| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H10g12878 | 10:23,088,812-23,089,829 | - | C2H10g10626 | CX10g009872 | - | - | - | Detail |
| C1H10g00048 | 10:23,089,887-23,094,118 | - | C2H10g11664 | CX10g009474 | - | - | - | Detail |
| C1H10g05759 | 10:23,100,671-23,107,264 | - | C2H10g22260 | CX10g007890 | - | - | - | Detail |
| C1H11g08731 | 11:3,229-4,165 | - | C2H11g03854 | CX11g012085 | - | - | - | Detail |
| C1H11g11120 | 11:29,315-30,816 | - | C2H12g28928 | CX11g013929 | LOC_Os11g01010 | Os11g0100100 | - | Detail |
| C1H11g00730 | 11:31,041-32,467 | + | C2H11g22941 | CX11g013663 | LOC_Os11g01020 | Os11g0100200 | - | Detail |
| C1H11g05406 | 11:33,860-36,832 | - | C2H11g24348 | CX11g012133 | LOC_Os11g01030 | Os11g0100300 | - | Detail |
| C1H11g01849 | 11:41,219-42,516 | - | C2H11g05219 | CX11g011920 | LOC_Os11g01040 | Os11g0100600 | - | Detail |
| C1H11g20414 | 11:44,241-46,131 | - | C2H11g01700 | CX11g013460 | - | - | - | Detail |
| C1H11g21634 | 11:60,424-67,106 | + | C2H11g04368 | CX11g011380 | LOC_Os12g01080 | Os11g0101200 | OsRpp30 | Detail |
| C1H11g08822 | 11:69,769-70,033 | + | C2H11g28209 | CX11g011380 | LOC_Os11g01090 | Os11g0101200 | OsRpp30 | Detail |
| C1H11g18239 | 11:95,272-95,883 | + | C2H11g29422 | CX11g010871 | LOC_Os11g01130 | Os11g0102100 | WOX3, OsWOX3, OsNS, OsPRS | Detail |
| C1H11g15262 | 11:106,826-121,261 | + | C2H11g14954 | CX11g013891 | LOC_Os11g01140 | Os11g0102200 | OsPHOT1a | Detail |
| C1H11g26777 | 11:121,531-122,942 | - | C2H11g23847 | CX11g011791 | - | - | - | Detail |
| C1H11g18261 | 11:123,493-123,828 | + | - | CX12g016657 | LOC_Os12g01150 | - | - | Detail |
| C1H11g17087 | 11:126,434-129,177 | + | C2H11g27510 | CX12g018399 | LOC_Os11g01154 | Os11g0102500 | - | Detail |
| C1H11g29895 | 11:130,442-133,692 | + | C2H11g08338 | CX11g011515 | LOC_Os11g01170 | Os11g0102600 | - | Detail |
| C1H11g00951 | 11:133,730-137,687 | - | C2H11g20080 | CX11g014575 | LOC_Os11g01180 | Os11g0102700 | - | Detail |
| C1H11g19879 | 11:140,707-147,513 | + | C2H11g17658 | CX11g011926 | LOC_Os12g01190 | Os11g0102800 | OsRINGC2-1 | Detail |
| C1H11g30247 | 11:147,642-155,207 | - | C2H11g14803 | CX11g014886 | LOC_Os11g01200 | Os11g0102900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g15484 | 5:7,890,974-7,891,445 | + | C1H5g13165 | CX5g039636 | LOC_Os05g16420 | Os05g0253200 | - | Detail |
| C2H5g22806 | 5:7,895,671-7,896,880 | + | C1H5g15820 | CX5g039636 | LOC_Os05g16430 | Os05g0258400 | - | Detail |
| C2H5g01726 | 5:7,941,836-7,945,464 | + | C1H5g26412 | CX5g040627 | LOC_Os05g16630 | Os05g0255600 | - | Detail |
| C2H5g24880 | 5:7,948,695-7,953,664 | + | C1H5g13724 | CX5g040616 | LOC_Os05g16640 | Os05g0255800 | - | Detail |
| C2H5g00655 | 5:7,958,651-7,964,493 | + | C1H5g15674 | CX5g039252 | LOC_Os05g16660 | Os05g0256000 | - | Detail |
| C2H5g00991 | 5:7,977,231-7,988,242 | + | C1H5g11784 | CX5g038401 | LOC_Os05g16670 | Os05g0256100 | - | Detail |
| C2H5g02628 | 5:8,033,195-8,043,634 | + | C1H5g15820 | CX5g040531 | LOC_Os05g16740 | Os05g0256500 | - | Detail |
| C2H5g15704 | 5:8,067,845-8,077,489 | + | C1H5g24182 | CX5g039056 | LOC_Os05g16824 | Os05g0257100 | - | Detail |
| C2H5g05784 | 5:8,082,123-8,082,681 | + | C1H5g28432 | CX3g030223 | - | - | - | Detail |
| C2H5g10404 | 5:8,098,939-8,099,751 | + | C1H5g13165 | CX5g036934 | LOC_Os05g16920 | Os05g0258400 | - | Detail |
| C2H5g09148 | 5:8,104,215-8,111,032 | + | C1H5g16401 | CX5g040223 | LOC_Os05g16930 | Os05g0258400 | - | Detail |
| C2H5g27501 | 5:8,138,685-8,139,056 | + | - | - | - | - | - | Detail |
| C2H5g12556 | 5:8,141,799-8,148,188 | + | C1H5g26063 | CX5g036934 | LOC_Os05g16420 | Os05g0263100 | - | Detail |
| C2H5g10804 | 5:8,170,876-8,171,133 | - | - | CX5g039686 | - | - | - | Detail |
| C2H5g26769 | 5:8,171,944-8,172,648 | + | - | - | - | - | - | Detail |
| C2H5g13404 | 5:8,177,378-8,182,945 | + | C1H5g31408 | CX5g038227 | LOC_Os05g16740 | Os05g0170300 | OsSGN3b | Detail |
| C2H5g07983 | 5:8,218,477-8,220,120 | + | C1H5g04336 | CX5g036934 | LOC_Os05g16420 | Os05g0263100 | - | Detail |
| C2H5g10995 | 5:8,225,710-8,232,617 | + | C1H5g15820 | CX5g036934 | LOC_Os05g16740 | Os05g0265500 | - | Detail |
| C2H5g15153 | 5:8,231,556-8,241,392 | - | - | CX5g038474 | LOC_Os05g16340 | - | - | Detail |
| C2H5g15568 | 5:8,238,240-8,242,797 | + | C1H5g11784 | CX5g040273 | LOC_Os05g17810 | Os05g0263100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |