| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H11g17952 | 11:1,609,839-1,610,426 | + | C2H11g06832 | CX11g014863 | LOC_Os12g04360 | Os11g0141400 | - | Detail |
| C1H11g11783 | 11:1,612,622-1,617,436 | - | C2H11g05590 | CX11g013264 | LOC_Os11g04570 | Os11g0141500 | - | Detail |
| C1H11g20784 | 11:1,626,556-1,629,355 | + | C2H11g04411 | CX11g013882 | LOC_Os11g04600 | Os11g0141900 | OsBOP2, NH5 | Detail |
| C1H11g21384 | 11:1,642,470-1,643,860 | + | C2H11g25781 | CX11g013509 | LOC_Os11g04660 | Os11g0142400 | - | Detail |
| C1H11g18499 | 11:1,646,307-1,652,072 | + | C2H11g09115 | CX11g011239 | LOC_Os11g04670 | Os11g0142500 | OsIPMS1 | Detail |
| C1H11g06875 | 11:1,661,894-1,665,032 | - | C2H12g06757 | CX11g011829 | LOC_Os11g04710 | Os11g0143200 | OsCPD1, CYP90A3, OsCPD1/CYP90A3 | Detail |
| C1H11g13552 | 11:1,668,502-1,670,105 | + | C2H11g05956 | CX11g012154 | LOC_Os11g04720 | Os11g0143300 | OSRR9, OsRR9, A-type RR | Detail |
| C1H11g20131 | 11:1,674,645-1,684,260 | - | C2H11g05899 | CX11g012125 | LOC_Os11g04740 | Os11g0143500 | - | Detail |
| C1H11g30834 | 11:1,684,543-1,685,763 | + | C2H11g08039 | CX11g013032 | LOC_Os11g04750 | Os11g0143600 | - | Detail |
| C1H11g10034 | 11:1,687,648-1,689,027 | - | C2H11g21620 | CX11g013076 | LOC_Os11g04760 | Os11g0143700 | - | Detail |
| C1H11g23225 | 11:1,690,026-1,690,325 | + | C2H12g08204 | CX11g012793 | LOC_Os11g04770 | Os11g0141400 | - | Detail |
| C1H11g19404 | 11:1,691,441-1,691,812 | + | C2H12g06925 | CX11g012793 | LOC_Os12g04570 | Os11g0144500 | - | Detail |
| C1H11g09971 | 11:1,692,643-1,692,951 | + | C2H12g08204 | CX11g012793 | LOC_Os11g04770 | Os11g0141400 | - | Detail |
| C1H11g19129 | 11:1,705,398-1,708,061 | + | C2H11g27777 | CX11g011186 | LOC_Os11g04830 | Os11g0144900 | - | Detail |
| C1H11g05659 | 11:1,708,812-1,712,638 | - | C2H11g14012 | CX11g013599 | LOC_Os11g04840 | Os11g0145000 | - | Detail |
| C1H11g09875 | 11:1,715,093-1,715,863 | - | C2H11g00679 | CX11g013962 | LOC_Os11g04850 | Os11g0145100 | - | Detail |
| C1H11g07081 | 11:1,717,207-1,718,694 | - | C2H11g19618 | CX11g011751 | LOC_Os11g04860 | Os11g0145200 | - | Detail |
| C1H11g05178 | 11:1,725,999-1,726,220 | + | C2H11g12348 | CX11g013310 | LOC_Os11g04880 | Os11g0145400 | OsUBL5.2 | Detail |
| C1H11g11818 | 11:1,728,978-1,731,707 | + | C2H11g03418 | CX11g011320 | LOC_Os11g04890 | Os11g0145700 | - | Detail |
| C1H11g20406 | 11:1,732,709-1,734,407 | - | C2H11g03421 | CX11g013204 | LOC_Os11g04935 | Os11g0146550 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H11g30515 | 11:13,000,028-13,000,342 | - | C1H11g20213 | - | - | - | - | Detail |
| C2H11g30379 | 11:13,023,388-13,024,785 | - | C1H11g31810 | CX11g011037 | LOC_Os11g25510 | Os11g0441900 | OsRLCK326 | Detail |
| C2H11g19315 | 11:13,031,075-13,031,587 | + | C1H11g09866 | CX11g011666 | LOC_Os11g25454 | Os11g0441500 | - | Detail |
| C2H11g19618 | 11:13,036,079-13,037,602 | + | C1H11g02200 | CX11g011666 | LOC_Os11g25454 | Os11g0441500 | - | Detail |
| C2H11g21927 | 11:13,050,336-13,051,405 | + | C1H11g29057 | CX11g014609 | LOC_Os11g25440 | Os11g0440422 | - | Detail |
| C2H11g15961 | 11:13,102,431-13,108,914 | + | C1H11g25006 | CX11g014987 | LOC_Os11g25330 | Os11g0440200 | - | Detail |
| C2H11g25324 | 11:13,126,348-13,132,180 | - | C1H11g30108 | CX11g013855 | LOC_Os11g25230 | Os11g0443700 | - | Detail |
| C2H11g03192 | 11:13,132,219-13,132,677 | - | C1H11g21262 | CX11g013855 | LOC_Os11g25700 | Os11g0443700 | - | Detail |
| C2H11g07950 | 11:13,175,115-13,181,402 | - | C1H11g05188 | CX11g012957 | LOC_Os11g25230 | Os11g0438700 | - | Detail |
| C2H11g16214 | 11:13,195,447-13,198,321 | - | C1H11g12913 | CX11g012957 | LOC_Os11g25700 | Os11g0443700 | - | Detail |
| C2H11g07005 | 11:13,230,764-13,231,786 | + | C1H11g04749 | CX11g011904 | LOC_Os11g25780 | Os11g0444700 | - | Detail |
| C2H11g06487 | 11:13,250,852-13,251,625 | + | C1H11g19485 | CX11g013403 | LOC_Os11g25780 | Os11g0444700 | - | Detail |
| C2H11g02987 | 11:13,259,484-13,262,347 | - | C1H11g28391 | - | - | - | - | Detail |
| C2H11g27394 | 11:13,270,424-13,270,829 | + | C1H11g31601 | - | - | - | - | Detail |
| C2H11g29847 | 11:13,308,123-13,312,186 | + | C1H11g10558 | CX11g011625 | LOC_Os11g25920 | Os11g0446000 | RSS3 | Detail |
| C2H11g23151 | 11:13,331,834-13,351,845 | + | C1H11g07790 | CX11g013991 | LOC_Os11g25980 | Os11g0446500 | - | Detail |
| C2H11g07636 | 11:13,405,269-13,409,277 | - | C1H11g09251 | CX11g013291 | - | - | - | Detail |
| C2H11g29907 | 11:13,410,322-13,410,668 | + | C1H11g30298 | - | - | - | - | Detail |
| C2H11g20908 | 11:13,415,442-13,422,489 | + | C1H11g14144 | CX11g012501 | LOC_Os11g26030 | Os11g0447300 | - | Detail |
| C2H11g17659 | 11:13,454,166-13,461,818 | + | C1H11g04234 | CX11g012981 | LOC_Os11g26130 | Os11g0448000 | OsWSS1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |