| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g10011 | 1:5,088,615-5,090,934 | + | C2H1g13509 | CX1g000819 | LOC_Os01g10820 | Os01g0205500 | - | Detail |
| C1H1g14161 | 1:5,092,774-5,096,953 | - | C2H1g23870 | CX1g005006 | LOC_Os01g10840 | Os01g0205700 | OsGSK1 | Detail |
| C1H1g29186 | 1:5,108,007-5,109,563 | + | C2H1g26064 | CX1g004213 | LOC_Os01g10850 | Os01g0205900 | - | Detail |
| C1H1g14349 | 1:5,114,157-5,116,663 | - | C2H1g07122 | CX1g004112 | LOC_Os01g10860 | Os01g0206200 | - | Detail |
| C1H1g26102 | 1:5,123,712-5,124,019 | + | C2H1g26046 | CX1g000067 | LOC_Os01g10880 | Os01g0206600 | - | Detail |
| C1H1g13675 | 1:5,130,888-5,134,524 | - | C2H1g21997 | CX1g006766 | LOC_Os01g10900 | Os01g0206800 | - | Detail |
| C1H1g27430 | 1:5,134,360-5,134,779 | + | C2H1g22901 | - | - | Os01g0207001 | - | Detail |
| C1H1g29711 | 1:5,137,480-5,139,285 | - | C2H1g18153 | CX1g005481 | LOC_Os01g10920 | Os01g0207200 | - | Detail |
| C1H1g26757 | 1:5,139,927-5,141,783 | - | C2H1g15053 | CX1g005600 | LOC_Os01g10930 | Os01g0207200 | - | Detail |
| C1H1g01947 | 1:5,149,302-5,151,140 | - | C2H1g00526 | CX1g002931 | LOC_Os01g10960 | Os01g0207600 | - | Detail |
| C1H1g18999 | 1:5,152,259-5,153,051 | + | C2H1g21950 | CX1g000352 | LOC_Os01g10970 | Os01g0207900 | - | Detail |
| C1H1g20276 | 1:5,155,792-5,156,539 | + | C2H1g18529 | CX1g000352 | LOC_Os01g10970 | Os01g0207700 | - | Detail |
| C1H1g25528 | 1:5,163,053-5,163,676 | + | - | - | - | - | - | Detail |
| C1H1g26781 | 1:5,164,019-5,165,466 | + | C2H1g21935 | CX1g000352 | LOC_Os01g10980 | Os01g0207900 | - | Detail |
| C1H1g25464 | 1:5,170,032-5,171,583 | + | C2H1g29674 | CX1g005883 | LOC_Os01g10990 | Os01g0208000 | - | Detail |
| C1H1g11853 | 1:5,180,501-5,182,286 | + | C2H1g12071 | CX1g000352 | LOC_Os01g10970 | Os01g0207900 | - | Detail |
| C1H1g28948 | 1:5,200,833-5,208,588 | + | C2H1g19708 | CX1g005878 | LOC_Os01g11040 | Os01g0208600 | - | Detail |
| C1H1g05716 | 1:5,209,967-5,214,728 | + | C2H1g22516 | CX1g006828 | LOC_Os01g11054 | Os01g0208700 | Osppc4 | Detail |
| C1H1g21624 | 1:5,215,206-5,220,318 | + | C2H1g01505 | CX1g004331 | LOC_Os01g11070 | Os01g0209000 | - | Detail |
| C1H1g24219 | 1:5,225,098-5,228,141 | + | C2H1g10245 | CX1g001114 | LOC_Os01g11110 | Os01g0209200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g11310 | 6:1,537,223-1,538,105 | + | C1H6g12632 | CX6g045336 | LOC_Os06g04850 | Os06g0140400 | - | Detail |
| C2H6g12351 | 6:1,551,044-1,552,073 | + | C1H6g28945 | CX6g042238 | LOC_Os06g04870 | Os06g0140700 | - | Detail |
| C2H6g07431 | 6:1,553,345-1,560,023 | - | C1H6g16218 | CX6g041483 | LOC_Os06g04880 | Os06g0140800 | - | Detail |
| C2H6g08771 | 6:1,565,592-1,565,798 | - | - | CX6g042795 | LOC_Os06g04889 | Os06g0140900 | - | Detail |
| C2H6g06281 | 6:1,568,563-1,569,963 | - | C1H6g10901 | CX6g042963 | LOC_Os06g04900 | Os06g0141100 | OsSTP19 | Detail |
| C2H6g22276 | 6:1,571,005-1,574,212 | - | C1H6g22682 | CX6g042744 | LOC_Os06g04910 | Os06g0141166 | - | Detail |
| C2H6g22440 | 6:1,577,164-1,577,822 | - | C1H6g07568 | CX6g044396 | LOC_Os06g04920 | Os06g0141200 | OsZFP1 | Detail |
| C2H6g06397 | 6:1,584,919-1,585,698 | - | C1H6g14984 | - | LOC_Os06g05020 | Os06g0141400 | - | Detail |
| C2H6g02034 | 6:1,591,453-1,592,070 | - | C1H6g01608 | - | LOC_Os06g05010 | Os06g0142200 | - | Detail |
| C2H6g13986 | 6:1,596,693-1,597,253 | - | C1H6g04172 | - | LOC_Os06g05010 | Os06g0142350 | - | Detail |
| C2H6g28627 | 6:1,599,565-1,601,073 | + | C1H6g19864 | CX6g043146 | LOC_Os06g04970 | Os06g0142000 | - | Detail |
| C2H6g02748 | 6:1,602,170-1,604,257 | + | C1H6g19864 | CX6g043146 | LOC_Os06g04970 | Os06g0142050 | - | Detail |
| C2H6g19975 | 6:1,605,035-1,608,277 | + | C1H6g27997 | CX6g044459 | LOC_Os06g04980 | Os06g0142100 | - | Detail |
| C2H6g03882 | 6:1,609,422-1,610,072 | - | C1H6g15081 | - | LOC_Os06g04990 | Os06g0142200 | - | Detail |
| C2H6g29967 | 6:1,615,084-1,615,611 | - | C1H6g30995 | - | LOC_Os06g05000 | Os06g0142300 | - | Detail |
| C2H6g10296 | 6:1,622,811-1,623,389 | - | C1H6g18923 | - | LOC_Os06g05020 | Os06g0142400 | - | Detail |
| C2H6g07918 | 6:1,628,484-1,631,927 | + | C1H6g25792 | CX6g041298 | LOC_Os06g05050 | Os06g0142500 | - | Detail |
| C2H6g07121 | 6:1,635,275-1,640,239 | - | C1H6g15035 | CX6g042388 | LOC_Os06g05060 | Os06g0142600 | HD3B, Hd17, EF7, Ef7, OsELF3-1, OsELF3, ELF3_chr.6 | Detail |
| C2H6g10352 | 6:1,642,473-1,643,852 | - | C1H6g26949 | CX6g042647 | LOC_Os06g05070 | Os06g0142650 | MAK4 | Detail |
| C2H6g12414 | 6:1,644,837-1,647,316 | - | C1H6g04865 | CX6g043519 | LOC_Os06g05080 | Os06g0142700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |