| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H11g09825 | 11:6,320,209-6,320,850 | - | C2H11g20164 | - | LOC_Os11g13420 | Os11g0237700 | - | Detail |
| C1H11g17770 | 11:6,324,405-6,328,351 | + | C2H11g30175 | CX11g013777 | LOC_Os11g13410 | Os11g0237600 | - | Detail |
| C1H11g20635 | 11:6,329,085-6,331,128 | - | C2H11g23564 | - | LOC_Os11g13420 | Os11g0237700 | - | Detail |
| C1H11g24065 | 11:6,336,800-6,337,132 | + | - | - | - | - | - | Detail |
| C1H11g15281 | 11:6,341,353-6,345,503 | + | C2H11g03453 | CX11g013095 | LOC_Os11g13430 | Os11g0237900 | - | Detail |
| C1H11g26507 | 11:6,353,931-6,359,494 | + | C2H11g14201 | CX11g014549 | LOC_Os11g13510 | Os11g0237900 | - | Detail |
| C1H11g21105 | 11:6,374,954-6,376,327 | - | C2H11g08961 | CX11g014044 | LOC_Os11g13530 | Os11g0239000 | - | Detail |
| C1H11g04206 | 11:6,383,248-6,383,472 | + | - | - | - | - | - | Detail |
| C1H11g14080 | 11:6,384,834-6,387,381 | - | C2H11g27098 | CX11g012409 | LOC_Os11g13540 | Os11g0239200 | - | Detail |
| C1H11g26681 | 11:6,401,072-6,402,420 | - | C2H11g19959 | CX11g011030 | LOC_Os11g13540 | Os11g0239200 | - | Detail |
| C1H11g11380 | 11:6,405,045-6,406,287 | - | C2H11g26049 | CX11g011030 | LOC_Os11g13560 | Os11g0239200 | - | Detail |
| C1H11g29870 | 11:6,408,857-6,409,963 | - | C2H11g29740 | CX11g015034 | LOC_Os11g13570 | Os11g0239500 | - | Detail |
| C1H11g11556 | 11:6,427,854-6,428,921 | - | C2H11g29740 | CX11g015034 | LOC_Os11g13670 | Os11g0240600 | - | Detail |
| C1H11g06957 | 11:6,441,516-6,457,749 | + | C2H11g23152 | CX11g012002 | LOC_Os11g13694 | Os11g0240900 | - | Detail |
| C1H11g01127 | 11:6,473,446-6,474,495 | + | - | CX11g011395 | LOC_Os11g13710 | Os11g0241000 | - | Detail |
| C1H11g07494 | 11:6,479,200-6,479,751 | - | - | CX11g011094 | LOC_Os11g13720 | Os11g0241200 | - | Detail |
| C1H11g03938 | 11:6,482,920-6,483,378 | - | - | CX11g014950 | LOC_Os11g13750 | Os11g0241700 | - | Detail |
| C1H11g05538 | 11:6,494,120-6,494,674 | - | - | CX11g013288 | LOC_Os11g13770 | Os11g0241832 | - | Detail |
| C1H11g26723 | 11:6,497,154-6,501,135 | - | C2H11g28089 | CX11g011159 | LOC_Os11g13800 | Os11g0241900 | - | Detail |
| C1H11g18417 | 11:6,510,062-6,521,619 | + | C2H11g10078 | CX11g012726 | LOC_Os11g13810 | Os11g0242100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g06482 | 2:29,371,707-29,373,467 | + | C1H2g24237 | CX2g020266 | LOC_Os02g52480 | Os02g0762400 | KRP1, OsiICK1, Orysa;KRP1, OrysaICK1, Orysa;ICK1, CDKI | Detail |
| C2H2g14994 | 2:29,379,968-29,380,435 | - | - | CX2g020064 | LOC_Os02g52490 | Os02g0762600 | SGL1 | Detail |
| C2H2g29446 | 2:29,385,573-29,394,313 | - | C1H2g04159 | CX2g022518 | LOC_Os02g52510 | Os02g0762800 | OsRad54 | Detail |
| C2H2g01751 | 2:29,397,002-29,397,304 | - | - | CX2g023245 | LOC_Os02g52540 | - | - | Detail |
| C2H2g11954 | 2:29,401,275-29,402,154 | + | C1H2g10187 | CX2g023141 | LOC_Os02g52550 | Os02g0763000 | OsCNR1, TGW2, OsFWL1 | Detail |
| C2H2g00538 | 2:29,415,549-29,416,080 | + | C1H2g21759 | - | - | - | - | Detail |
| C2H2g18956 | 2:29,419,129-29,422,357 | + | C1H2g09761 | CX2g024148 | LOC_Os02g52560 | Os02g0763200 | - | Detail |
| C2H2g03175 | 2:29,423,273-29,426,274 | + | C1H2g15844 | CX2g024148 | LOC_Os02g52590 | Os02g0763800 | - | Detail |
| C2H2g23310 | 2:29,426,521-29,426,997 | + | C1H2g15324 | - | LOC_Os02g52610 | Os02g0763900 | - | Detail |
| C2H2g02605 | 2:29,429,194-29,432,334 | + | C1H2g26295 | CX2g023343 | LOC_Os02g52610 | Os02g0763900 | - | Detail |
| C2H2g18172 | 2:29,435,564-29,438,153 | + | C1H2g14291 | CX2g019855 | LOC_Os02g52630 | Os02g0764200 | - | Detail |
| C2H2g07475 | 2:29,442,236-29,444,534 | + | C1H2g16896 | CX2g023343 | LOC_Os02g52640 | Os02g0764400 | - | Detail |
| C2H2g26785 | 2:29,444,959-29,446,785 | - | C1H2g16728 | CX2g022219 | LOC_Os02g52650 | Os02g0764500 | - | Detail |
| C2H2g22917 | 2:29,448,988-29,449,743 | - | C1H2g23870 | CX2g021656 | LOC_Os02g52670 | Os02g0764700 | OsERF103 | Detail |
| C2H2g26543 | 2:29,462,389-29,463,967 | + | C1H2g10581 | CX2g018991 | LOC_Os02g52700 | Os02g0765400 | Amy1C | Detail |
| C2H2g29404 | 2:29,466,319-29,467,913 | - | C1H2g08973 | CX2g021489 | LOC_Os02g52710 | Os02g0765600 | AMY1A, Amy1A/C*(RAmy1A/C), alpha Amy7, AMY1.1, Amy1A, RAmy1A/C, Amy1A/C*, Amy1, Amy1A_C, OsAmy1A, alphaAmy7-C, RAmy1A | Detail |
| C2H2g24763 | 2:29,471,454-29,472,131 | - | C1H2g26635 | CX2g019501 | LOC_Os02g52720 | Os02g0765800 | - | Detail |
| C2H2g20003 | 2:29,474,844-29,478,669 | - | C1H2g13987 | CX2g022397 | LOC_Os02g52744 | Os02g0766000 | - | Detail |
| C2H2g16702 | 2:29,485,155-29,485,984 | + | C1H2g23770 | CX2g019269 | LOC_Os02g52770 | Os02g0766600 | - | Detail |
| C2H2g14916 | 2:29,487,761-29,492,896 | - | C1H2g16420 | CX2g021391 | LOC_Os02g52780 | Os02g0766700 | BZIP23, OsbZIP23, OsAREB1, OsABF2, Osbzip23, OsAREB2 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |