| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H11g17952 | 11:1,609,839-1,610,426 | + | C2H11g06832 | CX11g014863 | LOC_Os12g04360 | Os11g0141400 | - | Detail |
| C1H11g11783 | 11:1,612,622-1,617,436 | - | C2H11g05590 | CX11g013264 | LOC_Os11g04570 | Os11g0141500 | - | Detail |
| C1H11g20784 | 11:1,626,556-1,629,355 | + | C2H11g04411 | CX11g013882 | LOC_Os11g04600 | Os11g0141900 | OsBOP2, NH5 | Detail |
| C1H11g21384 | 11:1,642,470-1,643,860 | + | C2H11g25781 | CX11g013509 | LOC_Os11g04660 | Os11g0142400 | - | Detail |
| C1H11g18499 | 11:1,646,307-1,652,072 | + | C2H11g09115 | CX11g011239 | LOC_Os11g04670 | Os11g0142500 | OsIPMS1 | Detail |
| C1H11g06875 | 11:1,661,894-1,665,032 | - | C2H12g06757 | CX11g011829 | LOC_Os11g04710 | Os11g0143200 | OsCPD1, CYP90A3, OsCPD1/CYP90A3 | Detail |
| C1H11g13552 | 11:1,668,502-1,670,105 | + | C2H11g05956 | CX11g012154 | LOC_Os11g04720 | Os11g0143300 | OSRR9, OsRR9, A-type RR | Detail |
| C1H11g20131 | 11:1,674,645-1,684,260 | - | C2H11g05899 | CX11g012125 | LOC_Os11g04740 | Os11g0143500 | - | Detail |
| C1H11g30834 | 11:1,684,543-1,685,763 | + | C2H11g08039 | CX11g013032 | LOC_Os11g04750 | Os11g0143600 | - | Detail |
| C1H11g10034 | 11:1,687,648-1,689,027 | - | C2H11g21620 | CX11g013076 | LOC_Os11g04760 | Os11g0143700 | - | Detail |
| C1H11g23225 | 11:1,690,026-1,690,325 | + | C2H12g08204 | CX11g012793 | LOC_Os11g04770 | Os11g0141400 | - | Detail |
| C1H11g19404 | 11:1,691,441-1,691,812 | + | C2H12g06925 | CX11g012793 | LOC_Os12g04570 | Os11g0144500 | - | Detail |
| C1H11g09971 | 11:1,692,643-1,692,951 | + | C2H12g08204 | CX11g012793 | LOC_Os11g04770 | Os11g0141400 | - | Detail |
| C1H11g19129 | 11:1,705,398-1,708,061 | + | C2H11g27777 | CX11g011186 | LOC_Os11g04830 | Os11g0144900 | - | Detail |
| C1H11g05659 | 11:1,708,812-1,712,638 | - | C2H11g14012 | CX11g013599 | LOC_Os11g04840 | Os11g0145000 | - | Detail |
| C1H11g09875 | 11:1,715,093-1,715,863 | - | C2H11g00679 | CX11g013962 | LOC_Os11g04850 | Os11g0145100 | - | Detail |
| C1H11g07081 | 11:1,717,207-1,718,694 | - | C2H11g19618 | CX11g011751 | LOC_Os11g04860 | Os11g0145200 | - | Detail |
| C1H11g05178 | 11:1,725,999-1,726,220 | + | C2H11g12348 | CX11g013310 | LOC_Os11g04880 | Os11g0145400 | OsUBL5.2 | Detail |
| C1H11g11818 | 11:1,728,978-1,731,707 | + | C2H11g03418 | CX11g011320 | LOC_Os11g04890 | Os11g0145700 | - | Detail |
| C1H11g20406 | 11:1,732,709-1,734,407 | - | C2H11g03421 | CX11g013204 | LOC_Os11g04935 | Os11g0146550 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g03864 | 4:17,871,628-17,873,686 | + | C1H4g24085 | CX4g035191 | LOC_Os04g34580 | Os04g0423100 | - | Detail |
| C2H4g17951 | 4:17,879,303-17,880,593 | - | C1H4g00658 | CX4g036598 | LOC_Os04g34600 | Os04g0423400 | - | Detail |
| C2H4g22006 | 4:17,890,980-17,894,847 | - | C1H4g11899 | - | LOC_Os04g34610 | Os04g0423600 | - | Detail |
| C2H4g00874 | 4:17,895,798-17,898,626 | - | C1H4g15226 | CX4g033739 | LOC_Os04g34620 | Os04g0423700 | - | Detail |
| C2H4g03351 | 4:17,908,155-17,914,582 | + | C1H4g04108 | CX4g034218 | LOC_Os04g34670 | Os04g0424200 | OsDNA2_17 | Detail |
| C2H4g04488 | 4:17,923,184-17,934,131 | + | C1H4g29348 | CX4g036298 | LOC_Os04g34720 | Os04g0425100 | - | Detail |
| C2H4g00219 | 4:18,080,336-18,084,525 | - | C1H4g11803 | CX4g033205 | LOC_Os04g34930 | Os04g0428900 | - | Detail |
| C2H4g00750 | 4:18,086,479-18,086,956 | + | - | - | - | - | - | Detail |
| C2H4g26513 | 4:18,093,620-18,097,339 | - | C1H4g21640 | CX4g034835 | LOC_Os04g34940 | Os04g0428950 | - | Detail |
| C2H4g12069 | 4:18,104,574-18,105,341 | - | C1H4g19022 | CX4g033075 | LOC_Os04g34970 | Os04g0429050 | - | Detail |
| C2H4g26187 | 4:18,114,199-18,119,077 | + | C1H4g13260 | CX4g034286 | LOC_Os04g34976 | Os04g0429100 | OsSET19, SDG708 | Detail |
| C2H4g07693 | 4:18,120,597-18,124,915 | + | C1H4g08749 | CX4g032065 | LOC_Os04g34984 | Os04g0429200 | - | Detail |
| C2H4g22507 | 4:18,128,308-18,130,484 | + | C1H4g29079 | CX4g035546 | LOC_Os04g35000 | Os04g0429300 | - | Detail |
| C2H4g06383 | 4:18,133,318-18,135,969 | + | C1H4g16663 | CX4g034846 | LOC_Os04g35010 | Os04g0429400 | - | Detail |
| C2H4g12633 | 4:18,136,330-18,140,119 | - | C1H4g22025 | CX4g036089 | LOC_Os04g35020 | Os04g0429500 | OsCSLH2 | Detail |
| C2H4g11608 | 4:18,142,876-18,148,234 | - | C1H4g20886 | CX4g036148 | LOC_Os04g35030 | Os04g0429600 | OsCSLH3 | Detail |
| C2H4g05154 | 4:18,179,492-18,186,937 | + | C1H4g07556 | CX4g035578 | LOC_Os04g35060 | Os04g0429800 | - | Detail |
| C2H4g06183 | 4:18,189,233-18,191,460 | + | - | CX4g031764 | - | Os04g0429900 | - | Detail |
| C2H4g17424 | 4:18,193,204-18,196,081 | + | C1H4g15837 | CX4g032788 | LOC_Os04g35080 | Os04g0430000 | - | Detail |
| C2H4g03094 | 4:18,199,297-18,201,801 | + | C1H4g08281 | CX2g020503 | LOC_Os04g35090 | Os04g0430100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |