| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g05723 | 1:5,501,344-5,507,720 | + | C2H1g27065 | CX1g004005 | LOC_Os01g11580 | Os01g0214300 | - | Detail |
| C1H1g20464 | 1:5,507,899-5,510,117 | + | C2H1g13662 | CX1g001697 | LOC_Os01g11590 | Os01g0214400 | - | Detail |
| C1H1g07596 | 1:5,512,294-5,512,640 | + | C2H1g29223 | CX1g002606 | LOC_Os01g11600 | Os01g0214500 | - | Detail |
| C1H1g31450 | 1:5,518,263-5,521,616 | + | C2H1g17558 | CX1g003813 | LOC_Os01g11620 | Os01g0214600 | - | Detail |
| C1H1g01706 | 1:5,527,863-5,532,464 | + | C2H1g00701 | CX1g003813 | LOC_Os01g11650 | Os01g0214800 | - | Detail |
| C1H1g22226 | 1:5,544,762-5,545,329 | + | C2H1g14450 | CX1g007036 | LOC_Os01g11660 | Os01g0215000 | - | Detail |
| C1H1g20267 | 1:5,550,076-5,551,414 | + | C2H1g02903 | CX1g001022 | LOC_Os01g11670 | Os01g0215100 | - | Detail |
| C1H1g24683 | 1:5,552,888-5,554,271 | + | C2H1g14703 | CX1g003813 | LOC_Os01g11700 | Os01g0215500 | - | Detail |
| C1H1g11193 | 1:5,562,764-5,565,545 | + | C2H1g12816 | CX1g003813 | LOC_Os01g11710 | Os01g0215700 | - | Detail |
| C1H1g26872 | 1:5,594,846-5,597,215 | + | C2H1g10285 | CX1g003813 | LOC_Os01g11730 | Os01g0216000 | - | Detail |
| C1H1g06984 | 1:5,597,524-5,597,844 | + | C2H1g10285 | CX1g006438 | LOC_Os01g11730 | Os01g0216000 | - | Detail |
| C1H1g24880 | 1:5,602,991-5,607,750 | + | C2H1g21387 | CX1g003813 | LOC_Os01g11740 | Os01g0216300 | - | Detail |
| C1H1g19866 | 1:5,613,042-5,615,314 | + | C2H1g23772 | CX1g003813 | LOC_Os01g11750 | Os01g0216400 | - | Detail |
| C1H1g19122 | 1:5,617,212-5,619,427 | + | C2H1g22830 | CX1g003813 | LOC_Os01g11760 | Os01g0216500 | - | Detail |
| C1H1g31618 | 1:5,621,209-5,625,075 | + | C2H1g08002 | CX1g003813 | LOC_Os01g11790 | Os01g0216900 | - | Detail |
| C1H1g11369 | 1:5,625,674-5,629,305 | - | C2H1g01657 | CX1g002873 | LOC_Os01g11810 | Os01g0217000 | - | Detail |
| C1H1g25421 | 1:5,632,815-5,633,875 | - | C2H1g27711 | CX1g001632 | LOC_Os01g11830 | Os01g0347600 | - | Detail |
| C1H1g15985 | 1:5,637,770-5,638,288 | + | C2H1g08464 | CX1g005713 | LOC_Os01g11840 | Os01g0348000 | - | Detail |
| C1H1g14222 | 1:5,638,351-5,638,950 | + | C2H1g19219 | CX1g005713 | LOC_Os01g11840 | Os01g0347600 | - | Detail |
| C1H1g06189 | 1:5,639,684-5,642,504 | - | C2H1g05180 | CX1g000279 | LOC_Os01g11850 | Os01g0217400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g14560 | 9:18,510,240-18,511,177 | - | - | - | - | Os09g0551000 | - | Detail |
| C2H9g15560 | 9:18,511,260-18,519,351 | - | C1H9g00756 | CX9g057667 | LOC_Os09g37834 | Os09g0551000 | - | Detail |
| C2H9g18567 | 9:18,519,786-18,522,730 | - | C1H9g00756 | CX9g057667 | LOC_Os09g37840 | Os09g0551201 | SDK1 | Detail |
| C2H9g30036 | 9:18,524,325-18,526,305 | - | C1H9g14993 | CX9g057667 | LOC_Os09g37840 | Os09g0551201 | SDK1 | Detail |
| C2H9g10203 | 9:18,526,418-18,530,520 | - | C1H9g14993 | CX9g057667 | LOC_Os09g37840 | Os09g0551251 | SDK11 | Detail |
| C2H9g23601 | 9:18,536,271-18,541,647 | + | C1H9g23922 | CX9g055805 | LOC_Os09g37860 | Os09g0551300 | - | Detail |
| C2H9g18325 | 9:18,549,604-18,553,469 | + | C1H9g22027 | CX9g057667 | LOC_Os09g37840 | Os09g0551400 | SDRLK-42 | Detail |
| C2H9g05665 | 9:18,554,819-18,560,466 | - | C1H9g23767 | CX9g057667 | LOC_Os09g37840 | Os09g0551500 | SDRLK-43 | Detail |
| C2H9g09248 | 9:18,564,920-18,566,709 | + | C1H9g20157 | CX9g055996 | LOC_Os09g37910 | Os09g0551600 | - | Detail |
| C2H9g00765 | 9:18,568,706-18,576,273 | - | C1H9g09501 | CX9g055169 | LOC_Os09g37920 | Os09g0551800 | - | Detail |
| C2H9g18827 | 9:18,576,747-18,585,978 | - | C1H9g15933 | CX9g057646 | LOC_Os09g37930 | - | - | Detail |
| C2H9g26371 | 9:18,591,347-18,594,122 | - | C1H9g08089 | CX9g054990 | LOC_Os09g37949 | Os09g0552300 | - | Detail |
| C2H9g23182 | 9:18,597,456-18,599,241 | - | C1H9g25273 | CX9g055948 | LOC_Os09g37958 | Os09g0552600 | - | Detail |
| C2H9g28554 | 9:18,601,445-18,602,602 | - | C1H9g09840 | CX9g056393 | LOC_Os09g37976 | Os09g0552600 | - | Detail |
| C2H9g14226 | 9:18,606,239-18,608,507 | + | C1H9g15676 | CX9g054872 | LOC_Os09g38000 | Os09g0552800 | OsNAC109, YL3 | Detail |
| C2H9g12533 | 9:18,611,084-18,613,215 | + | C1H9g26813 | CX9g057788 | LOC_Os09g38010 | Os09g0552900 | - | Detail |
| C2H9g10941 | 9:18,620,794-18,625,942 | + | C1H9g17635 | CX9g055376 | LOC_Os09g38030 | Os09g0553200 | UGP1, Ugp1, OsUgp1, UGP2, UGP3 | Detail |
| C2H9g21953 | 9:18,626,744-18,629,492 | - | C1H9g26934 | CX9g058064 | LOC_Os09g38040 | Os09g0553300 | - | Detail |
| C2H9g19006 | 9:18,634,233-18,638,099 | + | C1H9g10869 | CX9g056104 | LOC_Os09g38060 | Os09g0553600 | - | Detail |
| C2H9g11910 | 9:18,640,615-18,641,481 | - | C1H9g05696 | - | LOC_Os09g38070 | Os09g0553700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |