| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H11g20827 | 11:1,880,549-1,880,986 | + | - | CX11g011072 | LOC_Os11g05170 | Os11g0149200 | - | Detail |
| C1H11g03572 | 11:1,882,937-1,883,529 | + | C2H11g10430 | CX11g011466 | LOC_Os11g05180 | Os11g0149300 | - | Detail |
| C1H11g21412 | 11:1,894,459-1,894,995 | + | C2H11g03500 | CX11g012236 | LOC_Os11g05190 | Os11g0149400 | - | Detail |
| C1H11g25603 | 11:1,905,520-1,907,046 | + | C2H11g02363 | CX11g014435 | LOC_Os11g05240 | Os11g0149900 | - | Detail |
| C1H11g03894 | 11:1,909,223-1,912,449 | + | C2H11g22001 | CX11g012865 | LOC_Os11g05260 | Os11g0150100 | - | Detail |
| C1H11g02675 | 11:1,918,212-1,918,979 | + | C2H11g05326 | - | - | Os11g0150200 | - | Detail |
| C1H11g28497 | 11:1,920,137-1,921,159 | + | C2H11g05326 | CX11g011287 | LOC_Os11g05280 | Os12g0149000 | - | Detail |
| C1H11g16763 | 11:1,924,212-1,925,059 | - | C2H11g13418 | CX11g012127 | LOC_Os11g05290 | Os11g0150400 | - | Detail |
| C1H11g06810 | 11:1,926,050-1,928,436 | - | C2H11g13788 | CX11g015012 | LOC_Os11g05300 | Os11g0150450 | - | Detail |
| C1H11g23530 | 11:1,936,494-1,941,354 | + | C2H11g06058 | CX11g012630 | LOC_Os11g05320 | Os11g0150700 | OsAGC21 | Detail |
| C1H11g18720 | 11:1,945,061-1,949,373 | - | C2H11g30294 | CX11g014605 | LOC_Os11g05340 | Os11g0151002 | OsIQM7 | Detail |
| C1H11g21389 | 11:1,951,941-1,952,693 | - | - | - | - | Os06g0248300 | - | Detail |
| C1H11g21139 | 11:1,957,839-1,959,103 | + | C2H11g15706 | CX11g013216 | LOC_Os11g05360 | - | - | Detail |
| C1H11g10773 | 11:1,961,573-1,962,034 | - | C2H1g01847 | CX11g014098 | LOC_Os11g05370 | Os11g0151300 | - | Detail |
| C1H11g08052 | 11:1,972,334-1,973,896 | - | C2H11g18072 | CX11g011592 | LOC_Os11g05380 | Os11g0151400 | CYP94C2a, OsCYP94C2a | Detail |
| C1H11g26524 | 11:1,997,763-2,001,174 | - | C2H11g23919 | CX11g014831 | LOC_Os11g05390 | Os11g0151500 | - | Detail |
| C1H11g02541 | 11:2,002,915-2,005,103 | - | C2H11g17842 | CX11g011180 | LOC_Os11g05394 | Os12g0256300 | - | Detail |
| C1H11g08544 | 11:2,005,889-2,006,894 | - | C2H11g03090 | CX11g011180 | - | Os11g0151600 | - | Detail |
| C1H11g26192 | 11:2,007,546-2,010,467 | - | C2H11g15601 | CX11g013038 | LOC_Os11g05400 | Os11g0151700 | OsPAP21b, PAP21B | Detail |
| C1H11g06966 | 11:2,014,841-2,019,151 | + | C2H11g19908 | CX11g010866 | LOC_Os11g05410 | Os11g0151800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g07424 | 9:19,218,434-19,222,530 | + | C1H9g13374 | CX9g057785 | LOC_Os09g39220 | Os09g0565600 | - | Detail |
| C2H9g05946 | 9:19,224,305-19,225,510 | + | C1H9g26902 | CX9g055093 | LOC_Os09g39230 | Os09g0565700 | - | Detail |
| C2H9g19055 | 9:19,229,128-19,230,339 | + | C1H9g23958 | CX9g057620 | LOC_Os09g39260 | Os09g0566050 | - | Detail |
| C2H9g15395 | 9:19,231,647-19,237,669 | - | C1H9g25655 | CX9g056260 | LOC_Os09g39270 | Os09g0566100 | - | Detail |
| C2H9g06176 | 9:19,245,063-19,247,290 | - | C1H9g18076 | CX9g056096 | LOC_Os09g39310 | Os09g0567000 | - | Detail |
| C2H9g22038 | 9:19,251,638-19,252,552 | - | C1H9g18076 | CX9g056096 | LOC_Os09g39310 | Os09g0567000 | - | Detail |
| C2H9g09064 | 9:19,256,964-19,263,700 | - | C1H9g21987 | CX9g056096 | LOC_Os09g39320 | Os09g0566550 | - | Detail |
| C2H9g08732 | 9:19,265,273-19,266,640 | - | C1H9g31128 | CX9g056096 | LOC_Os09g39350 | Os09g0567000 | - | Detail |
| C2H9g17992 | 9:19,273,423-19,277,358 | + | C1H9g04890 | CX9g056849 | LOC_Os09g39380 | Os09g0567300 | MDHAR, OsMDHAR, OsMDAR3, OsMDHAR3 | Detail |
| C2H9g25680 | 9:19,277,859-19,280,562 | + | C1H9g13266 | CX9g058049 | LOC_Os09g39390 | Os09g0567366 | - | Detail |
| C2H9g00653 | 9:19,282,863-19,285,337 | + | C1H9g16090 | CX9g056022 | LOC_Os09g39400 | Os09g0567400 | - | Detail |
| C2H9g10548 | 9:19,289,359-19,295,560 | + | C1H9g25909 | CX9g057497 | LOC_Os09g39410 | Os09g0567500 | - | Detail |
| C2H9g15634 | 9:19,296,740-19,301,777 | + | C1H9g01897 | CX9g055257 | LOC_Os09g39420 | Os09g0567700 | - | Detail |
| C2H9g07527 | 9:19,301,792-19,305,375 | - | C1H9g27590 | CX9g058075 | LOC_Os09g39430 | Os09g0567800 | - | Detail |
| C2H9g28844 | 9:19,309,307-19,311,969 | - | C1H9g04610 | CX9g058045 | LOC_Os09g39440 | Os09g0567900 | - | Detail |
| C2H9g14034 | 9:19,314,286-19,318,425 | + | C1H9g06631 | CX9g055030 | LOC_Os09g39462 | Os09g0568000 | - | Detail |
| C2H9g07303 | 9:19,319,765-19,321,171 | + | C1H9g18800 | CX9g055723 | LOC_Os09g39474 | Os09g0568100 | - | Detail |
| C2H9g14146 | 9:19,321,995-19,323,316 | - | C1H9g25533 | CX9g055477 | LOC_Os09g39490 | Os09g0568200 | - | Detail |
| C2H9g28333 | 9:19,333,286-19,334,722 | - | C1H9g27100 | CX9g057377 | LOC_Os09g39540 | Os09g0568800 | - | Detail |
| C2H9g03364 | 9:19,334,994-19,336,916 | + | C1H9g30656 | CX9g055404 | LOC_Os09g39550 | Os09g0568900 | IF1-2, IF<sub>1</sub>-2 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |