| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H10g09798 | 10:12,388,740-12,393,921 | - | C2H10g05646 | CX10g009792 | LOC_Os10g26130 | Os10g0400800 | - | Detail |
| C1H10g17747 | 10:12,395,908-12,404,829 | + | C2H10g14652 | CX10g007582 | LOC_Os10g26140 | Os10g0400900 | - | Detail |
| C1H10g07798 | 10:12,410,142-12,414,331 | + | C2H10g03850 | CX10g008323 | LOC_Os10g26164 | Os10g0401100 | - | Detail |
| C1H10g12994 | 10:12,417,909-12,423,435 | - | C2H10g09742 | CX10g010682 | LOC_Os10g26280 | Os10g0402200 | ORC3, OsORC3 | Detail |
| C1H10g19566 | 10:12,430,656-12,434,073 | - | C2H10g26563 | CX10g007841 | LOC_Os10g26290 | Os10g0402400 | - | Detail |
| C1H10g09520 | 10:12,480,795-12,482,540 | - | C2H10g21713 | CX10g007319 | LOC_Os10g26340 | Os10g0403000 | PLA1, pla1, plt1, CYP78A11 | Detail |
| C1H10g29036 | 10:12,504,593-12,509,243 | + | C2H10g29616 | CX10g008675 | LOC_Os10g26390 | Os10g0403700 | - | Detail |
| C1H10g23860 | 10:12,518,398-12,518,771 | - | C2H10g19378 | CX10g010536 | LOC_Os10g26410 | Os10g0403800 | OsbHLH174 | Detail |
| C1H10g20492 | 10:12,541,746-12,548,765 | + | C2H10g14621 | CX10g010603 | LOC_Os10g26430 | Os09g0408300 | - | Detail |
| C1H10g22107 | 10:12,559,648-12,560,029 | + | C2H10g15527 | CX10g010293 | LOC_Os10g26460 | Os10g0404300 | OsbHLH173 | Detail |
| C1H10g29328 | 10:12,564,894-12,577,584 | + | C2H10g02076 | CX10g007588 | LOC_Os10g26470 | Os10g0404500 | OsSUT3 | Detail |
| C1H10g31230 | 10:12,578,464-12,578,652 | + | C2H10g30475 | - | LOC_Os10g26480 | - | - | Detail |
| C1H10g19702 | 10:12,590,004-12,591,839 | + | C2H10g25009 | CX10g009122 | LOC_Os10g26500 | Os10g0404900 | - | Detail |
| C1H10g31687 | 10:12,607,473-12,613,154 | + | C2H10g00267 | CX10g009203 | LOC_Os10g26520 | Os10g0405100 | - | Detail |
| C1H10g29879 | 10:12,615,462-12,617,892 | + | C2H10g29752 | CX10g010584 | LOC_Os10g26540 | Os10g0405300 | - | Detail |
| C1H10g05975 | 10:12,625,245-12,630,658 | + | C2H10g24843 | CX10g009344 | LOC_Os10g26560 | Os10g0405500 | PAIR3 | Detail |
| C1H10g05197 | 10:12,631,082-12,635,630 | - | C2H10g12168 | CX10g007362 | LOC_Os10g26570 | Os10g0405600 | - | Detail |
| C1H10g16312 | 10:12,646,160-12,647,562 | - | C2H10g03758 | CX10g009510 | LOC_Os10g26600 | Os10g0406100 | - | Detail |
| C1H10g17493 | 10:12,649,044-12,654,484 | - | C2H10g05652 | CX10g009711 | LOC_Os10g26610 | Os10g0406200 | - | Detail |
| C1H10g19589 | 10:12,663,464-12,665,640 | - | C2H10g25059 | CX10g010215 | LOC_Os10g26620 | Os10g0406300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g02560 | 9:11,384,327-11,384,862 | + | C1H9g07383 | CX9g056499 | LOC_Os09g21770 | Os09g0386500 | OsEBL2 | Detail |
| C2H9g07150 | 9:11,388,395-11,394,655 | - | C1H9g16738 | CX9g057590 | LOC_Os09g21780 | Os09g0386600 | - | Detail |
| C2H9g12396 | 9:11,409,338-11,413,360 | + | C1H9g23102 | CX9g056020 | LOC_Os09g22440 | Os09g0392000 | - | Detail |
| C2H9g04209 | 9:11,415,591-11,419,272 | + | C1H9g00211 | CX9g054898 | LOC_Os09g22450 | Os09g0392100 | OsEDS1 | Detail |
| C2H9g17686 | 9:11,427,394-11,435,712 | + | C1H9g02506 | - | LOC_Os09g22490 | Os12g0275400 | - | Detail |
| C2H9g01293 | 9:11,446,420-11,451,437 | + | C1H9g11219 | CX9g057799 | LOC_Os09g22540 | Os09g0393200 | OsJMJ718 | Detail |
| C2H9g12185 | 9:11,475,949-11,483,458 | - | C1H9g30997 | CX9g057399 | LOC_Os09g23070 | Os09g0394100 | - | Detail |
| C2H9g07203 | 9:11,476,461-11,476,850 | + | C1H9g16300 | CX9g057399 | - | Os09g0393801 | - | Detail |
| C2H9g23876 | 9:11,484,680-11,485,378 | - | C1H9g09905 | CX9g057598 | LOC_Os09g23084 | Os09g0394300 | - | Detail |
| C2H9g15186 | 9:11,489,350-11,493,198 | - | C1H9g09905 | CX9g057598 | LOC_Os09g23084 | Os09g0394300 | - | Detail |
| C2H9g25736 | 9:11,520,287-11,524,781 | + | C1H9g21012 | CX9g057002 | LOC_Os09g23110 | Os09g0394500 | OspGlcT3 | Detail |
| C2H9g21887 | 9:11,531,055-11,542,042 | - | C1H9g04354 | CX9g056382 | LOC_Os09g23140 | Os09g0394600 | - | Detail |
| C2H9g21753 | 9:11,542,772-11,543,296 | - | C1H9g06730 | - | - | - | - | Detail |
| C2H9g12341 | 9:11,548,144-11,553,160 | + | C1H9g07311 | CX9g056041 | LOC_Os09g23160 | Os09g0394900 | - | Detail |
| C2H9g20514 | 9:11,587,171-11,593,057 | - | - | CX9g055482 | LOC_Os09g23480 | - | - | Detail |
| C2H9g06605 | 9:11,607,761-11,613,512 | + | C1H9g00378 | CX9g057525 | LOC_Os09g23200 | Os09g0395300 | RL9, rl9, OsADD1 | Detail |
| C2H9g24566 | 9:11,621,383-11,621,697 | - | - | - | - | Os09g0395400 | - | Detail |
| C2H9g01641 | 9:11,629,631-11,631,037 | - | C1H9g06586 | CX9g056960 | LOC_Os09g23220 | Os09g0395600 | - | Detail |
| C2H9g28359 | 9:11,642,562-11,645,338 | + | C1H9g04135 | CX9g056289 | LOC_Os09g23280 | Os09g0396300 | - | Detail |
| C2H9g19158 | 9:11,671,993-11,673,781 | + | C1H9g25860 | CX9g055871 | LOC_Os09g23300 | Os09g0396900 | OsVIT2 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |