| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H11g29912 | 11:12,735,990-12,737,310 | - | C2H11g07556 | CX11g013231 | LOC_Os11g24750 | Os11g0434850 | - | Detail |
| C1H11g10740 | 11:12,746,115-12,746,918 | - | C2H11g14639 | CX11g014572 | LOC_Os11g24730 | Os11g0435300 | - | Detail |
| C1H11g31801 | 11:12,751,902-12,753,302 | - | C2H11g05824 | CX11g013231 | LOC_Os11g24750 | Os11g0435100 | - | Detail |
| C1H11g15063 | 11:12,764,040-12,764,473 | - | C2H11g07382 | - | LOC_Os11g24770 | - | - | Detail |
| C1H11g11362 | 11:12,765,234-12,766,402 | - | C2H11g05850 | CX11g013231 | LOC_Os11g24770 | Os11g0435300 | - | Detail |
| C1H11g25299 | 11:12,766,439-12,766,851 | - | C2H11g27668 | CX11g013231 | LOC_Os11g24780 | - | - | Detail |
| C1H11g19808 | 11:12,772,464-12,776,190 | - | C2H11g01150 | CX11g013231 | LOC_Os11g24780 | Os11g0435300 | - | Detail |
| C1H11g30665 | 11:12,809,259-12,823,130 | - | C2H11g12989 | CX11g014572 | LOC_Os11g24850 | Os11g0435800 | - | Detail |
| C1H11g27401 | 11:12,869,611-12,875,684 | + | C2H11g04116 | CX11g010905 | LOC_Os11g25060 | Os11g0437800 | - | Detail |
| C1H11g12839 | 11:12,920,088-12,922,601 | + | C2H11g27572 | CX11g011935 | LOC_Os11g25560 | Os11g0442500 | - | Detail |
| C1H11g20213 | 11:12,936,772-12,937,086 | - | C2H11g30515 | - | - | - | - | Detail |
| C1H11g31810 | 11:12,960,132-12,961,529 | - | C2H11g30379 | CX11g011037 | LOC_Os11g25510 | Os11g0441900 | OsRLCK326 | Detail |
| C1H11g09866 | 11:12,967,819-12,968,424 | + | C2H11g19315 | CX11g011666 | LOC_Os11g25454 | Os11g0441500 | - | Detail |
| C1H11g02200 | 11:12,972,823-12,974,346 | + | C2H11g19618 | CX11g011666 | LOC_Os11g25454 | Os11g0441500 | - | Detail |
| C1H11g28618 | 11:12,987,080-12,987,623 | + | C2H11g21927 | - | LOC_Os11g25440 | - | - | Detail |
| C1H11g29057 | 11:12,987,706-12,988,149 | + | C2H11g21927 | CX11g014609 | LOC_Os11g25440 | Os11g0440422 | - | Detail |
| C1H11g25006 | 11:13,039,175-13,045,658 | + | C2H11g15961 | CX11g014987 | LOC_Os11g25330 | Os11g0440200 | - | Detail |
| C1H11g30108 | 11:13,063,092-13,068,924 | - | C2H11g25324 | CX11g013855 | LOC_Os11g25230 | Os11g0443700 | - | Detail |
| C1H11g21262 | 11:13,068,963-13,069,421 | - | C2H11g03192 | CX11g013855 | LOC_Os11g25700 | Os11g0443700 | - | Detail |
| C1H11g05188 | 11:13,111,859-13,118,146 | - | C2H11g07950 | CX11g012957 | LOC_Os11g25230 | Os11g0438700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g23743 | 1:5,305,835-5,306,335 | - | - | CX1g004127 | LOC_Os01g11240 | Os01g0210600 | - | Detail |
| C2H1g02275 | 1:5,314,040-5,318,157 | + | C1H1g15458 | - | - | Os01g0210750 | - | Detail |
| C2H1g05349 | 1:5,315,079-5,318,927 | - | C1H1g12886 | CX1g002610 | LOC_Os01g11250 | Os01g0210700 | KAT2, OsKAT2 | Detail |
| C2H1g07302 | 1:5,324,139-5,328,648 | + | C1H1g30027 | CX1g004526 | LOC_Os01g11260 | Os01g0210800 | - | Detail |
| C2H1g29439 | 1:5,330,062-5,331,597 | - | C1H1g11954 | CX1g005082 | LOC_Os01g11270 | Os01g0210900 | - | Detail |
| C2H1g23127 | 1:5,353,535-5,355,070 | - | C1H1g11954 | CX1g000827 | LOC_Os01g11300 | Os01g0211200 | - | Detail |
| C2H1g26875 | 1:5,363,256-5,364,782 | - | C1H1g11954 | CX1g005082 | LOC_Os01g11340 | Os01g0211600 | - | Detail |
| C2H1g05400 | 1:5,376,702-5,378,036 | - | C1H1g07906 | - | LOC_Os01g11350 | Os01g0211800 | - | Detail |
| C2H1g30364 | 1:5,392,325-5,404,996 | + | C1H1g25024 | CX1g006413 | LOC_Os01g11370 | Os01g0212100 | - | Detail |
| C2H1g07400 | 1:5,413,173-5,418,384 | + | C1H1g24516 | CX1g004990 | LOC_Os01g11414 | Os01g0212400 | - | Detail |
| C2H1g07852 | 1:5,419,207-5,420,699 | - | C1H1g10197 | CX1g007192 | LOC_Os01g11430 | Os01g0212500 | OsTIE1 | Detail |
| C2H1g19820 | 1:5,428,807-5,429,451 | - | - | - | - | - | - | Detail |
| C2H1g19922 | 1:5,447,110-5,450,771 | - | C1H1g26340 | CX1g001182 | LOC_Os01g11460 | Os01g0212700 | - | Detail |
| C2H1g21565 | 1:5,452,260-5,452,775 | - | C1H1g26340 | CX1g001182 | LOC_Os01g11480 | Os01g0673900 | - | Detail |
| C2H1g00533 | 1:5,455,349-5,456,053 | - | C1H1g22295 | CX1g001182 | LOC_Os01g11490 | Os01g0213100 | - | Detail |
| C2H1g20430 | 1:5,459,163-5,459,843 | - | C1H1g24050 | CX1g001182 | LOC_Os01g11500 | Os01g0213100 | - | Detail |
| C2H1g03845 | 1:5,462,634-5,464,451 | + | - | CX1g000251 | LOC_Os01g11510 | Os01g0213300 | - | Detail |
| C2H1g20281 | 1:5,470,874-5,471,578 | - | C1H1g26340 | CX1g001182 | LOC_Os01g11520 | Os01g0213400 | - | Detail |
| C2H1g27187 | 1:5,486,799-5,488,694 | - | C1H1g28036 | CX1g004394 | LOC_Os01g11550 | Os01g0213800 | OsPCF5, PCF5, OsTCP1, OsTCP1/PCF5 | Detail |
| C2H1g17634 | 1:5,519,687-5,522,015 | - | C1H1g17492 | CX1g003866 | LOC_Os01g11570 | Os01g0214200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |