1H5g28932 | CX5g039426 | LOC_Os05g06910 | Os05g0161400 | - | Detail |
| C2H5g24440 | 5:3,157,934-3,160,415 | + | C1H5g24444 | - | LOC_Os05g06920 | Os05g0161500 | OsCRSH2 | Detail |
| C2H5g21538 | 5:3,178,857-3,181,093 | + | C1H5g10245 | - | LOC_Os05g06940 | Os05g0161800 | OsCRSH3 | Detail |
| C2H5g10505 | 5:3,186,528-3,188,625 | - | C1H5g04552 | CX5g038822 | LOC_Os05g06970 | Os05g0162000 | - | Detail |
| C2H5g18624 | 5:3,193,191-3,204,066 | - | C1H5g19592 | CX5g040374 | LOC_Os05g06980 | Os05g0162200 | - | Detail |
| C2H5g07564 | 5:3,218,387-3,221,336 | - | C1H5g00882 | CX5g040436 | LOC_Os05g07000 | Os05g0162600 | OsRS2Z39 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |