| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g09690 | 1:5,646,191-5,652,258 | + | C2H1g00290 | CX1g005289 | LOC_Os01g11860 | Os01g0217500 | - | Detail |
| C1H1g24673 | 1:5,655,098-5,657,830 | + | C2H1g04999 | CX1g006272 | LOC_Os01g11880 | Os01g0217800 | - | Detail |
| C1H1g21326 | 1:5,666,351-5,678,186 | + | C2H1g26585 | CX1g006867 | LOC_Os01g11900 | Os01g0218032 | ROS1A, ROS1a, OsROS1, TA2 | Detail |
| C1H1g12724 | 1:5,686,581-5,687,544 | + | C2H1g12652 | CX1g003932 | LOC_Os01g11910 | Os01g0218100 | - | Detail |
| C1H1g09961 | 1:5,697,241-5,702,329 | + | C2H1g17909 | CX1g004539 | LOC_Os01g11920 | Os01g0218200 | - | Detail |
| C1H1g30290 | 1:5,714,019-5,719,150 | + | C2H1g10690 | CX1g000608 | LOC_Os01g11940 | Os01g0218500 | - | Detail |
| C1H1g21863 | 1:5,720,849-5,726,981 | - | C2H1g22932 | CX1g003540 | LOC_Os01g11946 | Os01g0218700 | - | Detail |
| C1H1g28664 | 1:5,727,357-5,740,639 | - | C2H1g17937 | CX1g000915 | LOC_Os01g11960 | Os01g0218900 | - | Detail |
| C1H1g00514 | 1:5,752,538-5,753,281 | + | C2H1g09244 | CX1g004702 | LOC_Os01g11970 | Os01g0219000 | - | Detail |
| C1H1g27900 | 1:5,754,392-5,756,984 | + | C2H1g22718 | CX1g003171 | LOC_Os01g11980 | Os01g0219100 | - | Detail |
| C1H1g26992 | 1:5,757,879-5,760,734 | + | C2H1g24979 | CX1g000508 | LOC_Os01g11990 | Os01g0219200 | ZYGO1 | Detail |
| C1H1g22028 | 1:5,770,051-5,770,540 | + | C2H1g07180 | CX1g005007 | LOC_Os01g12020 | Os01g0219500 | OsLTPL18 | Detail |
| C1H1g09843 | 1:5,770,963-5,773,415 | - | C2H1g00052 | CX1g005138 | LOC_Os01g12030 | Os01g0219600 | - | Detail |
| C1H1g29203 | 1:5,784,452-5,785,325 | - | C2H1g03412 | CX1g005599 | LOC_Os01g12070 | Os01g0220100 | OsCel9A | Detail |
| C1H1g27823 | 1:5,787,226-5,790,470 | - | C2H1g03412 | CX1g005599 | LOC_Os01g12070 | Os01g0220100 | OsCel9A | Detail |
| C1H1g03057 | 1:5,794,359-5,799,394 | - | C2H1g01177 | CX1g001222 | LOC_Os01g12080 | Os01g0220200 | - | Detail |
| C1H1g21223 | 1:5,806,314-5,809,542 | + | C2H1g26925 | CX1g003024 | LOC_Os01g12090 | Os01g0220300 | - | Detail |
| C1H1g15416 | 1:5,810,071-5,810,571 | - | C2H1g24533 | - | LOC_Os01g12100 | Os01g0220400 | - | Detail |
| C1H1g25550 | 1:5,814,056-5,815,182 | - | C2H1g24521 | CX1g004887 | LOC_Os01g12110 | Os01g0220500 | - | Detail |
| C1H1g19821 | 1:5,830,205-5,830,851 | + | C2H1g00971 | CX1g004493 | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g18571 | 1:4,167,260-4,172,828 | - | C1H1g23164 | CX1g006611 | LOC_Os01g09320 | Os01g0188400 | - | Detail |
| C2H1g07051 | 1:4,187,189-4,188,730 | - | C1H1g21487 | CX1g005693 | LOC_Os01g09340 | Os01g0189800 | - | Detail |
| C2H1g19316 | 1:4,192,265-4,194,425 | + | C1H1g03578 | CX1g004426 | LOC_Os01g09430 | Os01g0190000 | - | Detail |
| C2H1g02810 | 1:4,207,300-4,209,445 | + | C1H1g27201 | CX1g006201 | LOC_Os01g09450 | Os01g0190300 | - | Detail |
| C2H1g19091 | 1:4,210,865-4,213,365 | - | C1H1g07672 | CX1g007213 | LOC_Os01g09460 | Os01g0190400 | - | Detail |
| C2H1g26000 | 1:4,218,704-4,220,436 | + | C1H1g15113 | CX1g004108 | LOC_Os01g09470 | Os01g0190500 | GW5L | Detail |
| C2H1g13703 | 1:4,239,252-4,240,246 | - | C1H1g00997 | CX1g002686 | LOC_Os01g09510 | Os01g0191100 | - | Detail |
| C2H1g17347 | 1:4,243,081-4,245,020 | + | C1H1g00651 | CX1g000313 | LOC_Os01g09500 | Os01g0191000 | - | Detail |
| C2H1g04431 | 1:4,245,232-4,246,882 | - | C1H1g26240 | CX1g000803 | LOC_Os01g09540 | Os01g0191200 | - | Detail |
| C2H1g28549 | 1:4,253,317-4,258,907 | - | C1H1g18220 | CX1g002554 | LOC_Os01g09550 | Os01g0191300 | OsNAC006 | Detail |
| C2H1g26380 | 1:4,264,411-4,269,800 | + | C1H1g10376 | CX1g003362 | LOC_Os01g09560 | Os01g0191500 | - | Detail |
| C2H1g02135 | 1:4,278,247-4,282,036 | + | C1H1g21626 | CX1g007135 | LOC_Os01g09570 | Os01g0191700 | - | Detail |
| C2H1g00634 | 1:4,282,968-4,286,087 | - | C1H1g30896 | CX1g004403 | LOC_Os01g09580 | Os01g0191800 | - | Detail |
| C2H1g29230 | 1:4,292,304-4,293,544 | - | C1H1g20220 | CX1g007052 | LOC_Os01g09590 | Os01g0191900 | Os2R_MYB4 | Detail |
| C2H1g26016 | 1:4,309,638-4,310,816 | - | - | CX1g001237 | LOC_Os01g09620 | Os01g0192000 | - | Detail |
| C2H1g07972 | 1:4,335,591-4,337,113 | - | C1H1g28550 | CX1g000801 | LOC_Os01g09640 | Os01g0192300 | - | Detail |
| C2H1g22157 | 1:4,342,766-4,343,488 | + | - | CX1g004357 | LOC_Os01g09665 | Os01g0192550 | - | Detail |
| C2H1g16065 | 1:4,344,135-4,347,256 | - | C1H1g14238 | CX1g006171 | LOC_Os01g09670 | Os01g0192600 | - | Detail |
| C2H1g19735 | 1:4,364,421-4,366,310 | - | C1H1g11184 | CX1g005144 | LOC_Os01g09700 | Os01g0192900 | OS-ACS5 | Detail |
| C2H1g05922 | 1:4,392,896-4,393,498 | - | C1H1g11184 | CX1g005144 | LOC_Os01g09700 | Os01g0192900 | OS-ACS5 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |