| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H10g19606 | 10:9,040,597-9,045,203 | + | C2H10g15016 | CX10g009541 | LOC_Os10g18070 | Os10g0327800 | - | Detail |
| C1H10g21713 | 10:9,048,218-9,049,098 | + | C2H10g12852 | - | LOC_Os10g18070 | Os10g0327800 | - | Detail |
| C1H10g20865 | 10:9,088,003-9,090,138 | + | C2H10g22668 | CX10g010343 | LOC_Os10g18150 | Os10g0328700 | - | Detail |
| C1H10g01027 | 10:9,117,532-9,122,593 | + | C2H10g12968 | CX10g010697 | LOC_Os10g18220 | Os10g0329300 | - | Detail |
| C1H10g02244 | 10:9,132,331-9,134,338 | - | C2H10g19164 | CX10g010338 | LOC_Os10g18260 | Os10g0326900 | - | Detail |
| C1H10g22305 | 10:9,135,138-9,135,424 | - | C2H10g29781 | - | - | - | - | Detail |
| C1H10g29576 | 10:9,139,721-9,140,929 | - | C2H10g15917 | CX10g010430 | LOC_Os10g17960 | Os10g0329900 | - | Detail |
| C1H10g21627 | 10:9,191,535-9,192,692 | + | - | - | - | - | - | Detail |
| C1H10g10577 | 10:9,194,621-9,195,118 | + | C2H10g25098 | CX10g007275 | LOC_Os10g18340 | Os10g0330000 | - | Detail |
| C1H10g23030 | 10:9,217,914-9,218,473 | + | C2H10g04252 | - | LOC_Os10g18364 | Os10g0330300 | - | Detail |
| C1H10g23125 | 10:9,219,730-9,221,195 | + | C2H10g25168 | - | LOC_Os10g18364 | Os10g0330300 | - | Detail |
| C1H10g06660 | 10:9,223,595-9,224,591 | + | C2H10g19926 | CX10g007335 | LOC_Os10g18370 | Os10g0330400 | - | Detail |
| C1H10g21391 | 10:9,230,081-9,237,144 | + | C2H10g01382 | CX10g008206 | LOC_Os10g18400 | Os10g0330600 | - | Detail |
| C1H10g04404 | 10:9,244,270-9,244,449 | + | C2H10g01542 | CX10g010243 | LOC_Os10g18410 | Os10g0380100 | OsTHT2 | Detail |
| C1H10g07678 | 10:9,253,839-9,254,462 | + | C2H10g01542 | CX10g008306 | LOC_Os10g18410 | Os10g0380100 | OsTHT2 | Detail |
| C1H10g31545 | 10:9,254,558-9,255,085 | + | C2H10g01542 | CX10g008737 | LOC_Os10g18430 | Os10g0380100 | OsTHT2 | Detail |
| C1H10g06005 | 10:9,255,099-9,255,527 | + | C2H10g01542 | CX10g008737 | LOC_Os10g18430 | Os10g0380100 | OsTHT2 | Detail |
| C1H10g16945 | 10:9,269,438-9,269,992 | - | C2H10g18243 | CX10g007909 | LOC_Os10g18470 | Os10g0331400 | - | Detail |
| C1H10g01643 | 10:9,271,843-9,273,480 | - | C2H10g15108 | CX10g008629 | LOC_Os10g18480 | Os10g0331600 | - | Detail |
| C1H10g00726 | 10:9,275,154-9,275,726 | - | C2H10g15108 | CX10g008629 | LOC_Os10g18490 | Os10g0332000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g01980 | 3:28,769,869-28,772,490 | - | C1H3g09903 | CX3g026536 | LOC_Os03g55320 | Os03g0761100 | - | Detail |
| C2H3g06672 | 3:28,774,318-28,777,794 | - | C1H3g13690 | CX3g026537 | LOC_Os03g55330 | Os03g0761200 | - | Detail |
| C2H3g12099 | 3:28,793,894-28,798,830 | + | C1H3g30024 | CX3g028991 | LOC_Os03g55360 | Os03g0761700 | - | Detail |
| C2H3g13639 | 3:28,801,419-28,805,273 | + | C1H3g06743 | CX3g030441 | LOC_Os03g55380 | Os03g0761900 | - | Detail |
| C2H3g22708 | 3:28,807,938-28,813,613 | - | C1H3g04781 | CX3g027555 | LOC_Os03g55389 | Os03g0762000 | HD6, Hd6, Hd6(t)*, OsCKA2, OSCKA2 | Detail |
| C2H3g06124 | 3:28,815,348-28,816,132 | - | C1H3g13239 | CX3g029923 | LOC_Os03g55400 | Os03g0762100 | - | Detail |
| C2H3g03334 | 3:28,824,236-28,825,529 | + | C1H3g15054 | CX3g027273 | LOC_Os03g55410 | Os03g0762300 | - | Detail |
| C2H3g28441 | 3:28,829,093-28,831,783 | + | C1H3g30848 | CX3g028085 | LOC_Os03g55420 | Os03g0762400 | - | Detail |
| C2H3g23566 | 3:28,836,777-28,837,357 | + | C1H3g21651 | CX3g025152 | LOC_Os07g02460 | Os03g0206400 | - | Detail |
| C2H3g15621 | 3:28,837,367-28,837,765 | + | - | - | LOC_Os03g55430 | Os03g0762500 | - | Detail |
| C2H3g21236 | 3:28,841,343-28,843,221 | - | C1H3g30412 | CX3g028267 | LOC_Os03g55450 | Os03g0762700 | - | Detail |
| C2H3g28904 | 3:28,851,569-28,855,786 | + | C1H3g31602 | CX3g027974 | LOC_Os03g55470 | Os03g0762900 | - | Detail |
| C2H3g20218 | 3:28,861,702-28,866,046 | + | C1H3g12054 | CX3g028419 | LOC_Os03g55490 | Os03g0763000 | - | Detail |
| C2H3g15832 | 3:28,890,305-28,892,884 | + | C1H3g10528 | CX3g027285 | LOC_Os03g55530 | Os03g0764000 | GSE3 | Detail |
| C2H3g26472 | 3:28,905,764-28,912,939 | - | C1H3g07992 | CX3g027062 | LOC_Os03g55560 | Os03g0764300 | OstMAPKKK5 | Detail |
| C2H3g25717 | 3:28,919,148-28,926,059 | + | C1H3g08783 | CX3g027539 | LOC_Os03g55570 | Os03g0764550 | - | Detail |
| C2H3g13812 | 3:28,935,297-28,937,445 | + | C1H3g17565 | CX3g029766 | LOC_Os03g55590 | Os03g0764600 | OsHHO3 | Detail |
| C2H3g16680 | 3:28,942,582-28,947,621 | + | C1H3g10682 | CX3g030582 | LOC_Os03g55600 | Os03g0764800 | SAPK8, OsSAPK8 | Detail |
| C2H3g01981 | 3:28,965,418-28,968,051 | + | C1H3g29826 | CX3g027424 | LOC_Os03g55620 | Os03g0765000 | - | Detail |
| C2H3g10671 | 3:28,969,609-28,972,477 | + | C1H3g07713 | CX3g029687 | LOC_Os03g55630 | Os03g0765100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |