| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g20387 | 1:4,615,648-4,621,016 | - | C2H1g18174 | CX1g005780 | LOC_Os01g10050 | Os01g0197200 | - | Detail |
| C1H1g24747 | 1:4,625,322-4,627,722 | + | C2H1g17197 | CX1g005121 | LOC_Os01g10080 | Os01g0197400 | - | Detail |
| C1H1g23699 | 1:4,630,848-4,633,095 | - | C2H1g12602 | CX1g002532 | LOC_Os01g10100 | Os01g0197500 | - | Detail |
| C1H1g02388 | 1:4,638,822-4,643,241 | - | C2H1g29964 | CX1g000181 | LOC_Os01g10110 | Os01g0197700 | Gn1a, OsCKX2 | Detail |
| C1H1g16458 | 1:4,652,985-4,684,621 | - | C2H1g14250 | CX1g006534 | LOC_Os01g10140 | Os01g0198000 | OsRDR4 | Detail |
| C1H1g16973 | 1:4,689,399-4,695,941 | - | C2H1g26620 | CX1g001693 | LOC_Os01g10150 | Os01g0198200 | - | Detail |
| C1H1g29548 | 1:4,706,450-4,708,184 | - | C2H1g23718 | CX1g002926 | LOC_Os01g10180 | Os01g0198500 | - | Detail |
| C1H1g25179 | 1:4,741,911-4,746,181 | - | C2H1g26709 | CX1g006691 | LOC_Os01g10250 | Os01g0199400 | - | Detail |
| C1H1g11604 | 1:4,749,569-4,750,411 | + | - | CX1g002814 | - | Os01g0644500 | - | Detail |
| C1H1g07163 | 1:4,752,722-4,753,306 | - | C2H1g26843 | CX1g002407 | LOC_Os01g10260 | Os01g0199700 | - | Detail |
| C1H1g01459 | 1:4,757,329-4,764,113 | + | C2H1g21983 | CX1g001007 | LOC_Os01g10280 | Os01g0199900 | - | Detail |
| C1H1g26995 | 1:4,765,555-4,767,963 | - | C2H1g11537 | CX1g006987 | LOC_Os01g10290 | Os01g0200000 | - | Detail |
| C1H1g02233 | 1:4,770,039-4,771,505 | + | C2H1g00798 | CX1g001007 | LOC_Os01g10280 | Os01g0199900 | - | Detail |
| C1H1g09040 | 1:4,774,525-4,774,752 | + | C2H1g29755 | - | - | - | - | Detail |
| C1H1g07309 | 1:4,781,266-4,786,250 | - | C2H1g25742 | CX1g001960 | LOC_Os01g10320 | Os01g0200300 | OsHB5 | Detail |
| C1H1g18253 | 1:4,790,093-4,796,908 | - | C2H1g13754 | CX1g004279 | LOC_Os01g10340 | Os01g0200400 | - | Detail |
| C1H1g19440 | 1:4,797,390-4,800,075 | + | C2H1g05709 | CX1g005266 | LOC_Os01g10350 | Os01g0200500 | - | Detail |
| C1H1g04932 | 1:4,817,503-4,818,352 | + | C2H1g10402 | - | LOC_Os01g10400 | Os01g0200700 | OsMT-3a | Detail |
| C1H1g30875 | 1:4,826,637-4,832,684 | + | C2H1g28750 | CX1g000013 | LOC_Os01g10430 | Os01g0201000 | - | Detail |
| C1H1g18217 | 1:4,841,173-4,842,832 | + | C2H1g28750 | CX1g006358 | LOC_Os01g10440 | Os01g0201100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g12443 | 3:5,464,485-5,475,655 | - | C1H3g16227 | CX3g029221 | LOC_Os03g11734 | Os03g0216700 | OsFRDL1 | Detail |
| C2H3g18755 | 3:5,482,141-5,484,964 | + | C1H3g24567 | CX3g029021 | LOC_Os03g11760 | Os03g0216800 | - | Detail |
| C2H3g21216 | 3:5,489,324-5,493,700 | + | C1H3g18611 | CX3g025795 | LOC_Os03g11770 | Os03g0216900 | - | Detail |
| C2H3g13077 | 3:5,494,224-5,494,622 | - | C1H3g15471 | CX3g025145 | LOC_Os03g11780 | Os03g0217000 | - | Detail |
| C2H3g17874 | 3:5,498,744-5,504,625 | + | C1H3g25970 | CX3g026533 | LOC_Os03g11890 | Os03g0218300 | - | Detail |
| C2H3g10730 | 3:5,505,014-5,509,299 | - | C1H3g04450 | CX3g031320 | LOC_Os03g11900 | Os03g0218400 | OsMST4 | Detail |
| C2H3g22152 | 3:5,514,907-5,518,091 | - | C1H3g10632 | CX3g030309 | LOC_Os03g11910 | Os03g0218500 | - | Detail |
| C2H3g13924 | 3:5,534,286-5,537,026 | + | C1H3g06308 | CX3g025032 | LOC_Os03g11950 | Os03g0219100 | OsSec14-26 | Detail |
| C2H3g24481 | 3:5,540,547-5,543,282 | - | C1H3g24825 | CX3g027163 | LOC_Os03g11960 | Os03g0219200 | OsCSD3 | Detail |
| C2H3g03285 | 3:5,543,764-5,547,541 | - | C1H3g11590 | CX3g028374 | LOC_Os03g11970 | Os03g0219300 | - | Detail |
| C2H3g25818 | 3:5,548,401-5,551,001 | - | C1H3g20877 | CX3g028318 | LOC_Os03g11980 | Os03g0219400 | - | Detail |
| C2H3g26156 | 3:5,552,006-5,552,314 | + | C1H3g14036 | CX3g029685 | LOC_Os03g11990 | Os03g0219500 | - | Detail |
| C2H3g18310 | 3:5,554,652-5,557,006 | - | C1H3g26472 | CX3g028368 | LOC_Os03g12000 | Os03g0219700 | - | Detail |
| C2H3g00756 | 3:5,559,765-5,561,920 | + | C1H3g15777 | CX3g026437 | LOC_Os03g12010 | - | - | Detail |
| C2H3g05450 | 3:5,564,233-5,566,402 | + | C1H3g13535 | CX3g028610 | LOC_Os03g12020 | Os03g0219900 | - | Detail |
| C2H3g23972 | 3:5,571,435-5,573,474 | - | C1H3g10915 | CX3g026270 | LOC_Os03g12030 | Os03g0220100 | WSL4, CER6/CUT1, CER6, CUT1, OsCER6 | Detail |
| C2H3g23561 | 3:5,594,270-5,597,015 | + | C1H3g01618 | CX3g025137 | LOC_Os03g12110 | Os03g0221200 | - | Detail |
| C2H3g25327 | 3:5,597,584-5,605,170 | - | C1H3g06610 | CX3g025281 | LOC_Os03g12120 | Os03g0221300 | - | Detail |
| C2H3g25299 | 3:5,608,099-5,612,075 | + | C1H3g09947 | CX3g028100 | LOC_Os03g12140 | Os03g0221500 | - | Detail |
| C2H3g19033 | 3:5,615,133-5,617,670 | + | C1H3g29297 | CX3g026372 | LOC_Os03g12150 | Os03g0221700 | SDRLK-9 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |