| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g30064 | 1:4,844,359-4,848,296 | - | C2H1g25446 | CX1g000033 | LOC_Os01g10450 | Os01g0201200 | - | Detail |
| C1H1g16523 | 1:4,877,117-4,878,002 | - | C2H1g03634 | CX1g002271 | LOC_Os01g10480 | Os01g0201500 | - | Detail |
| C1H1g23585 | 1:4,883,309-4,883,626 | - | C2H1g24699 | CX1g003008 | LOC_Os01g10490 | Os01g0201600 | OsGAE1 | Detail |
| C1H1g14400 | 1:4,883,733-4,884,400 | - | C2H1g28525 | CX1g003008 | LOC_Os01g10490 | Os01g0201600 | OsGAE1 | Detail |
| C1H1g15606 | 1:4,893,738-4,902,428 | - | C2H1g12459 | CX1g006928 | LOC_Os01g10504 | Os01g0201700 | RAG, MADS3, OsMADS3, OsMADS3(t), RMADS222, RAG1 | Detail |
| C1H1g13227 | 1:4,913,013-4,914,395 | - | C2H1g19665 | CX1g003430 | LOC_Os01g10520 | Os01g0201800 | - | Detail |
| C1H1g22249 | 1:4,924,675-4,932,481 | - | C2H1g09694 | CX1g006334 | LOC_Os01g10530 | Os01g0201900 | - | Detail |
| C1H1g17903 | 1:4,967,422-4,968,687 | + | C2H1g26674 | CX1g001589 | LOC_Os01g10580 | Os01g0202500 | - | Detail |
| C1H1g18982 | 1:4,974,967-4,975,794 | + | C2H1g25575 | - | - | Os01g0202601 | - | Detail |
| C1H1g22813 | 1:4,981,388-4,984,579 | + | C2H1g11027 | CX1g006160 | LOC_Os01g10590 | Os01g0202700 | - | Detail |
| C1H1g30411 | 1:4,991,095-4,994,109 | - | C2H1g23331 | CX1g001315 | LOC_Os01g10600 | Os01g0202800 | OsNIP1;2 | Detail |
| C1H1g09441 | 1:4,995,564-4,997,839 | - | C2H1g21358 | CX1g005369 | LOC_Os01g10610 | Os01g0203000 | - | Detail |
| C1H1g13068 | 1:5,003,013-5,004,957 | - | C2H1g27421 | CX1g004390 | LOC_Os01g10630 | Os01g0203300 | - | Detail |
| C1H1g30796 | 1:5,043,175-5,047,575 | - | C2H1g16705 | CX1g005785 | LOC_Os01g10690 | Os01g0204000 | - | Detail |
| C1H1g01843 | 1:5,051,683-5,063,908 | - | C2H1g09104 | - | - | - | - | Detail |
| C1H1g24281 | 1:5,065,518-5,068,602 | + | C2H1g06825 | CX1g003100 | LOC_Os01g10790 | Os01g0205100 | - | Detail |
| C1H1g05818 | 1:5,070,855-5,074,344 | + | C2H1g00620 | - | - | - | - | Detail |
| C1H1g15430 | 1:5,079,327-5,082,999 | + | C2H1g06825 | CX1g003100 | LOC_Os01g10790 | Os01g0205100 | - | Detail |
| C1H1g01247 | 1:5,083,533-5,086,781 | - | C2H1g29778 | CX1g002344 | LOC_Os01g10800 | Os01g0205200 | - | Detail |
| C1H1g30346 | 1:5,087,144-5,088,059 | + | C2H1g24453 | CX1g004381 | LOC_Os01g10810 | Os01g0205300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g23172 | 1:26,139,335-26,143,274 | - | C1H1g08444 | CX1g007119 | LOC_Os01g51040 | Os01g0706700 | - | Detail |
| C2H1g02936 | 1:26,144,356-26,145,544 | - | C1H1g22596 | CX1g002628 | LOC_Os01g51050 | Os01g0706800 | - | Detail |
| C2H1g02706 | 1:26,148,767-26,154,889 | - | C1H1g15814 | CX1g001598 | LOC_Os01g51060 | Os01g0706900 | OsAH9 | Detail |
| C2H1g05617 | 1:26,164,238-26,167,099 | + | C1H1g28612 | CX1g002795 | LOC_Os01g51120 | Os01g0707300 | - | Detail |
| C2H1g03133 | 1:26,175,383-26,178,058 | - | C1H1g30984 | - | - | - | - | Detail |
| C2H1g10394 | 1:26,199,178-26,204,544 | + | C1H1g10432 | CX1g000030 | LOC_Os01g51154 | Os01g0708000 | OsTRBF3 | Detail |
| C2H1g22584 | 1:26,207,188-26,207,723 | - | C1H1g24014 | - | - | - | - | Detail |
| C2H1g18203 | 1:26,209,214-26,213,011 | + | C1H1g02406 | CX1g003591 | LOC_Os01g51190 | Os01g0708300 | - | Detail |
| C2H1g14381 | 1:26,217,280-26,222,211 | + | C1H1g30931 | CX1g000162 | LOC_Os01g51200 | Os01g0570500 | - | Detail |
| C2H1g25316 | 1:26,223,399-26,225,462 | - | C1H1g26666 | CX1g006316 | LOC_Os01g51210 | Os01g0708500 | - | Detail |
| C2H1g12880 | 1:26,227,599-26,232,539 | + | C1H1g09706 | CX1g002967 | LOC_Os01g51220 | Os01g0708600 | - | Detail |
| C2H1g01487 | 1:26,233,376-26,235,484 | - | C1H1g20984 | CX1g004777 | LOC_Os01g51230 | Os01g0708700 | - | Detail |
| C2H1g13173 | 1:26,241,159-26,245,353 | + | C1H1g24856 | CX1g006124 | LOC_Os01g51250 | Os01g0708900 | - | Detail |
| C2H1g26791 | 1:26,251,187-26,252,718 | + | C1H1g05640 | CX1g004079 | LOC_Os01g51260 | Os01g0709000 | Os2R_MYB13 | Detail |
| C2H1g16264 | 1:26,259,315-26,262,284 | + | C1H1g15780 | CX1g006026 | LOC_Os01g51280 | Os01g0709400 | - | Detail |
| C2H1g08623 | 1:26,263,061-26,272,241 | - | C1H1g31428 | CX1g007054 | LOC_Os01g51290 | Os01g0709500 | - | Detail |
| C2H1g14661 | 1:26,281,485-26,287,173 | + | C1H1g30106 | CX1g001712 | LOC_Os01g51300 | Os01g0710000 | OsFVE, OsRBAP1, BGSD-2 | Detail |
| C2H1g15591 | 1:26,302,236-26,303,283 | - | C1H1g02532 | CX1g003098 | LOC_Os01g51330 | Os01g0710300 | - | Detail |
| C2H1g11214 | 1:26,310,323-26,313,300 | - | C1H1g29431 | CX1g000647 | LOC_Os01g51360 | Os01g0710700 | - | Detail |
| C2H1g10466 | 1:26,314,586-26,320,247 | + | C1H1g22136 | CX1g002177 | LOC_Os01g51380 | Os01g0711000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |