| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H11g08746 | 11:2,196,093-2,202,662 | + | C2H11g00074 | CX11g014305 | LOC_Os11g05690 | Os11g0155500 | - | Detail |
| C1H11g08770 | 11:2,206,739-2,217,938 | - | C2H11g24402 | CX11g012702 | LOC_Os11g05700 | Os11g0155600 | - | Detail |
| C1H11g12106 | 11:2,225,152-2,225,562 | - | C2H6g14276 | CX5g040190 | LOC_Os11g05730 | Os11g0155900 | - | Detail |
| C1H11g28489 | 11:2,232,322-2,233,300 | - | C2H11g09017 | CX11g014855 | LOC_Os11g05740 | Os11g0156000 | - | Detail |
| C1H11g05994 | 11:2,240,240-2,242,703 | - | C2H11g09154 | CX11g011526 | LOC_Os11g05760 | Os11g0156200 | - | Detail |
| C1H11g04397 | 11:2,245,128-2,245,733 | - | C2H11g18532 | CX11g011526 | LOC_Os11g05760 | Os11g0156200 | - | Detail |
| C1H11g06583 | 11:2,254,989-2,256,035 | + | C2H11g14091 | CX11g012202 | LOC_Os11g05770 | Os11g0156300 | - | Detail |
| C1H11g13340 | 11:2,255,282-2,256,587 | - | C2H11g03190 | - | - | - | - | Detail |
| C1H11g21354 | 11:2,263,711-2,264,448 | - | C2H11g14091 | CX11g012359 | LOC_Os11g05780 | Os11g0156401 | - | Detail |
| C1H11g09416 | 11:2,276,188-2,278,803 | + | C2H11g26572 | CX11g014685 | LOC_Os11g05800 | Os11g0156600 | OsHLP1 | Detail |
| C1H11g14924 | 11:2,281,586-2,282,128 | - | C2H11g26260 | CX11g014005 | LOC_Os11g05810 | Os11g0156700 | - | Detail |
| C1H11g23992 | 11:2,291,898-2,294,928 | + | C2H11g17043 | CX11g014622 | LOC_Os11g05820 | Os11g0156800 | - | Detail |
| C1H11g19423 | 11:2,307,354-2,311,198 | - | C2H11g03643 | CX11g014819 | LOC_Os11g05840 | - | - | Detail |
| C1H11g07528 | 11:2,315,985-2,324,059 | - | C2H11g01502 | CX11g014819 | LOC_Os11g05840 | Os11g0157000 | - | Detail |
| C1H11g28730 | 11:2,335,776-2,342,819 | + | C2H11g25204 | CX11g013845 | LOC_Os11g05850 | Os11g0157100 | - | Detail |
| C1H11g14785 | 11:2,345,089-2,345,721 | - | - | CX11g012178 | LOC_Os11g05860 | Os11g0157200 | - | Detail |
| C1H11g10293 | 11:2,353,861-2,357,133 | - | C2H11g00937 | CX11g012997 | LOC_Os11g05870 | Os11g0157300 | - | Detail |
| C1H11g09172 | 11:2,364,765-2,369,850 | - | C2H11g03577 | CX11g012722 | LOC_Os11g05880 | Os11g0157400 | - | Detail |
| C1H11g26585 | 11:2,376,878-2,381,495 | + | C2H11g17290 | CX11g012160 | LOC_Os11g05930 | Os11g0157600 | OsPRR59 | Detail |
| C1H11g06678 | 11:2,382,275-2,382,850 | + | C2H11g01437 | CX11g014763 | LOC_Os11g05935 | Os11g0157701 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g01980 | 3:28,769,869-28,772,490 | - | C1H3g09903 | CX3g026536 | LOC_Os03g55320 | Os03g0761100 | - | Detail |
| C2H3g06672 | 3:28,774,318-28,777,794 | - | C1H3g13690 | CX3g026537 | LOC_Os03g55330 | Os03g0761200 | - | Detail |
| C2H3g12099 | 3:28,793,894-28,798,830 | + | C1H3g30024 | CX3g028991 | LOC_Os03g55360 | Os03g0761700 | - | Detail |
| C2H3g13639 | 3:28,801,419-28,805,273 | + | C1H3g06743 | CX3g030441 | LOC_Os03g55380 | Os03g0761900 | - | Detail |
| C2H3g22708 | 3:28,807,938-28,813,613 | - | C1H3g04781 | CX3g027555 | LOC_Os03g55389 | Os03g0762000 | HD6, Hd6, Hd6(t)*, OsCKA2, OSCKA2 | Detail |
| C2H3g06124 | 3:28,815,348-28,816,132 | - | C1H3g13239 | CX3g029923 | LOC_Os03g55400 | Os03g0762100 | - | Detail |
| C2H3g03334 | 3:28,824,236-28,825,529 | + | C1H3g15054 | CX3g027273 | LOC_Os03g55410 | Os03g0762300 | - | Detail |
| C2H3g28441 | 3:28,829,093-28,831,783 | + | C1H3g30848 | CX3g028085 | LOC_Os03g55420 | Os03g0762400 | - | Detail |
| C2H3g23566 | 3:28,836,777-28,837,357 | + | C1H3g21651 | CX3g025152 | LOC_Os07g02460 | Os03g0206400 | - | Detail |
| C2H3g15621 | 3:28,837,367-28,837,765 | + | - | - | LOC_Os03g55430 | Os03g0762500 | - | Detail |
| C2H3g21236 | 3:28,841,343-28,843,221 | - | C1H3g30412 | CX3g028267 | LOC_Os03g55450 | Os03g0762700 | - | Detail |
| C2H3g28904 | 3:28,851,569-28,855,786 | + | C1H3g31602 | CX3g027974 | LOC_Os03g55470 | Os03g0762900 | - | Detail |
| C2H3g20218 | 3:28,861,702-28,866,046 | + | C1H3g12054 | CX3g028419 | LOC_Os03g55490 | Os03g0763000 | - | Detail |
| C2H3g15832 | 3:28,890,305-28,892,884 | + | C1H3g10528 | CX3g027285 | LOC_Os03g55530 | Os03g0764000 | GSE3 | Detail |
| C2H3g26472 | 3:28,905,764-28,912,939 | - | C1H3g07992 | CX3g027062 | LOC_Os03g55560 | Os03g0764300 | OstMAPKKK5 | Detail |
| C2H3g25717 | 3:28,919,148-28,926,059 | + | C1H3g08783 | CX3g027539 | LOC_Os03g55570 | Os03g0764550 | - | Detail |
| C2H3g13812 | 3:28,935,297-28,937,445 | + | C1H3g17565 | CX3g029766 | LOC_Os03g55590 | Os03g0764600 | OsHHO3 | Detail |
| C2H3g16680 | 3:28,942,582-28,947,621 | + | C1H3g10682 | CX3g030582 | LOC_Os03g55600 | Os03g0764800 | SAPK8, OsSAPK8 | Detail |
| C2H3g01981 | 3:28,965,418-28,968,051 | + | C1H3g29826 | CX3g027424 | LOC_Os03g55620 | Os03g0765000 | - | Detail |
| C2H3g10671 | 3:28,969,609-28,972,477 | + | C1H3g07713 | CX3g029687 | LOC_Os03g55630 | Os03g0765100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |