| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g09579 | 1:3,570,739-3,571,429 | - | C2H1g16567 | - | LOC_Os01g08300 | Os01g0178300 | CDT3, OsCDT3 | Detail |
| C1H1g19644 | 1:3,572,965-3,575,327 | - | C2H1g05074 | CX1g003276 | LOC_Os01g08310 | Os01g0178400 | - | Detail |
| C1H1g13257 | 1:3,579,920-3,580,611 | - | C2H1g22659 | CX1g006768 | LOC_Os01g08320 | Os01g0178500 | OsIAA1 | Detail |
| C1H1g10164 | 1:3,593,509-3,597,282 | + | C2H1g00169 | CX1g004954 | LOC_Os01g08340 | Os01g0178700 | - | Detail |
| C1H1g01382 | 1:3,601,294-3,601,593 | - | C2H1g20461 | - | - | - | - | Detail |
| C1H1g05955 | 1:3,605,504-3,606,817 | - | C2H1g02703 | CX1g004634 | LOC_Os01g08380 | Os01g0179000 | - | Detail |
| C1H1g30989 | 1:3,614,516-3,618,904 | + | C2H1g07957 | CX1g003878 | LOC_Os01g08400 | Os01g0179200 | - | Detail |
| C1H1g00147 | 1:3,620,328-3,624,234 | + | C2H1g06451 | CX1g001124 | - | - | - | Detail |
| C1H1g14891 | 1:3,625,320-3,627,818 | + | C2H1g13456 | CX1g001347 | LOC_Os01g08410 | Os01g0179300 | - | Detail |
| C1H1g01282 | 1:3,628,896-3,642,156 | + | C2H1g18435 | CX1g003881 | LOC_Os01g08420 | Os01g0179400 | SSG4 | Detail |
| C1H1g03761 | 1:3,644,239-3,651,711 | + | C2H1g10454 | CX1g000976 | LOC_Os01g08430 | Os01g0179500 | - | Detail |
| C1H1g18226 | 1:3,656,227-3,657,669 | - | C2H1g20314 | CX1g000280 | LOC_Os01g08440 | Os01g0179600 | - | Detail |
| C1H1g03506 | 1:3,663,306-3,677,262 | - | C2H1g29431 | CX1g000517 | LOC_Os01g08464 | Os01g0179700 | - | Detail |
| C1H1g12207 | 1:3,679,975-3,681,531 | - | C2H1g21560 | CX1g007079 | LOC_Os01g08470 | Os01g0180000 | - | Detail |
| C1H1g15413 | 1:3,695,289-3,700,112 | - | C2H1g01209 | CX1g004041 | LOC_Os01g08510 | Os01g0180300 | - | Detail |
| C1H1g03096 | 1:3,702,299-3,703,799 | - | C2H1g26851 | CX1g001675 | LOC_Os01g08520 | Os01g0180400 | - | Detail |
| C1H1g16576 | 1:3,718,337-3,719,292 | - | C2H1g11735 | - | - | Os01g0963300 | - | Detail |
| C1H1g30826 | 1:3,721,398-3,722,846 | - | C2H1g01950 | - | - | - | - | Detail |
| C1H1g26098 | 1:3,724,056-3,733,645 | - | C2H1g00248 | CX1g004464 | LOC_Os01g08540 | Os01g0180600 | OsMSH7 | Detail |
| C1H1g08568 | 1:3,737,083-3,741,342 | - | C2H1g21704 | CX1g000897 | LOC_Os01g08550 | Os01g0180700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H11g07958 | 11:2,753,730-2,754,542 | + | C1H11g01257 | CX11g011738 | LOC_Os11g06780 | Os11g0108800 | - | Detail |
| C2H11g12906 | 11:2,755,645-2,755,995 | + | C1H11g01257 | CX11g014975 | LOC_Os11g06780 | Os11g0168600 | OsRLCK311 | Detail |
| C2H11g06867 | 11:2,769,312-2,775,663 | + | C1H11g25541 | CX11g012040 | LOC_Os11g06810 | Os11g0169100 | - | Detail |
| C2H11g18204 | 11:2,779,464-2,781,421 | - | C1H11g31699 | CX11g012381 | LOC_Os11g06820 | Os11g0169200 | OsAUX5 | Detail |
| C2H11g02739 | 11:2,792,567-2,794,068 | + | C1H11g29597 | - | LOC_Os11g06840 | Os11g0169400 | - | Detail |
| C2H11g17011 | 11:2,794,520-2,794,768 | + | C1H11g29597 | - | LOC_Os11g06840 | Os11g0169400 | - | Detail |
| C2H11g17775 | 11:2,802,568-2,803,854 | - | C1H11g23066 | CX11g011604 | LOC_Os11g06860 | Os11g0169600 | - | Detail |
| C2H11g15019 | 11:2,804,121-2,805,845 | - | C1H11g21063 | CX11g014813 | LOC_Os11g06870 | Os11g0169700 | - | Detail |
| C2H11g25500 | 11:2,807,900-2,813,610 | + | C1H11g28306 | CX11g011307 | LOC_Os11g06880 | Os11g0169800 | - | Detail |
| C2H11g21238 | 11:2,814,122-2,816,080 | - | C1H11g24754 | CX11g012521 | LOC_Os11g06890 | Os11g0169900 | - | Detail |
| C2H11g01682 | 11:2,818,987-2,835,174 | - | C1H11g03754 | CX11g013642 | LOC_Os11g06910 | Os11g0170200 | - | Detail |
| C2H11g02083 | 11:2,842,450-2,847,861 | - | C1H11g19710 | CX11g012261 | LOC_Os11g06930 | Os11g0170300 | - | Detail |
| C2H11g14668 | 11:2,852,155-2,854,707 | - | C1H11g00486 | CX11g014717 | LOC_Os11g06990 | Os11g0171100 | - | Detail |
| C2H11g20177 | 11:2,876,127-2,878,964 | + | C1H11g02887 | CX11g010973 | LOC_Os11g07000 | Os11g0171100 | - | Detail |
| C2H11g20553 | 11:2,888,533-2,891,618 | - | C1H11g21973 | CX11g011009 | LOC_Os11g07020 | Os11g0171300 | - | Detail |
| C2H11g00926 | 11:2,893,288-2,894,751 | - | C1H11g09155 | CX11g012638 | LOC_Os11g07030 | Os11g0171400 | - | Detail |
| C2H11g09510 | 11:2,895,053-2,899,950 | - | C1H11g09618 | CX11g013844 | LOC_Os11g07040 | Os11g0171500 | CDPK24, OsCDPK14, OsCPK24 | Detail |
| C2H11g07786 | 11:2,907,554-2,913,457 | - | C1H11g05971 | CX11g011467 | LOC_Os11g07050 | Os11g0171700 | - | Detail |
| C2H11g16481 | 11:2,923,767-2,928,217 | + | C1H11g24257 | CX11g012659 | LOC_Os11g07060 | Os11g0171800 | - | Detail |
| C2H11g17291 | 11:2,933,592-2,935,190 | + | C1H11g07858 | CX11g014246 | LOC_Os11g07090 | Os11g0172100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |