| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H11g06013 | 11:2,557,097-2,558,581 | + | C2H11g20846 | CX11g011270 | LOC_Os11g06230 | Os11g0161100 | - | Detail |
| C1H11g09539 | 11:2,560,615-2,562,075 | + | C2H11g20846 | CX11g011270 | LOC_Os11g06234 | Os11g0161133 | - | Detail |
| C1H11g19783 | 11:2,564,507-2,564,821 | - | C2H11g03105 | CX6g041678 | LOC_Os11g06240 | Os11g0161200 | - | Detail |
| C1H11g31690 | 11:2,573,672-2,576,027 | + | C2H11g20846 | CX11g011270 | LOC_Os11g06290 | Os11g0161000 | - | Detail |
| C1H11g21648 | 11:2,577,846-2,579,267 | + | C2H11g11903 | CX11g011270 | LOC_Os11g06300 | Os11g0161800 | - | Detail |
| C1H11g27307 | 11:2,583,076-2,583,735 | + | C2H11g07059 | - | LOC_Os11g06310 | Os11g0161900 | OsVTL4 | Detail |
| C1H11g25451 | 11:2,584,340-2,587,862 | - | C2H11g12056 | - | LOC_Os11g06320 | Os11g0162000 | - | Detail |
| C1H11g18421 | 11:2,597,198-2,599,193 | + | C2H11g24027 | CX11g014284 | LOC_Os11g06370 | Os11g0162900 | - | Detail |
| C1H11g30283 | 11:2,611,763-2,613,710 | - | C2H11g26879 | CX11g012450 | LOC_Os11g06340 | Os11g0162200 | - | Detail |
| C1H11g02065 | 11:2,616,408-2,618,892 | + | C2H11g23120 | CX11g015033 | LOC_Os11g06390 | Os11g0163100 | - | Detail |
| C1H11g04190 | 11:2,622,300-2,624,718 | + | C2H11g19653 | CX11g012639 | LOC_Os11g06410 | Os11g0163500 | OsGTγ-2, OsGTgamma-2 | Detail |
| C1H11g16178 | 11:2,628,117-2,632,529 | + | C2H11g14859 | CX11g011683 | LOC_Os11g06420 | Os11g0163600 | - | Detail |
| C1H11g03095 | 11:2,642,867-2,644,126 | + | - | CX11g013924 | LOC_Os11g06440 | Os11g0163800 | - | Detail |
| C1H11g08758 | 11:2,648,611-2,650,821 | + | C2H11g14523 | CX11g012043 | LOC_Os11g06610 | Os11g0166450 | - | Detail |
| C1H11g13349 | 11:2,655,904-2,658,088 | - | C2H11g15467 | CX11g012091 | LOC_Os11g06630 | Os11g0164200 | - | Detail |
| C1H11g30670 | 11:2,667,065-2,668,507 | + | C2H11g30443 | CX11g012043 | LOC_Os11g06595 | Os11g0166450 | - | Detail |
| C1H11g24966 | 11:2,673,461-2,675,930 | - | C2H11g17104 | CX11g012644 | LOC_Os11g06650 | Os11g0166800 | - | Detail |
| C1H11g00608 | 11:2,685,829-2,688,622 | + | C2H11g23342 | CX11g014738 | LOC_Os11g06670 | Os11g0167200 | - | Detail |
| C1H11g07314 | 11:2,689,845-2,693,747 | - | C2H11g21586 | CX11g011541 | LOC_Os11g06680 | Os11g0167300 | - | Detail |
| C1H11g06481 | 11:2,694,748-2,699,647 | + | C2H11g08424 | CX11g013421 | LOC_Os11g06690 | Os11g0167500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g11612 | 5:23,993,173-23,996,983 | - | C1H5g18110 | CX5g038739 | LOC_Os05g49840 | Os05g0574100 | - | Detail |
| C2H5g16314 | 5:24,000,921-24,001,379 | + | C1H5g16150 | CX5g037745 | LOC_Os05g49860 | Os05g0574300 | - | Detail |
| C2H5g21858 | 5:24,003,730-24,007,222 | - | C1H5g12972 | CX5g037549 | LOC_Os05g49880 | Os05g0574400 | OsMDH5.1 | Detail |
| C2H5g16147 | 5:24,009,255-24,011,493 | - | C1H5g25768 | CX5g040904 | LOC_Os05g49890 | Os05g0574500 | OsRAN2 | Detail |
| C2H5g14802 | 5:24,012,225-24,013,787 | - | C1H5g25442 | CX5g039116 | LOC_Os05g49900 | Os05g0574600 | - | Detail |
| C2H5g28664 | 5:24,016,529-24,018,941 | - | C1H5g28327 | CX5g037295 | LOC_Os05g49910 | Os05g0574700 | - | Detail |
| C2H5g08357 | 5:24,019,865-24,022,483 | + | C1H5g15373 | CX5g038047 | LOC_Os05g49920 | Os05g0574800 | - | Detail |
| C2H5g12970 | 5:24,027,588-24,029,081 | + | C1H5g30973 | CX5g037894 | LOC_Os05g49930 | Os05g0574900 | OsSLRL2 | Detail |
| C2H5g07594 | 5:24,034,325-24,034,762 | + | C1H5g05078 | - | LOC_Os05g49940 | Os05g0575000 | OsCV, CV | Detail |
| C2H5g26414 | 5:24,038,916-24,045,425 | + | C1H5g17869 | CX5g039203 | LOC_Os05g49970 | Os05g0575300 | - | Detail |
| C2H5g13759 | 5:24,047,133-24,049,807 | + | C1H5g06409 | CX5g038622 | LOC_Os05g49980 | Os05g0575400 | - | Detail |
| C2H5g08017 | 5:24,068,430-24,069,536 | - | - | - | LOC_Os05g50070 | Os05g0575800 | - | Detail |
| C2H5g19912 | 5:24,076,956-24,078,119 | + | C1H5g15356 | CX5g039044 | LOC_Os05g50080 | Os05g0576300 | - | Detail |
| C2H5g01394 | 5:24,079,797-24,082,409 | - | C1H5g03069 | CX5g038256 | LOC_Os05g50090 | Os05g0576500 | - | Detail |
| C2H5g03271 | 5:24,083,853-24,084,383 | - | C1H5g16819 | CX5g039524 | LOC_Os05g50100 | Os05g0576600 | - | Detail |
| C2H5g25211 | 5:24,087,806-24,088,330 | - | C1H5g27061 | CX5g039163 | LOC_Os05g50110 | Os05g0576700 | - | Detail |
| C2H5g20547 | 5:24,090,084-24,096,130 | + | C1H5g01077 | CX5g040507 | LOC_Os05g50120 | Os05g0576800 | OsMPK17 | Detail |
| C2H5g06181 | 5:24,099,183-24,102,128 | + | C1H5g03330 | CX5g036723 | LOC_Os05g50130 | - | - | Detail |
| C2H5g24762 | 5:24,103,038-24,105,309 | - | C1H5g30459 | CX5g040604 | LOC_Os05g50140 | Os05g0576900 | - | Detail |
| C2H5g04718 | 5:24,107,087-24,108,169 | + | C1H5g03603 | CX5g039826 | LOC_Os07g39990 | Os05g0123100 | OsGT43A | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |