| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H11g25805 | 11:12,347,103-12,356,961 | - | C2H11g16724 | CX11g012423 | LOC_Os11g24180 | Os11g0430000 | - | Detail |
| C1H11g12010 | 11:12,364,482-12,366,405 | - | C2H11g25376 | CX11g013731 | LOC_Os11g24180 | Os11g0430000 | - | Detail |
| C1H11g12919 | 11:12,371,767-12,374,164 | + | C2H11g17633 | - | - | - | - | Detail |
| C1H11g09024 | 11:12,385,704-12,395,784 | - | C2H11g12976 | CX11g012423 | LOC_Os11g24240 | Os11g0430600 | - | Detail |
| C1H11g02543 | 11:12,412,384-12,416,697 | - | C2H11g30333 | CX11g013731 | LOC_Os11g24290 | Os11g0431100 | - | Detail |
| C1H11g21721 | 11:12,444,635-12,447,906 | - | C2H11g19597 | CX11g014186 | LOC_Os11g24340 | Os11g0432900 | - | Detail |
| C1H11g29423 | 11:12,448,410-12,449,339 | - | C2H11g16593 | CX11g014186 | LOC_Os11g24340 | Os11g0431400 | - | Detail |
| C1H11g31438 | 11:12,474,289-12,482,767 | - | C2H11g12365 | CX11g014354 | LOC_Os11g24374 | Os11g0431700 | - | Detail |
| C1H11g03040 | 11:12,526,052-12,529,811 | + | C2H11g00370 | CX11g012167 | LOC_Os11g24450 | Os11g0432400 | - | Detail |
| C1H11g04692 | 11:12,574,239-12,575,151 | + | - | - | - | - | - | Detail |
| C1H11g21546 | 11:12,579,883-12,580,578 | + | C2H11g15846 | CX11g013698 | LOC_Os11g24484 | Os11g0432600 | - | Detail |
| C1H11g13305 | 11:12,588,458-12,588,697 | + | C2H11g03129 | - | LOC_Os11g24484 | Os11g0432600 | - | Detail |
| C1H11g14000 | 11:12,600,720-12,610,761 | - | C2H11g07128 | CX11g012423 | LOC_Os11g24510 | Os11g0432900 | - | Detail |
| C1H11g09985 | 11:12,622,753-12,627,139 | + | C2H11g08013 | CX11g010937 | LOC_Os11g24530 | Os11g0433101 | - | Detail |
| C1H11g29281 | 11:12,639,575-12,649,686 | + | C2H11g09309 | CX11g013255 | LOC_Os11g24540 | Os11g0433200 | - | Detail |
| C1H11g00040 | 11:12,672,546-12,680,054 | + | C2H11g28782 | CX11g014291 | LOC_Os11g24560 | Os11g0433500 | - | Detail |
| C1H11g04122 | 11:12,699,738-12,701,053 | + | C2H11g18350 | CX11g012273 | LOC_Os11g24610 | Os11g0433900 | - | Detail |
| C1H11g17428 | 11:12,703,324-12,706,705 | - | C2H11g01758 | CX11g011632 | LOC_Os11g24630 | Os11g0434000 | - | Detail |
| C1H11g03985 | 11:12,723,061-12,724,359 | - | C2H11g09856 | CX11g013231 | LOC_Os11g24780 | Os11g0434400 | - | Detail |
| C1H11g24091 | 11:12,731,775-12,732,133 | - | C2H11g02767 | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g01230 | 3:10,307,365-10,308,510 | + | C1H3g19861 | CX3g029583 | LOC_Os03g20500 | Os03g0321300 | - | Detail |
| C2H3g17781 | 3:10,308,593-10,308,889 | - | C1H3g31579 | - | - | - | - | Detail |
| C2H3g10177 | 3:10,316,260-10,322,166 | - | C1H3g05314 | CX3g030418 | LOC_Os03g20520 | Os03g0321400 | - | Detail |
| C2H3g16949 | 3:10,324,466-10,330,856 | - | C1H3g24166 | CX3g027287 | LOC_Os03g20530 | Os03g0321500 | OsBBP1 | Detail |
| C2H3g07472 | 3:10,345,050-10,346,093 | + | C1H3g22188 | CX3g030570 | LOC_Os03g20550 | Os03g0321700 | OsWRKY31, OsWRKY55 | Detail |
| C2H3g22893 | 3:10,347,237-10,347,962 | - | C1H3g31320 | CX3g029278 | LOC_Os03g20560 | Os03g0321800 | - | Detail |
| C2H3g22031 | 3:10,348,238-10,349,180 | + | C1H3g15973 | CX3g025622 | LOC_Os03g20570 | Os03g0321900 | - | Detail |
| C2H3g29406 | 3:10,351,022-10,357,302 | - | C1H3g10139 | CX3g027052 | LOC_Os03g20580 | Os03g0322000 | - | Detail |
| C2H3g13047 | 3:10,357,687-10,358,181 | + | C1H3g01616 | CX3g026700 | LOC_Os03g20590 | - | - | Detail |
| C2H3g25454 | 3:10,358,614-10,358,970 | - | C1H3g09864 | CX3g029175 | LOC_Os03g20600 | Os03g0322200 | - | Detail |
| C2H3g26982 | 3:10,361,368-10,365,986 | + | C1H3g20781 | CX3g026757 | LOC_Os03g20630 | Os03g0322500 | - | Detail |
| C2H3g00494 | 3:10,366,789-10,369,051 | + | C1H3g30541 | CX3g029187 | LOC_Os03g20640 | Os03g0322600 | - | Detail |
| C2H3g22567 | 3:10,369,392-10,372,866 | - | C1H3g17698 | CX3g029676 | LOC_Os03g20650 | Os03g0322700 | - | Detail |
| C2H3g08879 | 3:10,386,065-10,390,118 | + | C1H3g30170 | CX3g029908 | LOC_Os03g20670 | Os03g0322800 | - | Detail |
| C2H3g26182 | 3:10,391,164-10,392,277 | - | C1H3g03964 | CX3g027559 | LOC_Os03g20680 | Os03g0322900 | LEA17, OsLEA17, OsLEA3-2, LEA3-2 | Detail |
| C2H3g25815 | 3:10,397,789-10,403,134 | + | - | CX3g027985 | LOC_Os03g20700 | Os03g0323200 | OsCHLH | Detail |
| C2H3g04983 | 3:10,407,133-10,412,570 | + | C1H3g04844 | CX3g028829 | LOC_Os03g20720 | Os03g0323500 | - | Detail |
| C2H3g18862 | 3:10,413,313-10,413,825 | - | C1H3g01461 | CX3g028214 | LOC_Os03g20730 | Os03g0323600 | - | Detail |
| C2H3g17326 | 3:10,422,832-10,428,321 | + | C1H3g26967 | CX3g025044 | LOC_Os03g20750 | Os03g0323800 | OsVDAC8 | Detail |
| C2H3g13354 | 3:10,433,039-10,434,380 | + | C1H3g06354 | CX3g030983 | LOC_Os03g20760 | Os03g0323900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |