| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H11g16532 | 11:16,053,130-16,058,840 | - | C2H11g25408 | CX11g014983 | LOC_Os11g31110 | Os11g0507400 | - | Detail |
| C1H11g15164 | 11:16,111,774-16,112,364 | + | C2H11g13604 | CX11g012879 | - | - | - | Detail |
| C1H11g21216 | 11:16,113,877-16,120,585 | + | C2H11g13604 | CX11g012879 | - | - | - | Detail |
| C1H11g17370 | 11:16,149,556-16,151,978 | - | C2H11g14886 | CX11g014845 | LOC_Os11g31190 | Os11g0508600 | 11N3, OsSWEET14, Os11N3, Os-11N3, Xa41(t) | Detail |
| C1H11g16566 | 11:16,162,482-16,163,044 | - | C2H11g10237 | - | - | - | - | Detail |
| C1H11g06724 | 11:16,202,676-16,204,577 | + | C2H11g01178 | CX11g013912 | LOC_Os11g31330 | Os11g0512000 | ONAC025, SS1, SS1/ ONAC025 | Detail |
| C1H11g14895 | 11:16,208,549-16,210,657 | + | C2H11g11640 | CX11g013912 | LOC_Os11g31340 | Os11g0512100 | ONAC127 | Detail |
| C1H11g00143 | 11:16,215,384-16,217,643 | + | C2H11g24382 | CX11g012563 | LOC_Os11g31360 | Os11g0512200 | - | Detail |
| C1H11g30952 | 11:16,225,859-16,227,790 | + | C2H11g26741 | CX11g012563 | LOC_Os11g31380 | Os11g0512600 | ONAC129 | Detail |
| C1H11g16256 | 11:16,235,394-16,235,957 | + | C2H11g02622 | CX11g011889 | LOC_Os11g31400 | Os11g0512800 | - | Detail |
| C1H11g13788 | 11:16,279,833-16,287,162 | - | C2H11g28267 | - | LOC_Os11g31480 | Os11g0514000 | stvb-j, Stvb-i, ST07i | Detail |
| C1H11g31406 | 11:16,290,511-16,292,333 | - | C2H11g17850 | - | LOC_Os11g31500 | Os11g0514100 | ST01 | Detail |
| C1H11g25036 | 11:16,311,767-16,318,364 | - | C2H11g12230 | - | LOC_Os11g31500 | Os11g0514100 | ST01 | Detail |
| C1H11g13468 | 11:16,323,194-16,324,939 | - | C2H11g16761 | CX11g011925 | LOC_Os11g31530 | Os11g0514400 | OsBDG1 | Detail |
| C1H11g20188 | 11:16,327,412-16,329,269 | - | C2H11g06028 | CX11g012210 | LOC_Os11g31540 | Os11g0514500 | - | Detail |
| C1H11g17248 | 11:16,331,703-16,334,974 | - | C2H11g15333 | - | LOC_Os11g31550 | Os11g0514700 | - | Detail |
| C1H11g12770 | 11:16,342,008-16,344,148 | - | C2H11g09633 | CX11g011925 | LOC_Os11g31560 | Os11g0514700 | - | Detail |
| C1H11g00181 | 11:16,346,776-16,349,225 | - | C2H11g24919 | CX11g011127 | LOC_Os11g31570 | Os11g0514800 | - | Detail |
| C1H11g12316 | 11:16,398,711-16,403,783 | - | C2H11g22300 | CX11g012537 | LOC_Os11g31620 | Os11g0515500 | FBL55, OsAFB3 | Detail |
| C1H11g04814 | 11:16,417,601-16,421,779 | + | C2H11g28111 | CX11g013257 | LOC_Os11g31640 | Os11g0516000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g11776 | 4:25,433,671-25,435,470 | - | C1H4g16820 | CX4g033099 | LOC_Os04g49610 | Os04g0585600 | - | Detail |
| C2H4g11266 | 4:25,439,551-25,441,167 | - | C1H4g09246 | - | LOC_Os04g49620 | Os04g0585700 | - | Detail |
| C2H4g30476 | 4:25,454,543-25,455,145 | - | C1H4g08474 | - | LOC_Os04g49650 | Os04g0585900 | - | Detail |
| C2H4g22317 | 4:25,459,080-25,459,563 | - | C1H4g14819 | - | LOC_Os04g49660 | Os04g0586000 | - | Detail |
| C2H4g15562 | 4:25,470,204-25,470,497 | - | C1H4g30549 | - | LOC_Os04g49670 | Os04g0586100 | - | Detail |
| C2H4g24989 | 4:25,473,648-25,473,968 | - | C1H4g10022 | - | LOC_Os04g49680 | Os04g0586200 | - | Detail |
| C2H4g18410 | 4:25,488,355-25,489,884 | + | C1H4g24641 | CX4g034550 | LOC_Os04g49690 | Os04g0586500 | - | Detail |
| C2H4g01934 | 4:25,493,577-25,494,656 | + | C1H4g23703 | CX4g033100 | LOC_Os04g49700 | Os04g0586700 | - | Detail |
| C2H4g07006 | 4:25,498,695-25,499,261 | + | - | CX4g036093 | LOC_Os04g49720 | Os04g0587100 | OsINVINH3 | Detail |
| C2H4g20832 | 4:25,500,676-25,501,236 | + | - | CX4g036093 | LOC_Os04g49730 | Os04g0587200 | OsPMEI20 | Detail |
| C2H4g02957 | 4:25,503,576-25,507,184 | + | C1H4g07526 | CX4g035244 | LOC_Os04g49739 | Os04g0587300 | - | Detail |
| C2H4g30591 | 4:25,509,655-25,512,306 | + | C1H4g28454 | CX4g035249 | LOC_Os04g49757 | Os04g0587500 | - | Detail |
| C2H4g11072 | 4:25,517,585-25,518,430 | - | - | CX4g034789 | LOC_Os04g49850 | Os04g0588000 | - | Detail |
| C2H4g10754 | 4:25,521,440-25,531,640 | + | C1H4g11735 | CX4g034668 | LOC_Os04g49860 | Os04g0588200 | OsDNA2_1 | Detail |
| C2H4g21457 | 4:25,532,796-25,534,466 | + | C1H4g26119 | CX4g033123 | LOC_Os04g49870 | Os04g0588350 | - | Detail |
| C2H4g16752 | 4:25,544,587-25,552,061 | + | C1H4g17218 | CX4g033335 | LOC_Os04g49890 | Os04g0588700 | - | Detail |
| C2H4g03312 | 4:25,555,113-25,561,966 | + | C1H4g26451 | CX4g033761 | LOC_Os04g49900 | Os04g0588700 | - | Detail |
| C2H4g21025 | 4:25,582,957-25,584,895 | + | C1H4g17761 | CX4g035587 | LOC_Os04g49940 | Os04g0589200 | - | Detail |
| C2H4g11578 | 4:25,612,721-25,613,421 | + | C1H4g24594 | CX4g031423 | - | - | - | Detail |
| C2H4g03333 | 4:25,638,848-25,641,001 | + | - | CX4g033306 | - | Os04g0589400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |