| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g08369 | 1:3,748,267-3,754,055 | + | - | - | - | - | - | Detail |
| C1H1g04838 | 1:3,753,234-3,753,816 | - | - | - | - | Os01g0180850 | - | Detail |
| C1H1g04959 | 1:3,757,888-3,760,839 | + | C2H1g23466 | CX1g001824 | LOC_Os01g08570 | Os01g0180900 | PEG1 | Detail |
| C1H1g21972 | 1:3,762,367-3,763,817 | + | C2H1g27267 | CX1g001824 | LOC_Os01g08570 | Os01g0180900 | PEG1 | Detail |
| C1H1g29421 | 1:3,766,711-3,770,102 | - | C2H1g05619 | CX1g003309 | LOC_Os01g08580 | Os01g0181000 | - | Detail |
| C1H1g05943 | 1:3,771,927-3,774,296 | + | C2H1g09388 | CX1g005635 | LOC_Os01g08650 | Os01g0182100 | - | Detail |
| C1H1g28299 | 1:3,781,948-3,784,086 | - | C2H1g25325 | CX1g002190 | LOC_Os01g08660 | Os01g0182200 | OsSIP1 | Detail |
| C1H1g29977 | 1:3,791,796-3,793,847 | - | C2H1g08590 | CX1g002385 | LOC_Os01g08680 | Os01g0182400 | - | Detail |
| C1H1g01569 | 1:3,795,324-3,796,892 | + | C2H1g03691 | CX1g002667 | LOC_Os01g08690 | Os01g0182500 | - | Detail |
| C1H1g31395 | 1:3,797,942-3,807,166 | - | C2H1g22882 | CX1g006236 | LOC_Os01g08700 | Os01g0182600 | - | Detail |
| C1H1g26932 | 1:3,815,856-3,823,389 | - | C2H1g00342 | CX1g007148 | LOC_Os01g08710 | Os01g0182700 | OsWRKY102 | Detail |
| C1H1g19772 | 1:3,829,241-3,847,352 | + | C2H1g11324 | CX1g003782 | LOC_Os01g08750 | Os01g0182900 | - | Detail |
| C1H1g02231 | 1:3,849,071-3,851,240 | + | C2H1g13544 | CX1g000301 | LOC_Os01g08760 | Os01g0183000 | - | Detail |
| C1H1g18568 | 1:3,851,913-3,852,441 | + | C2H1g29251 | - | - | - | - | Detail |
| C1H1g31443 | 1:3,852,446-3,856,102 | + | C2H1g26288 | CX1g000793 | LOC_Os01g08770 | Os01g0183100 | - | Detail |
| C1H1g26343 | 1:3,856,799-3,861,807 | - | C2H1g17275 | CX1g007243 | LOC_Os01g08780 | Os01g0183300 | - | Detail |
| C1H1g28662 | 1:3,871,180-3,872,828 | + | C2H1g06833 | CX1g000827 | LOC_Os01g08800 | Os01g0183500 | - | Detail |
| C1H1g05359 | 1:3,877,677-3,879,576 | - | C2H1g27975 | CX1g000642 | LOC_Os01g08814 | Os01g0183633 | - | Detail |
| C1H1g07821 | 1:3,883,219-3,885,121 | - | C2H1g27122 | CX1g003359 | LOC_Os01g08820 | Os01g0218800 | - | Detail |
| C1H1g01391 | 1:3,888,109-3,890,234 | + | C2H1g25026 | CX1g004917 | LOC_Os01g08830 | Os01g0183800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g21290 | 3:27,144,259-27,147,001 | + | C1H3g02226 | CX3g025544 | LOC_Os03g51640 | Os03g0726400 | - | Detail |
| C2H3g14903 | 3:27,147,603-27,153,167 | - | C1H3g17376 | CX3g026178 | LOC_Os03g51650 | Os03g0726500 | - | Detail |
| C2H3g08813 | 3:27,169,931-27,170,535 | - | C1H3g20845 | CX3g028096 | LOC_Os03g51660 | Os03g0726700 | TAC3 | Detail |
| C2H3g26898 | 3:27,172,020-27,176,770 | - | C1H3g06495 | CX3g027385 | LOC_Os03g51670 | Os03g0726800 | - | Detail |
| C2H3g29132 | 3:27,179,651-27,182,095 | - | C1H3g20532 | - | LOC_Os03g51680 | Os03g0726900 | - | Detail |
| C2H3g04769 | 3:27,183,568-27,192,996 | - | C1H3g31203 | CX3g029433 | LOC_Os03g51690 | Os03g0673000 | - | Detail |
| C2H3g17627 | 3:27,208,745-27,210,481 | + | C1H3g28999 | CX3g029277 | LOC_Os03g51700 | Os03g0727100 | - | Detail |
| C2H3g26829 | 3:27,211,090-27,213,589 | - | C1H3g18589 | CX3g027566 | LOC_Os03g51710 | Os03g0673000 | - | Detail |
| C2H3g16078 | 3:27,216,284-27,217,020 | - | C1H3g28804 | CX3g027566 | LOC_Os03g51710 | Os03g0727200 | OSH3 | Detail |
| C2H3g10133 | 3:27,217,234-27,217,521 | - | C1H3g29743 | CX3g029433 | LOC_Os03g51710 | Os03g0727200 | OSH3 | Detail |
| C2H3g07488 | 3:27,240,550-27,242,793 | - | C1H3g10075 | CX3g027050 | LOC_Os03g51740 | Os03g0727600 | ACS1, ACC1*, OsACS1, Os-ACS1, ACC1 | Detail |
| C2H3g29705 | 3:27,270,239-27,277,690 | - | C1H3g08935 | CX3g031106 | LOC_Os03g51790 | Os03g0727900 | - | Detail |
| C2H3g15707 | 3:27,282,280-27,284,906 | + | C1H3g03486 | CX3g025416 | LOC_Os03g51830 | Os03g0728100 | - | Detail |
| C2H3g03478 | 3:27,295,426-27,297,246 | - | C1H3g05198 | CX3g027150 | LOC_Os03g51880 | Os03g0728600 | - | Detail |
| C2H3g14472 | 3:27,300,463-27,301,294 | - | C1H3g06505 | - | LOC_Os03g51890 | - | - | Detail |
| C2H3g03813 | 3:27,303,954-27,309,655 | - | C1H3g18395 | CX3g026995 | LOC_Os03g51890 | - | - | Detail |
| C2H3g12518 | 3:27,313,031-27,321,193 | + | C1H3g00993 | CX3g028728 | LOC_Os03g51900 | Os03g0728800 | - | Detail |
| C2H3g09824 | 3:27,322,187-27,326,035 | - | C1H3g31891 | CX3g029342 | LOC_Os03g51910 | Os03g0728900 | - | Detail |
| C2H3g06497 | 3:27,331,385-27,333,432 | - | C1H3g25139 | CX3g026713 | LOC_Os03g51920 | Os03g0729000 | - | Detail |
| C2H3g02798 | 3:27,336,292-27,337,983 | - | C1H3g11342 | CX3g029290 | LOC_Os03g51930 | Os03g0729100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |