| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H11g19241 | 11:3,507,960-3,512,265 | + | C2H11g04878 | CX11g014057 | LOC_Os11g08100 | Os11g0183900 | - | Detail |
| C1H11g29158 | 11:3,516,036-3,516,833 | + | - | - | - | Os11g0184100 | - | Detail |
| C1H11g30718 | 11:3,521,013-3,522,019 | + | C2H11g19537 | - | LOC_Os11g08120 | Os11g0184300 | - | Detail |
| C1H11g24574 | 11:3,524,850-3,525,511 | + | C2H11g08483 | CX9g055632 | LOC_Os09g31430 | Os11g0184300 | - | Detail |
| C1H11g21737 | 11:3,525,578-3,526,383 | + | C2H11g15003 | CX11g013993 | LOC_Os11g08160 | Os11g0184300 | - | Detail |
| C1H11g22341 | 11:3,530,988-3,536,589 | + | C2H11g02113 | CX11g014057 | LOC_Os11g08190 | Os11g0184600 | - | Detail |
| C1H11g14966 | 11:3,541,222-3,541,640 | + | C2H11g09425 | - | LOC_Os11g08180 | Os11g0184600 | - | Detail |
| C1H11g29947 | 11:3,542,233-3,542,923 | + | C2H11g25637 | - | LOC_Os11g08190 | Os11g0184600 | - | Detail |
| C1H11g30694 | 11:3,545,393-3,548,317 | + | C2H11g25637 | - | LOC_Os11g08190 | Os11g0183900 | - | Detail |
| C1H11g25147 | 11:3,550,336-3,552,402 | + | C2H11g25637 | CX11g014057 | LOC_Os11g08200 | Os11g0184800 | OsAsp1 | Detail |
| C1H11g09597 | 11:3,554,634-3,556,836 | - | C2H11g02712 | CX11g013912 | LOC_Os11g08210 | Os11g0184900 | NAC5, OsNAC5, NAC71, ONAC071, ONAC009, ONAC9, ONAC020, ONAC20, OnNAC5*, OnNAC5, OsNAC5/ONAC009 | Detail |
| C1H11g06049 | 11:3,567,206-3,568,194 | + | C2H11g30229 | CX11g014413 | LOC_Os11g08220 | Os11g0185100 | - | Detail |
| C1H11g16668 | 11:3,569,196-3,569,507 | + | C2H11g30229 | CX11g010990 | LOC_Os11g08220 | Os11g0185100 | - | Detail |
| C1H11g22894 | 11:3,633,288-3,638,155 | + | C2H11g18389 | CX11g013131 | LOC_Os11g08300 | Os11g0186200 | - | Detail |
| C1H11g28283 | 11:3,639,438-3,642,896 | + | C2H11g28689 | CX11g014402 | LOC_Os11g08314 | Os11g0186300 | - | Detail |
| C1H11g04327 | 11:3,643,665-3,644,999 | + | C2H11g07463 | CX11g011762 | LOC_Os11g08314 | Os11g0186300 | - | Detail |
| C1H11g17958 | 11:3,645,662-3,655,613 | - | C2H11g08181 | CX11g012890 | LOC_Os11g08330 | Os11g0186400 | OsPolδ1 | Detail |
| C1H11g07924 | 11:3,660,820-3,661,307 | - | C2H11g08701 | CX11g011992 | - | - | - | Detail |
| C1H11g02795 | 11:3,665,691-3,667,687 | + | C2H11g25550 | CX11g012905 | LOC_Os11g08340 | Os11g0186500 | - | Detail |
| C1H11g17459 | 11:3,685,165-3,686,454 | + | C2H12g10711 | CX11g010865 | LOC_Os11g08370 | Os11g0186800 | OsPHT4;6-1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g07127 | 1:24,972,355-24,977,520 | + | C1H1g07251 | CX1g001461 | LOC_Os01g48900 | Os01g0681100 | - | Detail |
| C2H1g13127 | 1:24,978,962-24,984,114 | - | C1H1g21340 | CX1g007055 | LOC_Os01g48910 | Os01g0681200 | - | Detail |
| C2H1g29187 | 1:24,987,454-24,992,790 | - | C1H1g18369 | CX1g000478 | LOC_Os01g48920 | Os01g0681400 | ATG6A, OsATG6a | Detail |
| C2H1g15446 | 1:24,992,859-24,995,762 | + | C1H1g01190 | CX1g006805 | LOC_Os01g48930 | Os01g0681600 | - | Detail |
| C2H1g14692 | 1:25,005,253-25,017,023 | - | C1H1g12744 | CX1g000610 | LOC_Os01g48960 | Os01g0681900 | OsGOGAT1, NADH-GOGAT1 | Detail |
| C2H1g11093 | 1:25,032,090-25,036,165 | - | C1H1g07001 | CX1g000049 | LOC_Os01g48980 | Os01g0682200 | - | Detail |
| C2H1g19818 | 1:25,038,330-25,042,038 | + | C1H1g06026 | CX1g000149 | LOC_Os01g48990 | Os01g0682500 | - | Detail |
| C2H1g30064 | 1:25,042,425-25,048,414 | + | C1H1g18921 | CX1g000149 | LOC_Os01g49000 | Os01g0683100 | - | Detail |
| C2H1g03389 | 1:25,066,487-25,070,291 | + | C1H1g07773 | - | LOC_Os01g49010 | Os01g0683400 | OsORC4 | Detail |
| C2H1g19532 | 1:25,071,991-25,077,582 | - | C1H1g21597 | CX5g038117 | LOC_Os01g49024 | Os01g0683550 | - | Detail |
| C2H1g08995 | 1:25,078,940-25,080,482 | + | C1H1g21001 | CX1g002822 | LOC_Os01g49026 | Os01g0683600 | - | Detail |
| C2H1g03855 | 1:25,082,157-25,083,026 | + | C1H1g08336 | CX1g003922 | LOC_Os01g49030 | Os01g0683700 | - | Detail |
| C2H1g15370 | 1:25,126,110-25,129,635 | + | C1H1g07796 | CX1g000472 | LOC_Os01g49060 | Os01g0684800 | - | Detail |
| C2H1g12213 | 1:25,130,100-25,133,076 | - | C1H1g29982 | CX1g001799 | LOC_Os01g49120 | Os01g0684900 | - | Detail |
| C2H1g09209 | 1:25,137,634-25,141,087 | - | C1H1g11448 | CX1g003730 | LOC_Os01g49150 | Os01g0685200 | - | Detail |
| C2H1g29921 | 1:25,144,672-25,146,283 | + | C1H1g30171 | CX1g007197 | LOC_Os01g49160 | Os01g0685400 | RGN1 | Detail |
| C2H1g15034 | 1:25,156,413-25,167,727 | - | C1H1g13712 | CX1g004222 | LOC_Os01g49180 | Os01g0685500 | - | Detail |
| C2H1g05241 | 1:25,172,390-25,176,705 | + | C1H1g18062 | CX1g004551 | LOC_Os01g49190 | Os01g0685800 | - | Detail |
| C2H1g18560 | 1:25,177,765-25,182,302 | + | C1H1g18271 | CX1g003807 | LOC_Os01g49200 | Os01g0685900 | - | Detail |
| C2H1g28047 | 1:25,191,916-25,193,283 | + | C1H1g07342 | CX1g002173 | LOC_Os01g49230 | Os01g0686200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |