| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H11g06013 | 11:2,557,097-2,558,581 | + | C2H11g20846 | CX11g011270 | LOC_Os11g06230 | Os11g0161100 | - | Detail |
| C1H11g09539 | 11:2,560,615-2,562,075 | + | C2H11g20846 | CX11g011270 | LOC_Os11g06234 | Os11g0161133 | - | Detail |
| C1H11g19783 | 11:2,564,507-2,564,821 | - | C2H11g03105 | CX6g041678 | LOC_Os11g06240 | Os11g0161200 | - | Detail |
| C1H11g31690 | 11:2,573,672-2,576,027 | + | C2H11g20846 | CX11g011270 | LOC_Os11g06290 | Os11g0161000 | - | Detail |
| C1H11g21648 | 11:2,577,846-2,579,267 | + | C2H11g11903 | CX11g011270 | LOC_Os11g06300 | Os11g0161800 | - | Detail |
| C1H11g27307 | 11:2,583,076-2,583,735 | + | C2H11g07059 | - | LOC_Os11g06310 | Os11g0161900 | OsVTL4 | Detail |
| C1H11g25451 | 11:2,584,340-2,587,862 | - | C2H11g12056 | - | LOC_Os11g06320 | Os11g0162000 | - | Detail |
| C1H11g18421 | 11:2,597,198-2,599,193 | + | C2H11g24027 | CX11g014284 | LOC_Os11g06370 | Os11g0162900 | - | Detail |
| C1H11g30283 | 11:2,611,763-2,613,710 | - | C2H11g26879 | CX11g012450 | LOC_Os11g06340 | Os11g0162200 | - | Detail |
| C1H11g02065 | 11:2,616,408-2,618,892 | + | C2H11g23120 | CX11g015033 | LOC_Os11g06390 | Os11g0163100 | - | Detail |
| C1H11g04190 | 11:2,622,300-2,624,718 | + | C2H11g19653 | CX11g012639 | LOC_Os11g06410 | Os11g0163500 | OsGTγ-2, OsGTgamma-2 | Detail |
| C1H11g16178 | 11:2,628,117-2,632,529 | + | C2H11g14859 | CX11g011683 | LOC_Os11g06420 | Os11g0163600 | - | Detail |
| C1H11g03095 | 11:2,642,867-2,644,126 | + | - | CX11g013924 | LOC_Os11g06440 | Os11g0163800 | - | Detail |
| C1H11g08758 | 11:2,648,611-2,650,821 | + | C2H11g14523 | CX11g012043 | LOC_Os11g06610 | Os11g0166450 | - | Detail |
| C1H11g13349 | 11:2,655,904-2,658,088 | - | C2H11g15467 | CX11g012091 | LOC_Os11g06630 | Os11g0164200 | - | Detail |
| C1H11g30670 | 11:2,667,065-2,668,507 | + | C2H11g30443 | CX11g012043 | LOC_Os11g06595 | Os11g0166450 | - | Detail |
| C1H11g24966 | 11:2,673,461-2,675,930 | - | C2H11g17104 | CX11g012644 | LOC_Os11g06650 | Os11g0166800 | - | Detail |
| C1H11g00608 | 11:2,685,829-2,688,622 | + | C2H11g23342 | CX11g014738 | LOC_Os11g06670 | Os11g0167200 | - | Detail |
| C1H11g07314 | 11:2,689,845-2,693,747 | - | C2H11g21586 | CX11g011541 | LOC_Os11g06680 | Os11g0167300 | - | Detail |
| C1H11g06481 | 11:2,694,748-2,699,647 | + | C2H11g08424 | CX11g013421 | LOC_Os11g06690 | Os11g0167500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g05995 | 3:23,353,840-23,360,112 | + | C1H3g08255 | CX3g025417 | LOC_Os03g44760 | Os03g0650400 | OsAM1 | Detail |
| C2H3g04123 | 3:23,365,568-23,368,654 | + | C1H3g04288 | CX3g029305 | LOC_Os03g44780 | Os03g0650700 | - | Detail |
| C2H3g25934 | 3:23,376,058-23,379,647 | + | C1H3g26002 | CX3g030102 | LOC_Os03g44800 | Os03g0650800 | - | Detail |
| C2H3g09215 | 3:23,380,760-23,383,326 | - | C1H3g15894 | CX3g025882 | LOC_Os03g44810 | Os03g0650900 | OsNLA2 | Detail |
| C2H3g18405 | 3:23,389,822-23,395,637 | + | C1H3g26796 | CX3g030028 | LOC_Os03g44820 | Os03g0651000 | - | Detail |
| C2H3g28118 | 3:23,392,076-23,399,652 | - | C1H3g28349 | CX3g026647 | LOC_Os03g44830 | Os03g0651100 | - | Detail |
| C2H3g18007 | 3:23,412,866-23,416,601 | - | C1H3g24505 | CX3g025530 | LOC_Os03g44840 | Os03g0651300 | - | Detail |
| C2H3g06423 | 3:23,419,178-23,419,672 | + | C1H3g26171 | - | - | - | - | Detail |
| C2H3g02024 | 3:23,425,394-23,426,265 | + | C1H3g24453 | CX3g026588 | LOC_Os03g44860 | - | - | Detail |
| C2H3g28657 | 3:23,436,378-23,436,686 | + | C1H3g26409 | CX3g025130 | LOC_Os03g44880 | Os03g0651800 | - | Detail |
| C2H3g03221 | 3:23,454,058-23,464,939 | + | C1H3g29368 | CX3g027235 | LOC_Os03g44900 | Os03g0652100 | - | Detail |
| C2H3g22550 | 3:23,466,563-23,467,393 | - | C1H3g01838 | CX3g031191 | - | - | - | Detail |
| C2H3g28037 | 3:23,481,141-23,481,464 | - | C1H3g10492 | CX3g027235 | LOC_Os03g44900 | Os03g0652600 | - | Detail |
| C2H3g20973 | 3:23,481,653-23,484,565 | - | C1H3g17818 | CX3g030705 | LOC_Os03g44950 | - | - | Detail |
| C2H3g17941 | 3:23,514,588-23,520,530 | - | C1H3g02859 | CX3g027629 | LOC_Os03g45120 | Os03g0653900 | - | Detail |
| C2H3g06696 | 3:23,550,319-23,556,097 | - | C1H3g07189 | CX3g027165 | LOC_Os03g45170 | Os03g0654400 | - | Detail |
| C2H3g22615 | 3:23,558,639-23,563,286 | - | C1H3g30470 | CX3g029174 | LOC_Os03g45180 | Os03g0654500 | - | Detail |
| C2H3g20364 | 3:23,564,019-23,565,466 | - | C1H3g08581 | CX3g031252 | LOC_Os03g45194 | Os03g0325500 | - | Detail |
| C2H3g01388 | 3:23,566,588-23,571,569 | - | C1H3g11388 | CX3g030732 | LOC_Os03g45194 | Os03g0654600 | NOL | Detail |
| C2H3g23313 | 3:23,573,325-23,581,245 | - | C1H3g03137 | CX3g025719 | LOC_Os09g01375 | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |