| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g10011 | 1:5,088,615-5,090,934 | + | C2H1g13509 | CX1g000819 | LOC_Os01g10820 | Os01g0205500 | - | Detail |
| C1H1g14161 | 1:5,092,774-5,096,953 | - | C2H1g23870 | CX1g005006 | LOC_Os01g10840 | Os01g0205700 | OsGSK1 | Detail |
| C1H1g29186 | 1:5,108,007-5,109,563 | + | C2H1g26064 | CX1g004213 | LOC_Os01g10850 | Os01g0205900 | - | Detail |
| C1H1g14349 | 1:5,114,157-5,116,663 | - | C2H1g07122 | CX1g004112 | LOC_Os01g10860 | Os01g0206200 | - | Detail |
| C1H1g26102 | 1:5,123,712-5,124,019 | + | C2H1g26046 | CX1g000067 | LOC_Os01g10880 | Os01g0206600 | - | Detail |
| C1H1g13675 | 1:5,130,888-5,134,524 | - | C2H1g21997 | CX1g006766 | LOC_Os01g10900 | Os01g0206800 | - | Detail |
| C1H1g27430 | 1:5,134,360-5,134,779 | + | C2H1g22901 | - | - | Os01g0207001 | - | Detail |
| C1H1g29711 | 1:5,137,480-5,139,285 | - | C2H1g18153 | CX1g005481 | LOC_Os01g10920 | Os01g0207200 | - | Detail |
| C1H1g26757 | 1:5,139,927-5,141,783 | - | C2H1g15053 | CX1g005600 | LOC_Os01g10930 | Os01g0207200 | - | Detail |
| C1H1g01947 | 1:5,149,302-5,151,140 | - | C2H1g00526 | CX1g002931 | LOC_Os01g10960 | Os01g0207600 | - | Detail |
| C1H1g18999 | 1:5,152,259-5,153,051 | + | C2H1g21950 | CX1g000352 | LOC_Os01g10970 | Os01g0207900 | - | Detail |
| C1H1g20276 | 1:5,155,792-5,156,539 | + | C2H1g18529 | CX1g000352 | LOC_Os01g10970 | Os01g0207700 | - | Detail |
| C1H1g25528 | 1:5,163,053-5,163,676 | + | - | - | - | - | - | Detail |
| C1H1g26781 | 1:5,164,019-5,165,466 | + | C2H1g21935 | CX1g000352 | LOC_Os01g10980 | Os01g0207900 | - | Detail |
| C1H1g25464 | 1:5,170,032-5,171,583 | + | C2H1g29674 | CX1g005883 | LOC_Os01g10990 | Os01g0208000 | - | Detail |
| C1H1g11853 | 1:5,180,501-5,182,286 | + | C2H1g12071 | CX1g000352 | LOC_Os01g10970 | Os01g0207900 | - | Detail |
| C1H1g28948 | 1:5,200,833-5,208,588 | + | C2H1g19708 | CX1g005878 | LOC_Os01g11040 | Os01g0208600 | - | Detail |
| C1H1g05716 | 1:5,209,967-5,214,728 | + | C2H1g22516 | CX1g006828 | LOC_Os01g11054 | Os01g0208700 | Osppc4 | Detail |
| C1H1g21624 | 1:5,215,206-5,220,318 | + | C2H1g01505 | CX1g004331 | LOC_Os01g11070 | Os01g0209000 | - | Detail |
| C1H1g24219 | 1:5,225,098-5,228,141 | + | C2H1g10245 | CX1g001114 | LOC_Os01g11110 | Os01g0209200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g00290 | 1:5,680,263-5,680,658 | + | C1H1g09690 | CX1g005289 | LOC_Os01g11860 | Os01g0217500 | - | Detail |
| C2H1g04999 | 1:5,683,643-5,686,368 | + | C1H1g24673 | CX1g006272 | LOC_Os01g11880 | Os01g0217800 | - | Detail |
| C2H1g26585 | 1:5,694,890-5,706,732 | + | C1H1g21326 | CX1g006867 | LOC_Os01g11900 | Os01g0218032 | ROS1A, ROS1a, OsROS1, TA2 | Detail |
| C2H1g12652 | 1:5,714,986-5,715,949 | + | C1H1g12724 | CX1g003932 | LOC_Os01g11910 | Os01g0218100 | - | Detail |
| C2H1g17909 | 1:5,723,198-5,728,233 | + | C1H1g09961 | CX1g004539 | LOC_Os01g11920 | Os01g0218200 | - | Detail |
| C2H1g16216 | 1:5,735,888-5,738,164 | + | C1H8g13175 | CX1g006461 | LOC_Os01g18920 | - | - | Detail |
| C2H1g10690 | 1:5,744,235-5,749,317 | + | C1H1g30290 | CX1g000608 | LOC_Os01g11940 | Os01g0218500 | - | Detail |
| C2H1g22932 | 1:5,751,016-5,757,148 | - | C1H1g21863 | CX1g003540 | LOC_Os01g11946 | Os01g0218700 | - | Detail |
| C2H1g17937 | 1:5,757,524-5,770,829 | - | C1H1g28664 | CX1g000915 | LOC_Os01g11960 | Os01g0218900 | - | Detail |
| C2H1g09244 | 1:5,782,770-5,783,516 | + | C1H1g00514 | CX1g004702 | LOC_Os01g11970 | Os01g0219000 | - | Detail |
| C2H1g22718 | 1:5,784,729-5,786,591 | + | C1H1g27900 | CX1g003171 | LOC_Os01g11980 | Os01g0219100 | - | Detail |
| C2H1g24979 | 1:5,788,027-5,790,966 | + | C1H1g26992 | CX1g000508 | LOC_Os01g11990 | Os01g0219200 | ZYGO1 | Detail |
| C2H1g04486 | 1:5,794,028-5,794,585 | + | - | CX1g003538 | LOC_Os01g12000 | Os01g0219300 | - | Detail |
| C2H1g07180 | 1:5,800,293-5,800,649 | + | C1H1g22028 | CX1g005007 | LOC_Os01g12020 | Os01g0219500 | OsLTPL18 | Detail |
| C2H1g00052 | 1:5,801,729-5,804,473 | - | C1H1g09843 | CX1g005138 | LOC_Os01g12030 | Os01g0219600 | - | Detail |
| C2H1g03412 | 1:5,814,319-5,817,356 | - | C1H1g27823 | CX1g005599 | LOC_Os01g12070 | Os01g0220100 | OsCel9A | Detail |
| C2H1g01177 | 1:5,821,247-5,828,091 | - | C1H1g03057 | CX1g001222 | LOC_Os01g12080 | Os01g0220200 | - | Detail |
| C2H1g26925 | 1:5,835,272-5,838,341 | + | C1H1g21223 | CX1g003024 | LOC_Os01g12090 | Os01g0220300 | - | Detail |
| C2H1g24533 | 1:5,838,883-5,839,386 | - | C1H1g15416 | - | - | Os01g0220400 | - | Detail |
| C2H1g24521 | 1:5,842,627-5,843,755 | - | C1H1g25550 | CX1g004887 | LOC_Os01g12110 | Os01g0220500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |