| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H11g06298 | 11:5,748,326-5,752,225 | + | C2H11g00157 | CX11g013950 | LOC_Os11g11890 | Os11g0226201 | - | Detail |
| C1H11g26018 | 11:5,754,521-5,769,413 | - | C2H11g10142 | CX11g011196 | LOC_Os11g11990 | Os11g0227100 | - | Detail |
| C1H11g24668 | 11:5,847,852-5,850,575 | - | C2H11g10675 | CX11g013827 | LOC_Os11g11950 | Os11g0226800 | - | Detail |
| C1H11g10263 | 11:5,865,195-5,870,539 | - | C2H11g11689 | CX11g011196 | LOC_Os11g11960 | Os11g0226933 | - | Detail |
| C1H11g10072 | 11:5,873,006-5,873,576 | - | C2H11g11957 | CX11g010867 | LOC_Os11g11980 | Os11g0227000 | - | Detail |
| C1H11g01549 | 11:5,875,866-5,876,563 | - | C2H11g14188 | - | LOC_Os11g11970 | Os11g0226966 | - | Detail |
| C1H11g25169 | 11:5,896,490-5,897,050 | + | C2H11g23911 | CX11g013827 | LOC_Os11g12000 | Os11g0227200 | - | Detail |
| C1H11g09922 | 11:5,901,002-5,905,816 | - | C2H11g29976 | - | - | Os11g0227600 | - | Detail |
| C1H11g17829 | 11:5,905,365-5,907,935 | + | C2H11g08872 | CX11g011196 | LOC_Os11g12320 | Os11g0227700 | - | Detail |
| C1H11g07566 | 11:5,912,264-5,914,966 | + | C2H11g01121 | CX11g011196 | LOC_Os11g12330 | Os11g0229400 | - | Detail |
| C1H11g02786 | 11:5,922,707-5,929,081 | + | C2H11g01121 | CX11g011196 | LOC_Os11g12350 | Os11g0229500 | RPR1, OsRSR1 | Detail |
| C1H11g28059 | 11:5,970,472-5,972,478 | + | C2H11g11028 | CX11g014044 | LOC_Os11g12410 | Os11g0230400 | - | Detail |
| C1H11g28297 | 11:5,980,423-5,981,717 | + | C2H11g07743 | CX11g012409 | LOC_Os11g12420 | Os11g0230700 | - | Detail |
| C1H11g28440 | 11:5,989,706-5,991,032 | + | C2H11g13470 | CX11g014044 | LOC_Os11g12460 | Os11g0231200 | - | Detail |
| C1H11g12986 | 11:5,995,153-5,996,451 | - | C2H11g15389 | CX11g011240 | LOC_Os11g12470 | Os11g0231400 | - | Detail |
| C1H11g18273 | 11:6,000,042-6,000,491 | + | C2H11g27293 | - | - | - | - | Detail |
| C1H11g13870 | 11:6,002,237-6,004,051 | + | C2H11g29294 | CX11g012962 | LOC_Os11g12480 | Os11g0231600 | - | Detail |
| C1H11g26307 | 11:6,009,260-6,010,717 | + | C2H11g11520 | CX11g014044 | LOC_Os11g12490 | Os11g0231800 | - | Detail |
| C1H11g21887 | 11:6,027,991-6,029,144 | + | C2H11g11520 | CX11g012409 | LOC_Os11g12520 | Os11g0232000 | - | Detail |
| C1H11g15217 | 11:6,037,406-6,038,014 | + | C2H11g30123 | CX11g014044 | LOC_Os11g12520 | Os11g0232000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g09801 | 12:21,827,237-21,833,550 | - | C1H12g30446 | CX12g015068 | LOC_Os12g41860 | Os12g0612700 | HOX33, Oshox33, OsHox33, OSHB3, SIP22 | Detail |
| C2H12g16409 | 12:21,853,021-21,855,610 | - | C1H12g15166 | CX12g016296 | LOC_Os12g41880 | Os12g0613000 | OsNF-YA9, HAP2B | Detail |
| C2H12g23350 | 12:21,863,210-21,866,623 | - | C1H12g18689 | CX12g015834 | LOC_Os12g41890 | Os12g0613100 | - | Detail |
| C2H12g07115 | 12:21,869,810-21,878,465 | - | C1H12g03545 | CX12g015458 | LOC_Os12g41900 | Os12g0613200 | - | Detail |
| C2H12g16250 | 12:21,880,222-21,885,390 | - | C1H12g27977 | CX12g017712 | LOC_Os12g41910 | Os12g0613250 | - | Detail |
| C2H12g14082 | 12:21,886,979-21,890,466 | - | C1H12g07619 | CX12g017601 | LOC_Os12g41920 | Os12g0613300 | - | Detail |
| C2H12g28184 | 12:21,893,696-21,896,522 | + | C1H12g09933 | CX12g015124 | LOC_Os12g41930 | Os12g0613500 | - | Detail |
| C2H12g06308 | 12:21,902,684-21,905,441 | + | C1H12g00573 | CX12g017477 | LOC_Os12g41940 | Os12g0613600 | - | Detail |
| C2H12g17629 | 12:21,906,181-21,912,213 | - | C1H12g26381 | CX12g015895 | LOC_Os12g41950 | Os12g0613700 | - | Detail |
| C2H12g16140 | 12:21,919,582-21,923,609 | + | C1H12g30792 | CX12g017805 | LOC_Os12g41956 | Os12g0613850 | - | Detail |
| C2H12g29571 | 12:21,926,478-21,927,833 | + | C1H12g18392 | CX12g016006 | LOC_Os12g41962 | Os12g0614000 | - | Detail |
| C2H12g03202 | 12:21,931,057-21,932,190 | - | C1H12g31715 | - | LOC_Os12g41970 | Os12g0614100 | - | Detail |
| C2H12g06671 | 12:21,951,823-21,953,148 | - | C1H12g31715 | - | LOC_Os12g41970 | Os12g0614100 | - | Detail |
| C2H12g27495 | 12:21,975,173-21,976,633 | + | C1H12g19557 | CX12g018662 | LOC_Os12g42020 | Os12g0614600 | OsPID | Detail |
| C2H12g11729 | 12:21,980,662-21,981,056 | - | C1H12g25115 | - | - | - | - | Detail |
| C2H12g28277 | 12:21,997,182-21,998,117 | + | C1H12g00787 | CX12g018590 | LOC_Os12g42040 | Os12g0614800 | - | Detail |
| C2H12g19188 | 12:21,998,929-22,000,053 | + | C1H12g00787 | CX12g018590 | LOC_Os12g42040 | Os12g0614851 | - | Detail |
| C2H12g27121 | 12:22,009,318-22,014,447 | - | C1H12g24806 | - | - | - | - | Detail |
| C2H12g11390 | 12:22,010,442-22,013,265 | + | C1H12g12175 | CX12g015873 | LOC_Os12g42070 | Os12g0615000 | - | Detail |
| C2H12g17411 | 12:22,015,032-22,016,676 | + | C1H12g00787 | CX12g017642 | LOC_Os12g42060 | Os12g0615100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |