| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g20387 | 1:4,615,648-4,621,016 | - | C2H1g18174 | CX1g005780 | LOC_Os01g10050 | Os01g0197200 | - | Detail |
| C1H1g24747 | 1:4,625,322-4,627,722 | + | C2H1g17197 | CX1g005121 | LOC_Os01g10080 | Os01g0197400 | - | Detail |
| C1H1g23699 | 1:4,630,848-4,633,095 | - | C2H1g12602 | CX1g002532 | LOC_Os01g10100 | Os01g0197500 | - | Detail |
| C1H1g02388 | 1:4,638,822-4,643,241 | - | C2H1g29964 | CX1g000181 | LOC_Os01g10110 | Os01g0197700 | Gn1a, OsCKX2 | Detail |
| C1H1g16458 | 1:4,652,985-4,684,621 | - | C2H1g14250 | CX1g006534 | LOC_Os01g10140 | Os01g0198000 | OsRDR4 | Detail |
| C1H1g16973 | 1:4,689,399-4,695,941 | - | C2H1g26620 | CX1g001693 | LOC_Os01g10150 | Os01g0198200 | - | Detail |
| C1H1g29548 | 1:4,706,450-4,708,184 | - | C2H1g23718 | CX1g002926 | LOC_Os01g10180 | Os01g0198500 | - | Detail |
| C1H1g25179 | 1:4,741,911-4,746,181 | - | C2H1g26709 | CX1g006691 | LOC_Os01g10250 | Os01g0199400 | - | Detail |
| C1H1g11604 | 1:4,749,569-4,750,411 | + | - | CX1g002814 | - | Os01g0644500 | - | Detail |
| C1H1g07163 | 1:4,752,722-4,753,306 | - | C2H1g26843 | CX1g002407 | LOC_Os01g10260 | Os01g0199700 | - | Detail |
| C1H1g01459 | 1:4,757,329-4,764,113 | + | C2H1g21983 | CX1g001007 | LOC_Os01g10280 | Os01g0199900 | - | Detail |
| C1H1g26995 | 1:4,765,555-4,767,963 | - | C2H1g11537 | CX1g006987 | LOC_Os01g10290 | Os01g0200000 | - | Detail |
| C1H1g02233 | 1:4,770,039-4,771,505 | + | C2H1g00798 | CX1g001007 | LOC_Os01g10280 | Os01g0199900 | - | Detail |
| C1H1g09040 | 1:4,774,525-4,774,752 | + | C2H1g29755 | - | - | - | - | Detail |
| C1H1g07309 | 1:4,781,266-4,786,250 | - | C2H1g25742 | CX1g001960 | LOC_Os01g10320 | Os01g0200300 | OsHB5 | Detail |
| C1H1g18253 | 1:4,790,093-4,796,908 | - | C2H1g13754 | CX1g004279 | LOC_Os01g10340 | Os01g0200400 | - | Detail |
| C1H1g19440 | 1:4,797,390-4,800,075 | + | C2H1g05709 | CX1g005266 | LOC_Os01g10350 | Os01g0200500 | - | Detail |
| C1H1g04932 | 1:4,817,503-4,818,352 | + | C2H1g10402 | - | LOC_Os01g10400 | Os01g0200700 | OsMT-3a | Detail |
| C1H1g30875 | 1:4,826,637-4,832,684 | + | C2H1g28750 | CX1g000013 | LOC_Os01g10430 | Os01g0201000 | - | Detail |
| C1H1g18217 | 1:4,841,173-4,842,832 | + | C2H1g28750 | CX1g006358 | LOC_Os01g10440 | Os01g0201100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g08417 | 2:2,303,926-2,311,206 | + | C1H2g01626 | CX2g022091 | LOC_Os02g05040 | Os02g0143200 | - | Detail |
| C2H2g29044 | 2:2,326,035-2,331,705 | + | C1H2g20326 | - | - | - | - | Detail |
| C2H2g15830 | 2:2,331,756-2,337,013 | + | C1H2g05324 | CX2g020466 | LOC_Os02g05310 | Os02g0146400 | - | Detail |
| C2H2g06566 | 2:2,337,342-2,342,078 | + | C1H2g12282 | CX2g020302 | LOC_Os02g05320 | Os02g0146500 | - | Detail |
| C2H2g08642 | 2:2,344,474-2,347,835 | + | C1H2g18676 | CX2g020037 | LOC_Os02g05330 | Os02g0146600 | OseIF4A | Detail |
| C2H2g07340 | 2:2,351,364-2,359,090 | + | C1H2g28134 | CX2g019608 | LOC_Os02g05340 | Os02g0146700 | - | Detail |
| C2H2g09483 | 2:2,361,124-2,361,397 | + | - | - | - | - | - | Detail |
| C2H2g18915 | 2:2,361,453-2,365,801 | + | C1H2g16834 | CX2g022971 | LOC_Os02g05365 | Os02g0147700 | - | Detail |
| C2H2g16746 | 2:2,367,495-2,373,379 | + | C1H2g17406 | CX2g021512 | LOC_Os02g05450 | Os02g0147800 | - | Detail |
| C2H2g05031 | 2:2,385,281-2,388,231 | + | C1H2g03103 | CX2g019418 | LOC_Os02g05470 | Os02g0148000 | - | Detail |
| C2H2g17640 | 2:2,389,987-2,393,274 | - | C1H2g11400 | CX2g020633 | LOC_Os02g05480 | Os02g0148100 | OsMAPK14, OsMPK3, OsMAPK33 | Detail |
| C2H2g26711 | 2:2,398,964-2,409,479 | + | C1H2g29322 | CX2g019230 | LOC_Os02g05490 | Os02g0148300 | - | Detail |
| C2H2g18156 | 2:2,410,020-2,412,843 | + | C1H2g28836 | CX2g021446 | LOC_Os02g05500 | Os02g0148400 | - | Detail |
| C2H2g30595 | 2:2,414,221-2,417,726 | + | C1H2g30011 | CX2g024552 | LOC_Os02g05510 | Os02g0148500 | - | Detail |
| C2H2g05427 | 2:2,418,499-2,420,814 | + | C1H2g12590 | CX2g023405 | LOC_Os02g05520 | Os02g0148600 | - | Detail |
| C2H2g26407 | 2:2,427,921-2,428,679 | + | C1H2g04797 | CX2g022702 | LOC_Os02g05600 | Os02g0149500 | - | Detail |
| C2H2g19048 | 2:2,434,730-2,439,152 | + | C1H2g28291 | CX2g024920 | LOC_Os02g05610 | Os02g0149600 | - | Detail |
| C2H2g28510 | 2:2,449,680-2,452,843 | + | C1H2g12792 | CX2g021786 | LOC_Os02g05630 | Os02g0149800 | OsPP2C10, PP2C10, OsPP18 | Detail |
| C2H2g30382 | 2:2,464,142-2,465,378 | + | C1H2g24221 | CX2g022836 | LOC_Os02g05640 | Os02g0149900 | - | Detail |
| C2H2g12819 | 2:2,467,140-2,469,636 | - | C1H2g30137 | CX2g019305 | LOC_Os02g05650 | Os02g0150000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |