| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H11g17585 | 11:14,655,902-14,659,115 | - | C2H11g23712 | CX11g012079 | LOC_Os11g28530 | Os11g0474800 | OsDTC2, OsKS8, OsKSL8 | Detail |
| C1H11g20376 | 11:14,706,687-14,708,705 | - | C2H11g04744 | CX11g011709 | - | - | - | Detail |
| C1H11g15513 | 11:14,730,646-14,733,463 | + | C2H11g26477 | - | - | - | - | Detail |
| C1H11g28807 | 11:14,828,119-14,830,364 | + | C2H11g19542 | CX11g014811 | LOC_Os11g28910 | - | - | Detail |
| C1H11g20098 | 11:14,863,971-14,864,759 | + | C2H11g11493 | CX11g011635 | LOC_Os11g28940 | Os11g0479000 | - | Detail |
| C1H11g28558 | 11:14,872,767-14,875,014 | - | C2H11g01202 | CX11g010946 | LOC_Os11g28950 | Os11g0479100 | - | Detail |
| C1H11g15225 | 11:14,879,248-14,880,351 | - | C2H11g01202 | CX11g010946 | LOC_Os11g28950 | Os11g0479100 | - | Detail |
| C1H11g07027 | 11:14,896,510-14,904,056 | + | C2H11g15927 | CX11g012468 | LOC_Os11g28980 | Os11g0479232 | - | Detail |
| C1H11g00739 | 11:14,907,939-14,912,921 | + | C2H11g26216 | CX11g013696 | LOC_Os11g28990 | Os11g0479300 | - | Detail |
| C1H11g14827 | 11:14,927,608-14,931,608 | + | C2H11g17613 | CX11g014028 | LOC_Os11g29110 | Os11g0481150 | - | Detail |
| C1H11g29340 | 11:14,933,483-14,939,207 | - | C2H11g03259 | CX11g014019 | LOC_Os11g29120 | Os11g0481200 | - | Detail |
| C1H11g14983 | 11:14,957,832-14,981,487 | + | C2H11g03891 | CX11g014052 | LOC_Os11g29150 | Os11g0481600 | - | Detail |
| C1H11g16656 | 11:14,985,367-14,990,697 | - | C2H11g20744 | CX11g013230 | LOC_Os11g29190 | Os11g0482000 | - | Detail |
| C1H11g19605 | 11:14,994,070-15,006,297 | + | C2H11g05462 | CX11g012684 | LOC_Os11g29200 | Os11g0482100 | - | Detail |
| C1H11g28413 | 11:15,006,832-15,008,439 | - | C2H11g19108 | CX11g013737 | - | Os11g0482200 | - | Detail |
| C1H11g31744 | 11:15,012,236-15,014,974 | + | C2H11g08765 | CX11g012846 | LOC_Os11g29230 | Os11g0482400 | - | Detail |
| C1H11g27137 | 11:15,017,603-15,022,921 | - | C2H11g07778 | CX11g010897 | LOC_Os11g29240 | Os11g0482500 | - | Detail |
| C1H11g01471 | 11:15,048,236-15,049,924 | + | C2H11g18072 | CX11g014481 | LOC_Os11g29290 | Os11g0483000 | HAN1 | Detail |
| C1H11g27214 | 11:15,074,272-15,074,761 | + | C2H11g03463 | CX11g014537 | LOC_Os11g29340 | Os11g0483600 | - | Detail |
| C1H11g27393 | 11:15,093,359-15,097,225 | + | C2H11g15778 | CX11g013818 | LOC_Os11g29350 | Os11g0483900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g00465 | 4:21,949,305-21,949,736 | - | C1H4g16892 | - | LOC_Os04g42850 | - | - | Detail |
| C2H4g23428 | 4:21,955,992-21,961,795 | + | C1H4g02011 | CX4g033250 | LOC_Os04g42860 | Os04g0507700 | - | Detail |
| C2H4g12434 | 4:21,962,396-21,964,296 | - | C1H4g25437 | CX4g036242 | LOC_Os04g42870 | Os04g0507800 | - | Detail |
| C2H4g04255 | 4:21,964,471-21,966,166 | + | C1H4g05518 | CX4g032853 | LOC_Os04g42880 | Os04g0507900 | - | Detail |
| C2H4g13577 | 4:21,969,979-21,970,602 | - | - | CX4g035638 | LOC_Os04g42889 | - | - | Detail |
| C2H4g02916 | 4:21,971,608-21,974,671 | - | C1H4g12307 | CX4g033139 | LOC_Os04g42900 | Os04g0508000 | - | Detail |
| C2H4g04232 | 4:21,975,336-21,978,353 | + | C1H4g06876 | CX4g032690 | LOC_Os04g42910 | Os04g0508100 | - | Detail |
| C2H4g05860 | 4:21,979,292-21,984,831 | + | C1H4g08533 | CX4g033875 | LOC_Os04g42920 | Os04g0508200 | - | Detail |
| C2H4g05577 | 4:21,986,204-21,988,757 | + | C1H4g17316 | CX4g035105 | LOC_Os04g42930 | Os04g0508300 | OsGrxC2.2 | Detail |
| C2H4g08577 | 4:21,989,395-21,990,537 | - | - | CX4g036552 | LOC_Os04g42940 | Os04g0508400 | - | Detail |
| C2H4g24307 | 4:21,993,729-21,995,690 | - | C1H4g28976 | CX4g036081 | LOC_Os04g42950 | Os04g0508500 | Os2R_MYB45 | Detail |
| C2H4g01800 | 4:22,005,104-22,006,447 | + | C1H2g19268 | CX4g034855 | LOC_Os04g42960 | Os04g0508600 | - | Detail |
| C2H4g15606 | 4:22,010,532-22,014,498 | - | C1H4g09744 | CX4g031554 | LOC_Os04g42980 | Os04g0508800 | - | Detail |
| C2H4g18756 | 4:22,019,614-22,023,317 | - | C1H4g09860 | CX4g035042 | LOC_Os04g42990 | Os04g0508900 | - | Detail |
| C2H4g21092 | 4:22,032,568-22,038,012 | + | C1H4g03726 | CX4g031481 | LOC_Os04g43020 | Os04g0509000 | - | Detail |
| C2H4g17989 | 4:22,038,821-22,046,565 | + | C1H4g25656 | CX4g035238 | LOC_Os04g43030 | Os04g0509100 | - | Detail |
| C2H4g25209 | 4:22,046,130-22,049,928 | - | C1H4g05629 | CX4g036052 | LOC_Os04g43040 | Os04g0509200 | - | Detail |
| C2H4g20441 | 4:22,052,563-22,073,010 | - | C1H4g11981 | CX4g034232 | LOC_Os04g43050 | Os04g0509300 | DCL4, OsDCL4, Os DCL4, Dcl4 | Detail |
| C2H4g11339 | 4:22,075,791-22,076,232 | + | C1H4g16776 | CX4g036588 | LOC_Os04g43060 | Os04g0509400 | - | Detail |
| C2H4g01906 | 4:22,082,684-22,084,180 | + | C1H4g16652 | CX2g024932 | LOC_Os04g43070 | Os04g0509600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |