| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02571 | 1:266,603-267,964 | - | C2H1g18473 | CX1g000537 | LOC_Os01g01660 | Os01g0106400 | OsIRL | Detail |
| C1H1g31539 | 1:273,558-274,431 | + | - | - | - | - | - | Detail |
| C1H1g08578 | 1:276,733-317,533 | + | C2H1g04520 | CX1g002200 | LOC_Os01g01689 | Os01g0106700 | OsATM | Detail |
| C1H1g26239 | 1:318,110-320,304 | + | C2H1g12430 | CX1g002566 | LOC_Os01g01700 | Os01g0106800 | - | Detail |
| C1H1g28803 | 1:322,724-324,583 | + | C2H1g00316 | - | LOC_Os01g01700 | Os01g0106800 | - | Detail |
| C1H1g20881 | 1:325,169-331,118 | - | C2H1g28973 | CX1g001967 | LOC_Os01g01710 | Os01g0106900 | - | Detail |
| C1H1g09103 | 1:333,869-336,954 | - | C2H1g10506 | CX1g004612 | LOC_Os01g01720 | Os01g0107000 | - | Detail |
| C1H1g00684 | 1:340,559-345,048 | - | C2H1g12735 | CX1g000779 | LOC_Os01g01740 | Os01g0747400 | - | Detail |
| C1H1g04409 | 1:358,928-362,219 | + | C2H1g04613 | CX1g003507 | LOC_Os01g01780 | Os01g0107700 | - | Detail |
| C1H1g12454 | 1:362,633-366,812 | - | C2H1g02243 | CX1g000457 | LOC_Os01g01790 | Os01g0107900 | - | Detail |
| C1H1g21020 | 1:368,870-378,122 | + | C2H1g12942 | CX1g004339 | LOC_Os01g01800 | Os01g0108000 | - | Detail |
| C1H1g12709 | 1:381,696-393,285 | + | C2H1g09033 | CX1g004858 | LOC_Os01g01830 | Os01g0108200 | - | Detail |
| C1H1g08683 | 1:399,536-401,623 | + | C2H1g30343 | CX1g006268 | LOC_Os01g01840 | Os01g0108400 | - | Detail |
| C1H1g11414 | 1:408,973-411,122 | + | C2H1g23960 | CX1g002791 | LOC_Os01g01870 | Os01g0108600 | - | Detail |
| C1H1g06105 | 1:415,048-417,018 | + | C2H1g02003 | CX1g005800 | LOC_Os01g01890 | Os01g0108800 | - | Detail |
| C1H1g07324 | 1:421,056-427,923 | + | C2H1g26140 | CX1g006717 | LOC_Os01g01920 | Os01g0109300 | WFSL1, ST3, OsSAMHD1 | Detail |
| C1H1g25672 | 1:429,993-430,709 | + | C2H1g04643 | CX1g002043 | LOC_Os01g01940 | Os01g0109500 | - | Detail |
| C1H1g19369 | 1:433,026-442,555 | - | C2H1g05030 | CX1g002189 | LOC_Os01g01960 | Os01g0109700 | - | Detail |
| C1H1g20420 | 1:444,437-446,287 | - | C2H1g22311 | CX1g007051 | LOC_Os01g01970 | Os01g0109750 | - | Detail |
| C1H1g31250 | 1:461,794-467,397 | + | C2H1g21187 | CX1g002134 | LOC_Os01g02000 | Os01g0110100 | PHO1;1, OsPHO1;1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g04812 | 7:3,362,721-3,363,292 | - | C1H7g05391 | - | LOC_Os07g07210 | Os07g0166500 | - | Detail |
| C2H7g28873 | 7:3,364,278-3,365,063 | + | - | CX7g049771 | LOC_Os07g07220 | Os07g0166600 | - | Detail |
| C2H7g21113 | 7:3,372,218-3,377,554 | + | C1H7g22643 | CX7g050299 | LOC_Os07g07230 | Os07g0166700 | - | Detail |
| C2H7g24489 | 7:3,378,202-3,382,690 | - | C1H7g20925 | CX7g046894 | LOC_Os07g07240 | Os07g0166800 | - | Detail |
| C2H7g08428 | 7:3,384,620-3,388,471 | + | C1H7g28784 | CX7g046720 | LOC_Os07g07250 | Os07g0167000 | - | Detail |
| C2H7g21719 | 7:3,389,829-3,399,664 | + | C1H7g30457 | CX7g047112 | LOC_Os07g07260 | Os07g0167100 | - | Detail |
| C2H7g21242 | 7:3,399,880-3,403,317 | - | C1H7g24882 | CX7g050218 | LOC_Os07g07270 | Os07g0167200 | - | Detail |
| C2H7g17486 | 7:3,405,181-3,406,222 | + | C1H7g19293 | CX7g046909 | LOC_Os07g07280 | Os07g0167300 | - | Detail |
| C2H7g01212 | 7:3,407,075-3,407,880 | - | - | CX7g046021 | LOC_Os07g07290 | - | - | Detail |
| C2H7g26058 | 7:3,422,001-3,433,120 | - | C1H7g09549 | CX7g046534 | LOC_Os07g07310 | Os07g0168000 | - | Detail |
| C2H7g05911 | 7:3,438,855-3,439,565 | + | C1H7g21910 | CX7g050336 | LOC_Os07g07320 | Os07g0168300 | - | Detail |
| C2H7g07731 | 7:3,446,052-3,449,403 | + | C1H7g13022 | CX7g050193 | LOC_Os07g07340 | Os07g0168600 | - | Detail |
| C2H7g07319 | 7:3,453,575-3,454,060 | - | C1H7g31137 | CX7g046780 | LOC_Os07g07350 | Os07g0168800 | ZFP177 | Detail |
| C2H7g27350 | 7:3,455,357-3,455,814 | - | - | - | - | Os07g0168900 | - | Detail |
| C2H7g20995 | 7:3,460,388-3,460,855 | - | C1H7g17268 | CX7g047999 | LOC_Os07g07400 | Os07g0169500 | - | Detail |
| C2H7g14770 | 7:3,464,631-3,466,476 | + | C1H7g28232 | CX7g046317 | LOC_Os07g07410 | Os07g0169600 | - | Detail |
| C2H7g13120 | 7:3,467,276-3,469,828 | + | C1H7g27542 | CX7g046653 | LOC_Os07g07420 | Os07g0169700 | GA20OX3, OsGA20ox3, ga20ox3 | Detail |
| C2H7g17670 | 7:3,471,817-3,472,923 | - | C1H7g28416 | CX7g048611 | LOC_Os07g07430 | Os07g0169800 | - | Detail |
| C2H7g21046 | 7:3,475,592-3,476,377 | + | C1H7g01686 | CX7g048338 | LOC_Os07g07440 | Os07g0170000 | - | Detail |
| C2H7g13629 | 7:3,476,719-3,478,395 | - | C1H7g19349 | CX7g049509 | LOC_Os07g07450 | Os07g0561500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |