| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g09579 | 1:3,570,739-3,571,429 | - | C2H1g16567 | - | LOC_Os01g08300 | Os01g0178300 | CDT3, OsCDT3 | Detail |
| C1H1g19644 | 1:3,572,965-3,575,327 | - | C2H1g05074 | CX1g003276 | LOC_Os01g08310 | Os01g0178400 | - | Detail |
| C1H1g13257 | 1:3,579,920-3,580,611 | - | C2H1g22659 | CX1g006768 | LOC_Os01g08320 | Os01g0178500 | OsIAA1 | Detail |
| C1H1g10164 | 1:3,593,509-3,597,282 | + | C2H1g00169 | CX1g004954 | LOC_Os01g08340 | Os01g0178700 | - | Detail |
| C1H1g01382 | 1:3,601,294-3,601,593 | - | C2H1g20461 | - | - | - | - | Detail |
| C1H1g05955 | 1:3,605,504-3,606,817 | - | C2H1g02703 | CX1g004634 | LOC_Os01g08380 | Os01g0179000 | - | Detail |
| C1H1g30989 | 1:3,614,516-3,618,904 | + | C2H1g07957 | CX1g003878 | LOC_Os01g08400 | Os01g0179200 | - | Detail |
| C1H1g00147 | 1:3,620,328-3,624,234 | + | C2H1g06451 | CX1g001124 | - | - | - | Detail |
| C1H1g14891 | 1:3,625,320-3,627,818 | + | C2H1g13456 | CX1g001347 | LOC_Os01g08410 | Os01g0179300 | - | Detail |
| C1H1g01282 | 1:3,628,896-3,642,156 | + | C2H1g18435 | CX1g003881 | LOC_Os01g08420 | Os01g0179400 | SSG4 | Detail |
| C1H1g03761 | 1:3,644,239-3,651,711 | + | C2H1g10454 | CX1g000976 | LOC_Os01g08430 | Os01g0179500 | - | Detail |
| C1H1g18226 | 1:3,656,227-3,657,669 | - | C2H1g20314 | CX1g000280 | LOC_Os01g08440 | Os01g0179600 | - | Detail |
| C1H1g03506 | 1:3,663,306-3,677,262 | - | C2H1g29431 | CX1g000517 | LOC_Os01g08464 | Os01g0179700 | - | Detail |
| C1H1g12207 | 1:3,679,975-3,681,531 | - | C2H1g21560 | CX1g007079 | LOC_Os01g08470 | Os01g0180000 | - | Detail |
| C1H1g15413 | 1:3,695,289-3,700,112 | - | C2H1g01209 | CX1g004041 | LOC_Os01g08510 | Os01g0180300 | - | Detail |
| C1H1g03096 | 1:3,702,299-3,703,799 | - | C2H1g26851 | CX1g001675 | LOC_Os01g08520 | Os01g0180400 | - | Detail |
| C1H1g16576 | 1:3,718,337-3,719,292 | - | C2H1g11735 | - | - | Os01g0963300 | - | Detail |
| C1H1g30826 | 1:3,721,398-3,722,846 | - | C2H1g01950 | - | - | - | - | Detail |
| C1H1g26098 | 1:3,724,056-3,733,645 | - | C2H1g00248 | CX1g004464 | LOC_Os01g08540 | Os01g0180600 | OsMSH7 | Detail |
| C1H1g08568 | 1:3,737,083-3,741,342 | - | C2H1g21704 | CX1g000897 | LOC_Os01g08550 | Os01g0180700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g00594 | 5:16,439,793-16,443,623 | + | C1H5g30717 | CX5g037280 | LOC_Os05g33270 | Os05g0401000 | - | Detail |
| C2H5g02233 | 5:16,444,064-16,445,342 | - | C1H5g03599 | CX5g037925 | LOC_Os05g33280 | Os05g0401100 | - | Detail |
| C2H5g05810 | 5:16,447,044-16,450,112 | - | C1H5g20391 | CX5g037189 | LOC_Os05g33290 | Os05g0401200 | - | Detail |
| C2H5g01039 | 5:16,451,669-16,454,855 | + | C1H5g07015 | CX5g037739 | LOC_Os05g33300 | Os05g0401300 | - | Detail |
| C2H5g30127 | 5:16,459,870-16,467,507 | - | C1H5g21820 | CX5g037619 | LOC_Os05g33310 | Os05g0401500 | OsALKBH10 | Detail |
| C2H5g11961 | 5:16,502,397-16,504,378 | - | C1H5g03038 | CX5g037920 | LOC_Os05g33360 | Os05g0402300 | - | Detail |
| C2H5g21496 | 5:16,520,610-16,522,707 | + | C1H5g27025 | CX5g039182 | LOC_Os05g33380 | Os05g0402700 | - | Detail |
| C2H5g25951 | 5:16,523,570-16,537,249 | - | C1H5g19618 | CX5g036855 | LOC_Os05g33390 | Os05g0402800 | OsPDR2 | Detail |
| C2H5g30164 | 5:16,548,987-16,550,300 | + | C1H5g25416 | CX5g038147 | LOC_Os05g33410 | Os05g0403000 | - | Detail |
| C2H5g12717 | 5:16,553,818-16,554,686 | + | C1H5g21075 | CX5g040383 | LOC_Os05g33400 | Os05g0402900 | - | Detail |
| C2H5g18668 | 5:16,558,772-16,560,027 | + | C1H5g08022 | CX5g040640 | - | Os05g0593000 | - | Detail |
| C2H5g01144 | 5:16,567,415-16,568,782 | + | C1H5g23859 | CX5g041059 | LOC_Os05g33430 | Os05g0403300 | - | Detail |
| C2H5g04560 | 5:16,586,516-16,588,969 | + | C1H5g02391 | CX5g039018 | LOC_Os05g33510 | Os05g0404200 | - | Detail |
| C2H5g10925 | 5:16,590,903-16,591,457 | - | C1H5g01796 | - | LOC_Os05g33514 | Os05g0404300 | - | Detail |
| C2H5g30675 | 5:16,591,936-16,594,263 | - | C1H5g29503 | CX5g038578 | LOC_Os05g33520 | Os05g0404400 | - | Detail |
| C2H5g08727 | 5:16,602,821-16,603,294 | - | C1H5g16117 | CX5g040559 | LOC_Os05g33550 | Os05g0404600 | - | Detail |
| C2H5g08228 | 5:16,605,651-16,606,803 | - | C1H5g14908 | CX5g040559 | LOC_Os05g33554 | Os05g0404700 | - | Detail |
| C2H5g25265 | 5:16,612,159-16,632,616 | - | C1H5g00960 | CX5g038938 | LOC_Os05g33570 | Os05g0405000 | OsPPDKB, cyOsPPDKB, cyOsPPDK, FLO4-4, FLO4 | Detail |
| C2H5g18538 | 5:16,636,306-16,636,662 | + | C1H5g24568 | - | LOC_Os05g33580 | Os05g0405400 | - | Detail |
| C2H5g01434 | 5:16,638,755-16,641,050 | - | C1H5g17267 | CX5g040594 | LOC_Os05g33590 | Os05g0405500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |