| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H11g29393 | 11:7,922,482-7,924,620 | - | C2H11g18472 | CX11g011020 | LOC_Os11g16260 | Os11g0264000 | - | Detail |
| C1H11g13983 | 11:7,939,031-7,940,176 | + | C2H11g09727 | CX11g012469 | LOC_Os11g16280 | Os11g0264200 | - | Detail |
| C1H11g20022 | 11:7,941,956-7,947,807 | - | C2H11g17294 | CX11g013644 | LOC_Os11g16290 | Os11g0264300 | - | Detail |
| C1H11g21980 | 11:7,960,624-7,963,162 | + | C2H11g21403 | CX11g011141 | LOC_Os11g16310 | Os11g0264500 | - | Detail |
| C1H11g21173 | 11:7,963,242-7,964,754 | + | C2H11g21403 | CX11g011141 | LOC_Os11g16310 | Os11g0264500 | - | Detail |
| C1H11g12155 | 11:7,967,491-7,972,022 | + | C2H11g00407 | CX11g014282 | LOC_Os11g16320 | Os11g0264600 | - | Detail |
| C1H11g27286 | 11:7,976,229-7,980,763 | - | C2H11g28981 | CX11g013240 | LOC_Os11g16330 | Os11g0264700 | - | Detail |
| C1H11g26572 | 11:7,994,503-7,995,558 | - | C2H11g23728 | CX11g014496 | LOC_Os11g16350 | Os11g0264900 | - | Detail |
| C1H11g26962 | 11:8,003,196-8,013,724 | + | C2H11g24690 | CX11g013621 | LOC_Os11g16370 | Os11g0265000 | - | Detail |
| C1H11g10641 | 11:8,019,325-8,022,589 | - | C2H11g18440 | CX11g011366 | LOC_Os11g16390 | Os11g0265200 | - | Detail |
| C1H11g27767 | 11:8,024,375-8,028,086 | - | C2H11g02793 | CX11g014802 | LOC_Os11g16400 | Os11g0120200 | - | Detail |
| C1H11g24632 | 11:8,031,772-8,036,780 | + | C2H11g16626 | CX11g013571 | LOC_Os11g16410 | Os11g0265400 | - | Detail |
| C1H11g22754 | 11:8,037,148-8,043,024 | - | C2H11g29154 | CX11g011410 | LOC_Os11g16420 | Os11g0265500 | - | Detail |
| C1H11g26537 | 11:8,045,491-8,050,644 | + | C2H11g16943 | CX11g014475 | LOC_Os11g16430 | Os11g0265600 | - | Detail |
| C1H11g13216 | 11:8,054,466-8,060,985 | + | C2H11g30053 | CX11g012316 | LOC_Os11g16460 | Os11g0265800 | - | Detail |
| C1H11g20316 | 11:8,063,358-8,066,765 | + | C2H11g25760 | CX11g011969 | LOC_Os11g16470 | Os11g0266500 | - | Detail |
| C1H11g19640 | 11:8,068,735-8,072,390 | - | C2H11g10519 | CX11g012730 | LOC_Os11g16480 | Os11g0266000 | - | Detail |
| C1H11g29447 | 11:8,097,830-8,099,108 | + | - | - | - | - | - | Detail |
| C1H11g27369 | 11:8,102,046-8,110,647 | + | C2H11g02943 | CX11g011993 | LOC_Os11g16530 | Os11g0266500 | - | Detail |
| C1H11g30579 | 11:8,119,461-8,135,422 | - | C2H11g25609 | CX11g011365 | LOC_Os11g16540 | Os11g0266800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g07939 | 1:30,166,036-30,168,196 | - | C1H1g19538 | CX1g005593 | LOC_Os01g58730 | Os01g0801500 | - | Detail |
| C2H1g30108 | 1:30,168,609-30,171,707 | - | C1H1g05474 | CX1g003950 | LOC_Os01g58740 | Os01g0801600 | - | Detail |
| C2H1g26051 | 1:30,172,897-30,176,258 | - | C1H1g14045 | CX1g005695 | LOC_Os01g58750 | Os01g0801700 | OsGCD1 | Detail |
| C2H1g19105 | 1:30,182,459-30,184,419 | - | - | - | - | - | - | Detail |
| C2H1g24587 | 1:30,197,757-30,202,818 | + | C1H1g01326 | CX1g000361 | LOC_Os01g58790 | Os01g0802100 | OsIspE, IspE, OsCMK, CMK | Detail |
| C2H1g08686 | 1:30,216,620-30,218,774 | - | C1H1g15075 | CX1g002565 | LOC_Os01g58860 | Os01g0802700 | OsPIN9 | Detail |
| C2H1g30330 | 1:30,232,946-30,233,720 | + | C1H1g24422 | CX1g002172 | LOC_Os01g58890 | Os01g0803200 | - | Detail |
| C2H1g25597 | 1:30,243,490-30,245,237 | - | C1H1g07293 | CX1g000223 | LOC_Os01g58910 | Os01g0803300 | - | Detail |
| C2H1g05023 | 1:30,257,504-30,259,030 | + | C1H1g24602 | CX1g005013 | LOC_Os01g58960 | Os01g0803800 | CYP94D12, OsCYP94D12 | Detail |
| C2H1g26033 | 1:30,261,999-30,263,537 | + | C1H1g19345 | CX1g005013 | LOC_Os01g58970 | Os01g0803900 | CYP94D11, OsCYP94D11, OsCYPq1 | Detail |
| C2H1g28126 | 1:30,286,808-30,288,426 | - | C1H1g26715 | CX1g005195 | LOC_Os01g59060 | Os01g0805000 | - | Detail |
| C2H1g18483 | 1:30,291,209-30,292,424 | - | C1H1g02848 | CX1g000028 | LOC_Os01g59080 | Os01g0805200 | - | Detail |
| C2H1g25136 | 1:30,292,535-30,298,269 | + | C1H1g13654 | CX1g000520 | LOC_Os01g59100 | Os01g0805400 | Os6 | Detail |
| C2H1g18311 | 1:30,299,357-30,299,566 | - | C1H12g00195 | - | - | - | - | Detail |
| C2H1g25416 | 1:30,299,605-30,300,492 | - | - | CX1g005761 | - | - | - | Detail |
| C2H1g00011 | 1:30,300,738-30,301,334 | + | C1H1g23718 | CX1g002439 | LOC_Os01g59110 | Os01g0805500 | - | Detail |
| C2H1g05127 | 1:30,302,551-30,303,204 | + | C1H1g23718 | CX1g002439 | LOC_Os01g59110 | Os01g0805500 | - | Detail |
| C2H1g05794 | 1:30,303,559-30,306,662 | - | C1H1g31482 | CX1g004982 | LOC_Os01g59120 | Os01g0805600 | Orysa;CycB1;1 | Detail |
| C2H1g03484 | 1:30,307,605-30,313,872 | - | C1H1g30942 | CX1g001600 | LOC_Os01g59130 | Os01g0805700 | - | Detail |
| C2H1g17768 | 1:30,315,471-30,319,142 | - | C1H1g01953 | CX1g000155 | LOC_Os01g59140 | Os01g0805800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |