| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H11g16532 | 11:16,053,130-16,058,840 | - | C2H11g25408 | CX11g014983 | LOC_Os11g31110 | Os11g0507400 | - | Detail |
| C1H11g15164 | 11:16,111,774-16,112,364 | + | C2H11g13604 | CX11g012879 | - | - | - | Detail |
| C1H11g21216 | 11:16,113,877-16,120,585 | + | C2H11g13604 | CX11g012879 | - | - | - | Detail |
| C1H11g17370 | 11:16,149,556-16,151,978 | - | C2H11g14886 | CX11g014845 | LOC_Os11g31190 | Os11g0508600 | 11N3, OsSWEET14, Os11N3, Os-11N3, Xa41(t) | Detail |
| C1H11g16566 | 11:16,162,482-16,163,044 | - | C2H11g10237 | - | - | - | - | Detail |
| C1H11g06724 | 11:16,202,676-16,204,577 | + | C2H11g01178 | CX11g013912 | LOC_Os11g31330 | Os11g0512000 | ONAC025, SS1, SS1/ ONAC025 | Detail |
| C1H11g14895 | 11:16,208,549-16,210,657 | + | C2H11g11640 | CX11g013912 | LOC_Os11g31340 | Os11g0512100 | ONAC127 | Detail |
| C1H11g00143 | 11:16,215,384-16,217,643 | + | C2H11g24382 | CX11g012563 | LOC_Os11g31360 | Os11g0512200 | - | Detail |
| C1H11g30952 | 11:16,225,859-16,227,790 | + | C2H11g26741 | CX11g012563 | LOC_Os11g31380 | Os11g0512600 | ONAC129 | Detail |
| C1H11g16256 | 11:16,235,394-16,235,957 | + | C2H11g02622 | CX11g011889 | LOC_Os11g31400 | Os11g0512800 | - | Detail |
| C1H11g13788 | 11:16,279,833-16,287,162 | - | C2H11g28267 | - | LOC_Os11g31480 | Os11g0514000 | stvb-j, Stvb-i, ST07i | Detail |
| C1H11g31406 | 11:16,290,511-16,292,333 | - | C2H11g17850 | - | LOC_Os11g31500 | Os11g0514100 | ST01 | Detail |
| C1H11g25036 | 11:16,311,767-16,318,364 | - | C2H11g12230 | - | LOC_Os11g31500 | Os11g0514100 | ST01 | Detail |
| C1H11g13468 | 11:16,323,194-16,324,939 | - | C2H11g16761 | CX11g011925 | LOC_Os11g31530 | Os11g0514400 | OsBDG1 | Detail |
| C1H11g20188 | 11:16,327,412-16,329,269 | - | C2H11g06028 | CX11g012210 | LOC_Os11g31540 | Os11g0514500 | - | Detail |
| C1H11g17248 | 11:16,331,703-16,334,974 | - | C2H11g15333 | - | LOC_Os11g31550 | Os11g0514700 | - | Detail |
| C1H11g12770 | 11:16,342,008-16,344,148 | - | C2H11g09633 | CX11g011925 | LOC_Os11g31560 | Os11g0514700 | - | Detail |
| C1H11g00181 | 11:16,346,776-16,349,225 | - | C2H11g24919 | CX11g011127 | LOC_Os11g31570 | Os11g0514800 | - | Detail |
| C1H11g12316 | 11:16,398,711-16,403,783 | - | C2H11g22300 | CX11g012537 | LOC_Os11g31620 | Os11g0515500 | FBL55, OsAFB3 | Detail |
| C1H11g04814 | 11:16,417,601-16,421,779 | + | C2H11g28111 | CX11g013257 | LOC_Os11g31640 | Os11g0516000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g22656 | 3:7,805,508-7,809,963 | + | C1H3g07562 | CX3g024983 | LOC_Os03g16080 | Os03g0267700 | - | Detail |
| C2H3g06739 | 3:7,809,195-7,813,979 | - | C1H3g17372 | CX3g027806 | LOC_Os03g16090 | Os03g0267800 | HDR3 | Detail |
| C2H3g07700 | 3:7,823,472-7,827,013 | + | C1H3g04069 | CX3g026311 | LOC_Os03g16110 | Os03g0268000 | - | Detail |
| C2H3g30042 | 3:7,832,021-7,835,431 | - | C1H3g00060 | CX3g028752 | LOC_Os03g16120 | Os03g0268100 | - | Detail |
| C2H3g28116 | 3:7,838,285-7,843,948 | - | C1H3g17480 | CX3g026518 | LOC_Os03g16130 | Os03g0268200 | - | Detail |
| C2H3g23231 | 3:7,845,483-7,848,104 | - | C1H3g03581 | CX3g027084 | LOC_Os03g16140 | Os03g0268300 | - | Detail |
| C2H3g04060 | 3:7,851,684-7,855,092 | - | C1H3g26709 | CX3g026984 | LOC_Os03g16150 | Os03g0268400 | - | Detail |
| C2H3g09098 | 3:7,863,562-7,865,569 | - | C1H3g06011 | CX3g029114 | LOC_Os03g16170 | Os03g0268600 | - | Detail |
| C2H3g08488 | 3:7,873,345-7,875,616 | - | C1H3g02392 | CX3g025893 | LOC_Os03g16210 | Os03g0268900 | - | Detail |
| C2H3g11149 | 3:7,878,461-7,880,829 | - | C1H3g25433 | CX3g025893 | LOC_Os03g16220 | Os03g0269000 | - | Detail |
| C2H3g13848 | 3:7,883,000-7,884,692 | - | C1H3g14634 | CX3g030778 | LOC_Os03g16230 | Os03g0269100 | - | Detail |
| C2H3g30194 | 3:7,885,536-7,888,304 | - | C1H3g28190 | CX3g025228 | LOC_Os03g16260 | Os03g0269300 | - | Detail |
| C2H3g10990 | 3:7,894,181-7,896,570 | + | C1H3g05319 | CX3g030432 | LOC_Os03g16290 | Os03g0269700 | OsSSR1 | Detail |
| C2H3g12278 | 3:7,901,647-7,905,366 | + | C1H3g25495 | CX3g028676 | LOC_Os03g16334 | Os03g0269900 | - | Detail |
| C2H3g26039 | 3:7,911,493-7,912,269 | + | C1H3g15219 | CX3g030836 | LOC_Os03g16350 | Os03g0270000 | OsAHL7 | Detail |
| C2H3g09590 | 3:7,919,731-7,926,039 | - | C1H3g02158 | - | LOC_Os03g16369 | Os03g0270200 | - | Detail |
| C2H3g23864 | 3:7,922,946-7,923,374 | + | C1H3g05957 | CX3g031331 | - | Os03g0270300 | - | Detail |
| C2H3g17998 | 3:7,932,138-7,933,559 | - | C1H3g05634 | CX3g029608 | LOC_Os03g16390 | Os03g0270500 | - | Detail |
| C2H3g10987 | 3:7,937,716-7,941,557 | + | C1H3g18450 | CX3g031177 | LOC_Os03g16400 | Os01g0103800 | - | Detail |
| C2H3g15886 | 3:7,941,989-7,942,462 | - | C1H3g20566 | CX3g029680 | LOC_Os03g16410 | Os03g0270800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |