| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H11g21359 | 11:17,806,114-17,809,413 | - | C2H11g00637 | CX11g010943 | LOC_Os11g35500 | Os11g0559200 | - | Detail |
| C1H11g16719 | 11:17,815,015-17,815,679 | + | C2H11g05674 | CX11g014806 | LOC_Os11g33450 | Os11g0540800 | - | Detail |
| C1H11g28267 | 11:17,824,784-17,828,244 | + | C2H5g11046 | - | LOC_Os04g43110 | - | - | Detail |
| C1H11g26863 | 11:17,879,646-17,884,918 | + | C2H11g27497 | CX11g014806 | LOC_Os11g33970 | Os11g0541600 | - | Detail |
| C1H11g29632 | 11:17,957,071-17,960,317 | + | C2H11g07300 | CX11g014128 | LOC_Os11g34090 | Os11g0543300 | - | Detail |
| C1H11g08520 | 11:17,961,414-17,967,928 | - | C2H11g26315 | CX11g012363 | LOC_Os11g34110 | Os11g0543500 | - | Detail |
| C1H11g13052 | 11:17,975,457-17,987,941 | - | C2H11g16135 | CX11g013182 | LOC_Os11g34120 | Os11g0543800 | - | Detail |
| C1H11g17270 | 11:17,989,759-17,993,400 | + | C2H11g01008 | CX11g014418 | LOC_Os11g34130 | Os11g0544000 | - | Detail |
| C1H11g31594 | 11:17,993,282-17,995,568 | - | C2H11g30272 | CX11g013253 | LOC_Os11g34140 | Os11g0544100 | - | Detail |
| C1H11g13720 | 11:17,997,596-18,001,419 | - | C2H11g24756 | CX11g011652 | LOC_Os11g34150 | Os11g0544200 | - | Detail |
| C1H11g08599 | 11:18,005,282-18,008,489 | - | C2H11g25805 | CX11g012362 | LOC_Os11g34160 | Os11g0544300 | - | Detail |
| C1H11g02103 | 11:18,011,130-18,017,676 | - | C2H11g01819 | CX11g011501 | LOC_Os11g34180 | Os11g0544500 | - | Detail |
| C1H11g30920 | 11:18,021,573-18,028,504 | + | C2H11g00305 | CX11g011448 | LOC_Os11g34190 | Os11g0544600 | - | Detail |
| C1H11g27494 | 11:18,029,747-18,032,976 | + | C2H11g18307 | CX11g014690 | LOC_Os11g34200 | Os11g0544700 | OsDrAp1 | Detail |
| C1H11g15105 | 11:18,033,592-18,038,476 | - | C2H11g08032 | CX11g013605 | LOC_Os11g34210 | Os11g0544800 | GATB, OsGatB, GatB | Detail |
| C1H11g06148 | 11:18,040,378-18,042,440 | - | C2H11g01963 | CX11g011818 | LOC_Os11g34230 | Os11g0545000 | - | Detail |
| C1H11g17540 | 11:18,063,592-18,072,399 | - | C2H11g15889 | - | LOC_Os11g34300 | Os11g0545600 | - | Detail |
| C1H11g27853 | 11:18,075,007-18,081,562 | - | C2H11g09476 | CX11g012033 | LOC_Os11g34310 | Os11g0545700 | - | Detail |
| C1H11g29595 | 11:18,084,219-18,090,182 | - | C2H11g07840 | CX11g011277 | LOC_Os11g34320 | Os11g0545800 | - | Detail |
| C1H11g24653 | 11:18,093,885-18,099,068 | + | C2H11g22777 | CX11g012629 | LOC_Os11g34350 | Os11g0546000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g19013 | 4:17,293,022-17,293,321 | + | C1H4g13967 | CX4g035834 | LOC_Os04g33560 | Os04g0411200 | - | Detail |
| C2H4g14818 | 4:17,296,776-17,297,201 | + | C1H4g02095 | CX4g035203 | - | - | - | Detail |
| C2H4g06840 | 4:17,306,701-17,308,226 | - | C1H4g06511 | CX4g034096 | LOC_Os04g33570 | Os04g0411400 | RCN4 | Detail |
| C2H4g13082 | 4:17,316,644-17,317,192 | + | C1H4g03675 | - | LOC_Os04g33580 | - | - | Detail |
| C2H4g18183 | 4:17,333,834-17,339,321 | + | C1H4g04480 | CX4g034692 | LOC_Os04g33590 | Os04g0411800 | - | Detail |
| C2H4g17971 | 4:17,341,591-17,346,361 | + | C1H4g04480 | CX4g035360 | LOC_Os04g33600 | Os04g0412000 | - | Detail |
| C2H4g01788 | 4:17,353,943-17,354,566 | + | C1H4g02994 | CX4g035334 | LOC_Os04g33610 | Os04g0412100 | OsBIC1 | Detail |
| C2H4g00589 | 4:17,361,858-17,362,316 | + | C1H4g08221 | CX4g033895 | LOC_Os04g33630 | Os04g0412200 | - | Detail |
| C2H4g24079 | 4:17,367,073-17,382,578 | + | C1H4g08556 | CX4g035419 | LOC_Os04g33660 | Os04g0412500 | - | Detail |
| C2H4g20884 | 4:17,389,543-17,390,328 | + | - | CX2g021594 | LOC_Os04g33670 | Os04g0412700 | - | Detail |
| C2H4g11928 | 4:17,391,230-17,392,576 | + | - | CX4g034454 | LOC_Os04g33680 | Os04g0412800 | - | Detail |
| C2H4g27573 | 4:17,393,756-17,404,376 | + | C1H4g15980 | CX4g035285 | LOC_Os04g33690 | Os04g0412900 | - | Detail |
| C2H4g17905 | 4:17,404,580-17,408,996 | - | C1H4g11558 | CX4g032656 | LOC_Os04g33700 | Os04g0413000 | - | Detail |
| C2H4g06805 | 4:17,411,768-17,414,162 | + | C1H4g31098 | CX4g033899 | LOC_Os04g33720 | Os04g0413200 | OsCIN3 | Detail |
| C2H4g13973 | 4:17,418,965-17,424,157 | + | C1H4g06839 | CX4g035303 | LOC_Os04g33740 | Os04g0413500 | GIF1, gif1, CIN2, OsCIN2, OsGIF1, WB1 | Detail |
| C2H4g25683 | 4:17,446,668-17,450,629 | + | C1H4g19252 | CX4g031791 | LOC_Os04g33770 | Os04g0414000 | - | Detail |
| C2H4g24793 | 4:17,453,525-17,458,645 | + | C1H4g03882 | CX4g033946 | LOC_Os04g33780 | Os04g0414100 | - | Detail |
| C2H4g26864 | 4:17,465,526-17,466,491 | + | C1H4g02836 | CX4g034105 | LOC_Os04g33810 | Os04g0414300 | - | Detail |
| C2H4g04832 | 4:17,475,265-17,477,957 | + | C1H4g11612 | CX4g031478 | LOC_Os04g33830 | Os04g0414700 | - | Detail |
| C2H4g14107 | 4:17,489,153-17,489,745 | - | C1H4g11357 | CX4g032373 | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |