| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H11g12045 | 11:9,746,914-9,751,943 | + | C2H11g07893 | CX11g012634 | LOC_Os11g19460 | Os11g0300400 | - | Detail |
| C1H11g22172 | 11:9,757,460-9,766,599 | + | C2H11g24968 | CX11g014658 | LOC_Os11g19480 | Os11g0300700 | - | Detail |
| C1H11g06218 | 11:9,812,930-9,819,817 | + | C2H11g10996 | CX11g014762 | LOC_Os11g19700 | Os11g0302500 | - | Detail |
| C1H11g08961 | 11:9,826,624-9,833,083 | - | C2H11g29182 | CX11g011453 | LOC_Os11g19720 | Os11g0302700 | - | Detail |
| C1H11g19108 | 11:9,835,538-9,840,986 | + | C2H11g19966 | CX11g013772 | LOC_Os11g19730 | Os11g0302800 | - | Detail |
| C1H11g08675 | 11:9,844,496-9,845,243 | + | C2H11g00799 | CX11g013464 | LOC_Os11g19760 | - | - | Detail |
| C1H11g03488 | 11:9,860,486-9,861,982 | - | C2H11g01615 | CX11g011701 | LOC_Os11g19780 | Os11g0305400 | - | Detail |
| C1H11g10778 | 11:9,864,189-9,868,872 | - | C2H11g09578 | CX11g014279 | LOC_Os11g19810 | Os11g0303500 | - | Detail |
| C1H11g17108 | 11:9,885,702-9,888,964 | - | C2H11g09795 | CX11g012977 | LOC_Os11g19840 | Os11g0303600 | - | Detail |
| C1H11g18408 | 11:9,908,874-9,911,279 | - | C2H11g26849 | CX11g012952 | LOC_Os11g20040 | Os11g0305400 | - | Detail |
| C1H11g05184 | 11:9,956,128-9,956,703 | + | C2H11g27169 | - | - | - | - | Detail |
| C1H11g17221 | 11:9,959,211-9,960,609 | + | C2H11g17463 | - | - | - | - | Detail |
| C1H11g31342 | 11:9,971,011-9,974,779 | + | C2H11g16965 | CX11g014875 | LOC_Os11g20080 | Os11g0306300 | - | Detail |
| C1H11g17798 | 11:9,983,623-9,987,132 | - | C2H11g23003 | CX11g013503 | LOC_Os11g20090 | Os11g0306400 | - | Detail |
| C1H11g08193 | 11:10,024,937-10,026,516 | + | C2H11g22546 | - | - | Os11g0142300 | - | Detail |
| C1H11g06739 | 11:10,026,648-10,028,031 | + | C2H11g02112 | - | - | - | - | Detail |
| C1H11g30042 | 11:10,030,629-10,032,274 | - | C2H11g06597 | CX11g015017 | LOC_Os11g20160 | Os11g0307300 | - | Detail |
| C1H11g02491 | 11:10,099,255-10,100,495 | - | C2H7g27915 | CX11g014321 | - | - | - | Detail |
| C1H11g06486 | 11:10,100,839-10,101,501 | - | C2H11g04464 | CX11g014321 | - | - | - | Detail |
| C1H11g04505 | 11:10,231,769-10,237,225 | + | C2H11g07851 | CX11g012300 | LOC_Os11g20360 | Os11g0308800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g03359 | 3:5,792,932-5,793,630 | + | C1H3g23318 | CX3g025280 | LOC_Os03g12440 | - | - | Detail |
| C2H3g24748 | 3:5,794,954-5,802,619 | + | C1H3g17135 | CX3g030046 | LOC_Os03g12450 | Os03g0225500 | - | Detail |
| C2H3g09129 | 3:5,803,343-5,810,016 | + | C1H3g25680 | CX3g028144 | LOC_Os03g12460 | Os03g0225600 | - | Detail |
| C2H3g02566 | 3:5,811,449-5,816,438 | + | C1H3g10808 | CX3g025098 | LOC_Os03g12470 | Os03g0225700 | WAK25, OsWAK25 | Detail |
| C2H3g16646 | 3:5,821,016-5,822,452 | + | C1H3g31142 | CX3g026072 | LOC_Os03g12500 | Os03g0225900 | - | Detail |
| C2H3g10692 | 3:5,829,270-5,830,121 | - | C1H3g02465 | CX3g026153 | LOC_Os03g12510 | Os03g0226200 | Hb2, OsPgb1.2 | Detail |
| C2H3g15869 | 3:5,831,583-5,833,279 | + | C1H3g31559 | CX3g028573 | LOC_Os03g12520 | Os03g0226300 | - | Detail |
| C2H3g08794 | 3:5,833,428-5,834,000 | + | C1H3g14266 | CX3g028573 | LOC_Os03g12520 | Os03g0226300 | - | Detail |
| C2H3g29082 | 3:5,839,492-5,844,120 | + | C1H3g15877 | CX3g027606 | LOC_Os03g12530 | Os03g0226400 | - | Detail |
| C2H3g13286 | 3:5,850,353-5,857,091 | + | C1H3g27940 | CX3g025975 | LOC_Os03g12550 | Os03g0226600 | - | Detail |
| C2H3g30568 | 3:5,857,943-5,859,735 | - | C1H3g15687 | CX3g027982 | LOC_Os03g12560 | Os03g0226700 | - | Detail |
| C2H3g00790 | 3:5,860,981-5,866,764 | + | C1H3g18854 | CX3g024984 | LOC_Os03g12570 | Os03g0226800 | CMT3b | Detail |
| C2H3g22427 | 3:5,867,922-5,870,733 | + | C1H3g26728 | CX3g027871 | LOC_Os03g12570 | Os03g0226901 | - | Detail |
| C2H3g07335 | 3:5,873,669-5,881,089 | + | C1H3g26232 | CX3g030829 | LOC_Os03g12590 | Os03g0227000 | - | Detail |
| C2H3g16667 | 3:5,883,692-5,891,668 | + | C1H3g22048 | CX3g026050 | LOC_Os03g12610 | Os03g0227300 | - | Detail |
| C2H3g04602 | 3:5,891,978-5,893,629 | - | C1H3g19915 | CX3g031339 | LOC_Os03g12620 | Os03g0227400 | - | Detail |
| C2H3g27028 | 3:5,903,063-5,906,526 | + | C1H3g13701 | CX3g027265 | LOC_Os03g12630 | Os03g0227500 | - | Detail |
| C2H3g25912 | 3:5,922,820-5,929,627 | + | C1H3g10637 | CX3g027504 | LOC_Os03g12660 | Os03g0227700 | OsDWF4, OsDWARF4, CYP90B2 | Detail |
| C2H3g15726 | 3:5,931,799-5,936,573 | + | C1H3g00645 | CX3g025096 | LOC_Os03g12670 | Os03g0141200 | OsBMY4 | Detail |
| C2H3g08529 | 3:5,935,003-5,936,506 | - | - | CX3g029136 | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |