| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g10155 | 1:3,235,752-3,239,909 | - | C2H1g23784 | CX1g001907 | LOC_Os01g07700 | Os01g0171800 | - | Detail |
| C1H1g26958 | 1:3,243,405-3,246,785 | + | C2H1g20738 | CX1g002415 | LOC_Os01g07710 | - | - | Detail |
| C1H1g20095 | 1:3,246,360-3,250,029 | - | C2H1g20386 | CX1g006763 | LOC_Os01g07720 | Os01g0172000 | - | Detail |
| C1H1g10981 | 1:3,252,323-3,254,633 | + | C2H1g03942 | CX1g003588 | LOC_Os01g07730 | Os01g0172100 | - | Detail |
| C1H1g04902 | 1:3,254,723-3,259,499 | - | C2H1g18220 | CX1g004788 | LOC_Os01g07740 | Os01g0172200 | OsDB10 | Detail |
| C1H1g23634 | 1:3,260,816-3,263,868 | - | C2H1g18869 | CX1g001295 | LOC_Os01g07750 | Os01g0172300 | - | Detail |
| C1H1g21846 | 1:3,264,902-3,269,142 | - | C2H1g28778 | CX1g001900 | LOC_Os01g07760 | Os01g0172400 | - | Detail |
| C1H1g19012 | 1:3,271,684-3,273,520 | + | C2H1g21544 | CX1g005114 | LOC_Os01g07770 | Os01g0172600 | - | Detail |
| C1H1g10453 | 1:3,275,994-3,276,566 | + | C2H1g20728 | CX1g002646 | LOC_Os01g07780 | Os01g0172800 | - | Detail |
| C1H1g07102 | 1:3,277,768-3,280,638 | + | C2H1g22521 | CX1g000708 | LOC_Os01g07790 | Os01g0172900 | - | Detail |
| C1H1g22748 | 1:3,280,796-3,282,208 | - | C2H1g05856 | CX1g005561 | LOC_Os01g07800 | Os01g0173000 | - | Detail |
| C1H1g06548 | 1:3,282,970-3,284,387 | - | C2H1g12136 | CX1g002508 | LOC_Os01g07810 | Os01g0173100 | - | Detail |
| C1H1g18797 | 1:3,296,955-3,298,669 | + | C2H1g26590 | CX1g005870 | LOC_Os01g07850 | Os01g0173600 | - | Detail |
| C1H1g19078 | 1:3,315,371-3,321,084 | + | C2H1g11564 | CX1g003910 | LOC_Os01g07870 | Os01g0173900 | - | Detail |
| C1H1g28967 | 1:3,322,095-3,322,924 | - | C2H1g09395 | CX1g004606 | LOC_Os01g07880 | Os01g0174000 | OsHY5L3, OsbZIP01, OsRE1 | Detail |
| C1H1g00770 | 1:3,323,021-3,323,475 | - | - | - | - | - | - | Detail |
| C1H1g06431 | 1:3,332,283-3,336,538 | - | C2H1g12786 | CX1g006673 | LOC_Os01g07910 | Os01g0174300 | - | Detail |
| C1H1g24697 | 1:3,339,300-3,341,987 | - | C2H1g18737 | CX1g002809 | LOC_Os01g07920 | Os01g0174500 | - | Detail |
| C1H1g15491 | 1:3,342,384-3,343,373 | - | C2H1g16794 | CX1g002809 | LOC_Os01g07930 | Os01g0174600 | - | Detail |
| C1H1g13210 | 1:3,347,432-3,354,686 | - | C2H1g29949 | CX1g001687 | LOC_Os01g07940 | Os01g0174700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g19014 | 6:4,177,335-4,177,637 | + | C1H6g27456 | CX6g045350 | LOC_Os06g09980 | Os06g0200800 | - | Detail |
| C2H6g30251 | 6:4,188,213-4,188,965 | + | - | CX6g041926 | LOC_Os06g10000 | Os06g0201000 | - | Detail |
| C2H6g28087 | 6:4,192,031-4,192,375 | + | - | CX6g041926 | LOC_Os06g10020 | Os06g0201200 | - | Detail |
| C2H6g00676 | 6:4,220,895-4,221,251 | + | - | CX6g041926 | LOC_Os06g10050 | Os06g0201500 | - | Detail |
| C2H6g10419 | 6:4,236,087-4,236,659 | + | - | - | LOC_Os06g10130 | Os06g0202400 | - | Detail |
| C2H6g22730 | 6:4,240,446-4,241,066 | + | - | - | LOC_Os06g10130 | Os06g0202700 | - | Detail |
| C2H6g24232 | 6:4,249,488-4,250,102 | + | - | - | LOC_Os06g10130 | Os06g0202700 | - | Detail |
| C2H6g25827 | 6:4,254,950-4,260,333 | - | C1H6g18699 | CX6g041684 | LOC_Os06g10140 | Os06g0202800 | - | Detail |
| C2H6g06745 | 6:4,267,752-4,270,062 | - | C1H6g01668 | CX6g041964 | LOC_Os06g10160 | Os06g0202900 | - | Detail |
| C2H6g20191 | 6:4,280,203-4,283,327 | - | C1H6g14872 | CX6g042526 | LOC_Os06g10170 | Os06g0203200 | - | Detail |
| C2H6g15507 | 6:4,285,194-4,285,472 | - | C1H6g22279 | CX6g042526 | LOC_Os06g10180 | Os06g0203400 | - | Detail |
| C2H6g21539 | 6:4,294,862-4,295,352 | - | C1H6g31654 | CX6g042526 | LOC_Os06g10170 | Os06g0203200 | - | Detail |
| C2H6g05276 | 6:4,297,945-4,300,045 | + | C1H6g17434 | CX6g045858 | LOC_Os06g10200 | Os06g0203500 | - | Detail |
| C2H6g16670 | 6:4,303,163-4,307,474 | + | C1H6g11138 | CX6g043354 | LOC_Os06g10210 | Os06g0203600 | - | Detail |
| C2H6g21576 | 6:4,313,691-4,315,368 | + | C1H6g09468 | CX6g043491 | LOC_Os06g10220 | Os06g0203700 | - | Detail |
| C2H6g06921 | 6:4,319,576-4,322,887 | - | - | CX6g041168 | - | - | - | Detail |
| C2H6g14981 | 6:4,324,499-4,332,169 | - | C1H6g11937 | CX6g042883 | LOC_Os06g10230 | Os06g0203800 | RLCK204, OsRLCK204, OsER1, ER1 | Detail |
| C2H6g00130 | 6:4,353,608-4,361,698 | - | C1H6g23580 | CX6g041307 | LOC_Os06g10280 | Os06g0204400 | - | Detail |
| C2H6g10123 | 6:4,363,285-4,369,208 | + | C1H6g12078 | CX6g043049 | LOC_Os06g10290 | Os06g0204600 | - | Detail |
| C2H6g24891 | 6:4,370,900-4,373,089 | + | C1H6g15426 | CX6g042955 | LOC_Os06g10300 | Os06g0204600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |