| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g31867 | 1:3,355,804-3,359,143 | + | C2H1g14488 | CX1g001175 | LOC_Os01g07950 | Os01g0174900 | - | Detail |
| C1H1g24398 | 1:3,359,730-3,363,725 | - | C2H1g22647 | CX1g003986 | LOC_Os01g07960 | Os01g0175000 | - | Detail |
| C1H1g18087 | 1:3,374,875-3,380,717 | - | C2H1g30617 | CX1g004096 | LOC_Os01g07980 | Os01g0175400 | - | Detail |
| C1H1g05589 | 1:3,384,746-3,389,181 | - | C2H1g23906 | CX1g001976 | LOC_Os01g08020 | Os01g0175600 | BOR2, OsBOR2, OsBOR3 | Detail |
| C1H1g28606 | 1:3,402,750-3,407,351 | - | C2H1g04507 | CX1g006212 | LOC_Os01g08020 | Os01g0175700 | BOR2, OsBOR2, OsBOR3 | Detail |
| C1H1g24276 | 1:3,417,629-3,419,654 | + | C2H1g10547 | CX1g006769 | LOC_Os01g08090 | Os01g0176000 | - | Detail |
| C1H1g30308 | 1:3,420,696-3,422,479 | + | C2H1g11095 | CX1g003023 | LOC_Os01g08100 | Os01g0176100 | - | Detail |
| C1H1g02538 | 1:3,423,536-3,425,537 | + | C2H1g17460 | CX1g005553 | LOC_Os01g08110 | Os01g0176200 | - | Detail |
| C1H1g22640 | 1:3,432,147-3,436,739 | + | C2H1g17877 | CX1g005143 | LOC_Os01g08130 | Os01g0176400 | - | Detail |
| C1H1g06103 | 1:3,436,955-3,440,221 | - | C2H1g05536 | CX1g005306 | LOC_Os01g08150 | Os01g0176500 | - | Detail |
| C1H1g20288 | 1:3,456,019-3,456,207 | + | C2H1g25065 | CX1g006352 | LOC_Os01g08160 | Os01g0176700 | - | Detail |
| C1H1g03923 | 1:3,456,277-3,457,890 | + | C2H1g25065 | CX1g006352 | LOC_Os01g08160 | Os01g0176700 | - | Detail |
| C1H1g31422 | 1:3,465,359-3,466,757 | - | C2H1g06706 | CX1g005369 | LOC_Os01g08180 | Os01g0176900 | - | Detail |
| C1H1g14865 | 1:3,476,824-3,485,228 | + | C2H1g26258 | CX1g004627 | LOC_Os01g08190 | Os01g0177100 | - | Detail |
| C1H1g25960 | 1:3,487,096-3,495,960 | + | C2H1g16195 | CX1g003518 | LOC_Os01g08200 | Os01g0177200 | - | Detail |
| C1H1g22558 | 1:3,504,929-3,506,165 | - | C2H1g03295 | CX1g003748 | LOC_Os01g08220 | Os01g0177400 | D18, d18-h (d18-I, d18h), dwf15, d25, d18, d18-k, d18-AD, d18-dy, OsGA3ox2, ga3ox2, OsGA3OX2, GA3OX2, GA3ox-2 | Detail |
| C1H1g04757 | 1:3,538,810-3,548,613 | - | C2H1g12398 | CX1g004229 | LOC_Os01g08260 | Os01g0177900 | - | Detail |
| C1H1g28750 | 1:3,557,094-3,562,085 | - | C2H1g19074 | CX1g004531 | LOC_Os01g08270 | Os01g0178000 | - | Detail |
| C1H1g30727 | 1:3,563,709-3,567,504 | + | C2H1g18970 | CX1g004172 | LOC_Os01g08280 | Os01g0178100 | - | Detail |
| C1H1g15139 | 1:3,568,178-3,570,121 | + | C2H1g21666 | CX1g001768 | LOC_Os01g08290 | Os01g0178200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g00675 | 2:23,782,069-23,785,718 | + | C1H2g30669 | CX2g021927 | LOC_Os02g42370 | Os02g0635600 | - | Detail |
| C2H2g19311 | 2:23,786,041-23,787,784 | + | C1H2g12016 | CX2g019106 | LOC_Os02g42374 | Os02g0635700 | - | Detail |
| C2H2g06973 | 2:23,791,846-23,792,478 | + | - | CX2g019266 | LOC_Os02g42380 | Os02g0635800 | OsTCP4 | Detail |
| C2H2g22990 | 2:23,797,201-23,798,472 | - | - | - | LOC_Os02g42390 | - | - | Detail |
| C2H2g23612 | 2:23,803,125-23,804,846 | - | C1H2g05908 | CX2g020718 | LOC_Os02g42406 | Os02g0636300 | - | Detail |
| C2H2g00476 | 2:23,808,988-23,811,728 | - | C1H2g22031 | CX2g020431 | LOC_Os02g42412 | Os02g0636400 | - | Detail |
| C2H2g02708 | 2:23,815,056-23,815,970 | - | C1H2g23578 | CX2g020765 | LOC_Os02g42430 | Os02g0636600 | - | Detail |
| C2H2g02768 | 2:23,819,945-23,820,946 | - | C1H2g27721 | CX2g021056 | LOC_Os02g42440 | Os02g0636700 | - | Detail |
| C2H2g16910 | 2:23,829,576-23,829,914 | + | - | CX2g021078 | LOC_Os02g42450 | Os02g0637000 | - | Detail |
| C2H2g18477 | 2:23,833,809-23,834,054 | - | - | CX2g021291 | LOC_Os02g42470 | Os02g0637200 | - | Detail |
| C2H2g00017 | 2:23,845,604-23,854,284 | - | C1H2g29685 | CX2g024584 | LOC_Os02g42520 | Os02g0637700 | - | Detail |
| C2H2g15791 | 2:23,857,466-23,859,556 | + | C1H2g26947 | CX2g019457 | LOC_Os02g42540 | Os02g0637900 | - | Detail |
| C2H2g08073 | 2:23,860,767-23,862,589 | - | C1H2g12864 | CX2g024820 | LOC_Os02g42550 | Os02g0638000 | - | Detail |
| C2H2g00762 | 2:23,864,348-23,866,269 | - | C1H2g12085 | CX2g018862 | LOC_Os02g42560 | Os02g0638200 | - | Detail |
| C2H2g23276 | 2:23,871,401-23,871,850 | - | - | CX2g024504 | LOC_Os02g42570 | Os02g0638300 | - | Detail |
| C2H2g24542 | 2:23,873,672-23,878,763 | - | C1H2g17781 | CX2g019050 | LOC_Os02g42580 | Os02g0638400 | - | Detail |
| C2H2g04927 | 2:23,897,761-23,903,717 | + | C1H2g19771 | CX2g019677 | LOC_Os02g42590 | Os02g0638900 | - | Detail |
| C2H2g27769 | 2:23,905,361-23,915,017 | + | C1H2g26703 | CX2g024937 | LOC_Os02g42600 | Os02g0639000 | LMS, OsLMS | Detail |
| C2H2g18798 | 2:23,918,196-23,919,949 | - | C1H2g01974 | CX2g019865 | LOC_Os02g42620 | Os02g0639100 | - | Detail |
| C2H2g17321 | 2:23,923,453-23,925,946 | - | C1H2g26991 | - | LOC_Os02g42630 | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |