| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g30064 | 1:4,844,359-4,848,296 | - | C2H1g25446 | CX1g000033 | LOC_Os01g10450 | Os01g0201200 | - | Detail |
| C1H1g16523 | 1:4,877,117-4,878,002 | - | C2H1g03634 | CX1g002271 | LOC_Os01g10480 | Os01g0201500 | - | Detail |
| C1H1g23585 | 1:4,883,309-4,883,626 | - | C2H1g24699 | CX1g003008 | LOC_Os01g10490 | Os01g0201600 | OsGAE1 | Detail |
| C1H1g14400 | 1:4,883,733-4,884,400 | - | C2H1g28525 | CX1g003008 | LOC_Os01g10490 | Os01g0201600 | OsGAE1 | Detail |
| C1H1g15606 | 1:4,893,738-4,902,428 | - | C2H1g12459 | CX1g006928 | LOC_Os01g10504 | Os01g0201700 | RAG, MADS3, OsMADS3, OsMADS3(t), RMADS222, RAG1 | Detail |
| C1H1g13227 | 1:4,913,013-4,914,395 | - | C2H1g19665 | CX1g003430 | LOC_Os01g10520 | Os01g0201800 | - | Detail |
| C1H1g22249 | 1:4,924,675-4,932,481 | - | C2H1g09694 | CX1g006334 | LOC_Os01g10530 | Os01g0201900 | - | Detail |
| C1H1g17903 | 1:4,967,422-4,968,687 | + | C2H1g26674 | CX1g001589 | LOC_Os01g10580 | Os01g0202500 | - | Detail |
| C1H1g18982 | 1:4,974,967-4,975,794 | + | C2H1g25575 | - | - | Os01g0202601 | - | Detail |
| C1H1g22813 | 1:4,981,388-4,984,579 | + | C2H1g11027 | CX1g006160 | LOC_Os01g10590 | Os01g0202700 | - | Detail |
| C1H1g30411 | 1:4,991,095-4,994,109 | - | C2H1g23331 | CX1g001315 | LOC_Os01g10600 | Os01g0202800 | OsNIP1;2 | Detail |
| C1H1g09441 | 1:4,995,564-4,997,839 | - | C2H1g21358 | CX1g005369 | LOC_Os01g10610 | Os01g0203000 | - | Detail |
| C1H1g13068 | 1:5,003,013-5,004,957 | - | C2H1g27421 | CX1g004390 | LOC_Os01g10630 | Os01g0203300 | - | Detail |
| C1H1g30796 | 1:5,043,175-5,047,575 | - | C2H1g16705 | CX1g005785 | LOC_Os01g10690 | Os01g0204000 | - | Detail |
| C1H1g01843 | 1:5,051,683-5,063,908 | - | C2H1g09104 | - | - | - | - | Detail |
| C1H1g24281 | 1:5,065,518-5,068,602 | + | C2H1g06825 | CX1g003100 | LOC_Os01g10790 | Os01g0205100 | - | Detail |
| C1H1g05818 | 1:5,070,855-5,074,344 | + | C2H1g00620 | - | - | - | - | Detail |
| C1H1g15430 | 1:5,079,327-5,082,999 | + | C2H1g06825 | CX1g003100 | LOC_Os01g10790 | Os01g0205100 | - | Detail |
| C1H1g01247 | 1:5,083,533-5,086,781 | - | C2H1g29778 | CX1g002344 | LOC_Os01g10800 | Os01g0205200 | - | Detail |
| C1H1g30346 | 1:5,087,144-5,088,059 | + | C2H1g24453 | CX1g004381 | LOC_Os01g10810 | Os01g0205300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g14811 | 1:36,571,484-36,572,767 | - | C1H1g13348 | CX1g004383 | LOC_Os01g71060 | Os01g0936900 | - | Detail |
| C2H1g05119 | 1:36,575,181-36,576,422 | - | C1H1g22088 | CX1g000753 | LOC_Os01g71060 | Os01g0936900 | - | Detail |
| C2H1g02110 | 1:36,580,761-36,582,047 | - | C1H1g05005 | CX1g004383 | LOC_Os01g71060 | Os01g0936900 | - | Detail |
| C2H1g24708 | 1:36,583,797-36,585,074 | - | C1H1g06025 | CX1g004383 | LOC_Os01g71070 | Os01g0937000 | - | Detail |
| C2H1g13049 | 1:36,589,806-36,591,074 | - | C1H1g07177 | CX1g004383 | LOC_Os01g71080 | Os01g0937050 | OsCLP | Detail |
| C2H1g06509 | 1:36,594,664-36,597,572 | - | C1H1g12751 | CX1g004383 | LOC_Os01g71094 | Os01g0937200 | - | Detail |
| C2H1g15329 | 1:36,597,684-36,603,220 | - | C1H1g14403 | CX1g005296 | LOC_Os01g71114 | Os01g0937300 | - | Detail |
| C2H1g15529 | 1:36,608,443-36,615,875 | - | C1H1g12751 | CX1g004383 | LOC_Os01g71094 | Os01g0937200 | - | Detail |
| C2H1g08503 | 1:36,619,351-36,622,243 | - | C1H1g26750 | CX1g004383 | LOC_Os01g71106 | Os01g0536466 | - | Detail |
| C2H1g30429 | 1:36,623,351-36,625,142 | + | C1H1g17052 | CX1g000753 | LOC_Os01g71130 | Os01g0937500 | - | Detail |
| C2H1g19731 | 1:36,639,509-36,644,529 | + | C1H1g30231 | CX1g006762 | LOC_Os01g71180 | Os01g0938100 | - | Detail |
| C2H1g00426 | 1:36,649,874-36,655,351 | + | C1H1g07210 | CX1g000756 | LOC_Os01g71200 | Os01g0938200 | - | Detail |
| C2H1g14108 | 1:36,661,085-36,666,041 | - | C1H1g26126 | CX1g004308 | LOC_Os01g71220 | Os01g0938600 | - | Detail |
| C2H1g29372 | 1:36,673,349-36,676,236 | + | C1H1g10097 | CX1g004180 | LOC_Os01g71230 | Os01g0938900 | - | Detail |
| C2H1g06212 | 1:36,679,502-36,679,873 | + | C1H1g13399 | CX1g005905 | - | Os01g0939000 | - | Detail |
| C2H1g14120 | 1:36,680,983-36,683,631 | + | C1H1g17991 | CX1g004665 | LOC_Os01g71240 | Os01g0939100 | - | Detail |
| C2H1g25320 | 1:36,683,716-36,685,695 | + | C1H1g17991 | CX1g004665 | LOC_Os01g71240 | Os01g0939100 | - | Detail |
| C2H1g03097 | 1:36,685,771-36,687,433 | + | C1H1g17991 | CX1g004665 | LOC_Os01g71240 | Os01g0939100 | - | Detail |
| C2H1g07622 | 1:36,688,316-36,689,931 | - | C1H1g18399 | CX1g005484 | LOC_Os01g71250 | Os01g0939200 | - | Detail |
| C2H1g16653 | 1:36,691,216-36,694,264 | - | C1H1g15855 | CX1g002440 | LOC_Os01g71256 | Os01g0939300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |