| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H11g25557 | 11:15,749,241-15,749,648 | - | C2H11g22910 | CX11g014792 | LOC_Os11g30370 | Os11g0496600 | - | Detail |
| C1H11g09915 | 11:15,773,627-15,774,320 | + | C2H11g12093 | CX11g012613 | - | - | - | Detail |
| C1H11g16319 | 11:15,780,583-15,787,055 | + | C2H11g14273 | CX11g014085 | LOC_Os11g30410 | Os11g0497000 | OsSAE1a | Detail |
| C1H11g25643 | 11:15,812,926-15,815,269 | + | C2H11g22898 | CX11g012527 | LOC_Os11g30484 | Os11g0498400 | - | Detail |
| C1H11g27815 | 11:15,820,827-15,821,713 | + | C2H11g13934 | CX11g012799 | LOC_Os11g30500 | Os11g0498600 | - | Detail |
| C1H11g08228 | 11:15,855,816-15,864,029 | + | C2H11g29258 | CX11g013443 | LOC_Os11g30560 | Os11g0499600 | - | Detail |
| C1H11g25372 | 11:15,892,494-15,893,002 | + | C2H11g26398 | CX11g012607 | LOC_Os11g30760 | Os11g0502700 | - | Detail |
| C1H11g05886 | 11:15,913,226-15,920,331 | + | C2H11g26777 | CX11g013520 | LOC_Os11g30790 | Os11g0503400 | - | Detail |
| C1H11g21889 | 11:15,923,190-15,923,681 | + | C2H11g16582 | CX11g010910 | LOC_Os11g30810 | Os11g0503900 | - | Detail |
| C1H11g08735 | 11:15,924,188-15,924,835 | + | C2H11g16582 | CX11g010910 | LOC_Os11g30810 | Os11g0503900 | - | Detail |
| C1H11g27107 | 11:15,927,933-15,928,478 | + | C2H11g13181 | CX11g010910 | LOC_Os11g30830 | Os11g0504900 | - | Detail |
| C1H11g18860 | 11:15,931,659-15,937,116 | + | C2H11g04701 | CX11g012967 | - | - | - | Detail |
| C1H11g30898 | 11:15,942,075-15,945,173 | + | C2H11g04191 | - | - | - | - | Detail |
| C1H11g04694 | 11:15,954,724-15,954,989 | + | C2H11g00265 | - | - | - | - | Detail |
| C1H11g22326 | 11:15,956,029-15,957,118 | + | C2H11g03682 | CX11g013108 | LOC_Os11g30910 | Os11g0505300 | STV11, OsSOT1 | Detail |
| C1H11g18981 | 11:15,992,245-15,993,382 | - | C2H11g12950 | CX11g012904 | - | - | - | Detail |
| C1H11g04733 | 11:15,995,549-15,996,340 | - | C2H11g07707 | CX11g013034 | LOC_Os11g31070 | Os11g0506300 | - | Detail |
| C1H11g01433 | 11:16,020,079-16,022,560 | - | C2H11g24452 | CX11g011882 | - | - | - | Detail |
| C1H11g28049 | 11:16,038,713-16,041,285 | + | C2H11g19133 | CX11g014596 | LOC_Os11g31090 | Os11g0507200 | - | Detail |
| C1H11g02002 | 11:16,043,150-16,049,272 | - | C2H11g00051 | CX11g011414 | LOC_Os11g31100 | Os11g0507300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g25229 | 4:15,794,678-15,801,442 | + | C1H4g16826 | CX4g032461 | LOC_Os04g31330 | Os04g0382200 | EXO70F3, OsEXO70F3, OsExo70F3, OrysaF3_Exo70, OsExo70-F3, Exo70-F3 | Detail |
| C2H4g08291 | 4:15,804,992-15,811,254 | - | C1H4g08250 | CX4g033731 | LOC_Os04g31340 | Os04g0382300 | - | Detail |
| C2H4g21907 | 4:15,824,605-15,830,076 | + | C1H4g23640 | CX4g033213 | LOC_Os04g31390 | Os04g0382700 | - | Detail |
| C2H4g11523 | 4:15,836,091-15,839,486 | + | C1H4g29507 | CX4g031504 | LOC_Os04g31400 | Os04g0382800 | - | Detail |
| C2H4g17370 | 4:15,913,333-15,914,224 | + | - | - | - | - | - | Detail |
| C2H4g25485 | 4:15,931,863-15,933,250 | - | C1H4g27689 | CX4g031500 | LOC_Os04g31610 | Os04g0385600 | - | Detail |
| C2H4g09951 | 4:15,993,743-15,994,288 | + | C1H4g28157 | CX4g036232 | LOC_Os04g31670 | Os04g0386300 | - | Detail |
| C2H4g19704 | 4:16,003,534-16,005,941 | + | C1H4g01776 | CX4g034133 | LOC_Os04g31690 | Os04g0386500 | - | Detail |
| C2H4g09573 | 4:16,006,671-16,011,720 | - | C1H4g26815 | CX4g031487 | LOC_Os04g31700 | Os04g0386600 | - | Detail |
| C2H4g14766 | 4:16,012,438-16,013,706 | + | C1H4g21589 | CX4g036353 | LOC_Os04g31710 | Os04g0386700 | - | Detail |
| C2H4g24192 | 4:16,016,241-16,016,962 | - | C1H4g05500 | CX4g032722 | LOC_Os04g31730 | Os04g0386900 | - | Detail |
| C2H4g21209 | 4:16,039,785-16,039,997 | + | C1H4g13044 | CX4g034278 | LOC_Os04g31804 | Os04g0387300 | - | Detail |
| C2H4g17117 | 4:16,052,858-16,056,057 | + | C1H4g13813 | CX4g031777 | LOC_Os04g31790 | Os04g0387300 | - | Detail |
| C2H4g01397 | 4:16,061,878-16,080,060 | + | C1H4g20734 | CX4g031777 | LOC_Os04g31804 | Os04g0387300 | - | Detail |
| C2H4g11321 | 4:16,090,868-16,092,505 | + | C1H4g27855 | CX4g036291 | LOC_Os04g31880 | Os04g0388000 | - | Detail |
| C2H4g19348 | 4:16,122,233-16,129,901 | + | C1H4g11099 | CX4g033923 | LOC_Os04g31900 | Os04g0388500 | - | Detail |
| C2H4g18326 | 4:16,130,559-16,133,214 | - | C1H4g07543 | CX4g035641 | LOC_Os04g31910 | Os04g0388601 | - | Detail |
| C2H4g10433 | 4:16,140,780-16,145,134 | + | C1H4g09954 | CX4g031743 | LOC_Os04g31924 | Os04g0388700 | - | Detail |
| C2H4g06056 | 4:16,147,299-16,150,489 | + | C1H4g09321 | CX4g034542 | LOC_Os04g31940 | Os04g0388800 | - | Detail |
| C2H4g16596 | 4:16,152,682-16,155,851 | - | C1H4g17922 | CX4g034481 | LOC_Os04g31950 | Os04g0388900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |