| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g10155 | 1:3,235,752-3,239,909 | - | C2H1g23784 | CX1g001907 | LOC_Os01g07700 | Os01g0171800 | - | Detail |
| C1H1g26958 | 1:3,243,405-3,246,785 | + | C2H1g20738 | CX1g002415 | LOC_Os01g07710 | - | - | Detail |
| C1H1g20095 | 1:3,246,360-3,250,029 | - | C2H1g20386 | CX1g006763 | LOC_Os01g07720 | Os01g0172000 | - | Detail |
| C1H1g10981 | 1:3,252,323-3,254,633 | + | C2H1g03942 | CX1g003588 | LOC_Os01g07730 | Os01g0172100 | - | Detail |
| C1H1g04902 | 1:3,254,723-3,259,499 | - | C2H1g18220 | CX1g004788 | LOC_Os01g07740 | Os01g0172200 | OsDB10 | Detail |
| C1H1g23634 | 1:3,260,816-3,263,868 | - | C2H1g18869 | CX1g001295 | LOC_Os01g07750 | Os01g0172300 | - | Detail |
| C1H1g21846 | 1:3,264,902-3,269,142 | - | C2H1g28778 | CX1g001900 | LOC_Os01g07760 | Os01g0172400 | - | Detail |
| C1H1g19012 | 1:3,271,684-3,273,520 | + | C2H1g21544 | CX1g005114 | LOC_Os01g07770 | Os01g0172600 | - | Detail |
| C1H1g10453 | 1:3,275,994-3,276,566 | + | C2H1g20728 | CX1g002646 | LOC_Os01g07780 | Os01g0172800 | - | Detail |
| C1H1g07102 | 1:3,277,768-3,280,638 | + | C2H1g22521 | CX1g000708 | LOC_Os01g07790 | Os01g0172900 | - | Detail |
| C1H1g22748 | 1:3,280,796-3,282,208 | - | C2H1g05856 | CX1g005561 | LOC_Os01g07800 | Os01g0173000 | - | Detail |
| C1H1g06548 | 1:3,282,970-3,284,387 | - | C2H1g12136 | CX1g002508 | LOC_Os01g07810 | Os01g0173100 | - | Detail |
| C1H1g18797 | 1:3,296,955-3,298,669 | + | C2H1g26590 | CX1g005870 | LOC_Os01g07850 | Os01g0173600 | - | Detail |
| C1H1g19078 | 1:3,315,371-3,321,084 | + | C2H1g11564 | CX1g003910 | LOC_Os01g07870 | Os01g0173900 | - | Detail |
| C1H1g28967 | 1:3,322,095-3,322,924 | - | C2H1g09395 | CX1g004606 | LOC_Os01g07880 | Os01g0174000 | OsHY5L3, OsbZIP01, OsRE1 | Detail |
| C1H1g00770 | 1:3,323,021-3,323,475 | - | - | - | - | - | - | Detail |
| C1H1g06431 | 1:3,332,283-3,336,538 | - | C2H1g12786 | CX1g006673 | LOC_Os01g07910 | Os01g0174300 | - | Detail |
| C1H1g24697 | 1:3,339,300-3,341,987 | - | C2H1g18737 | CX1g002809 | LOC_Os01g07920 | Os01g0174500 | - | Detail |
| C1H1g15491 | 1:3,342,384-3,343,373 | - | C2H1g16794 | CX1g002809 | LOC_Os01g07930 | Os01g0174600 | - | Detail |
| C1H1g13210 | 1:3,347,432-3,354,686 | - | C2H1g29949 | CX1g001687 | LOC_Os01g07940 | Os01g0174700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g10074 | 6:882,368-884,588 | + | C1H6g26374 | CX6g044771 | LOC_Os06g03640 | Os06g0126500 | OsBAG3 | Detail |
| C2H6g16457 | 6:890,570-893,191 | + | C1H6g08039 | CX6g044567 | LOC_Os06g03660 | Os06g0127000 | PEX11-5, OsPEX11-5 | Detail |
| C2H6g24498 | 6:898,287-898,949 | + | C1H6g24795 | CX6g043830 | LOC_Os06g03670 | Os06g0127100 | OsDREB1C | Detail |
| C2H6g22226 | 6:901,330-907,859 | - | C1H6g30204 | CX6g042948 | LOC_Os06g03676 | Os06g0127200 | - | Detail |
| C2H6g14783 | 6:908,304-911,441 | - | C1H6g11151 | CX6g043338 | LOC_Os06g03682 | Os06g0127300 | - | Detail |
| C2H6g06854 | 6:915,175-919,045 | + | - | - | - | - | - | Detail |
| C2H6g25721 | 6:919,420-920,318 | + | - | - | - | - | - | Detail |
| C2H6g24069 | 6:921,289-923,778 | + | C1H6g14007 | CX6g045340 | LOC_Os06g03690 | Os06g0127500 | - | Detail |
| C2H6g20245 | 6:924,782-927,881 | - | C1H6g10479 | - | - | - | - | Detail |
| C2H6g30624 | 6:928,559-933,136 | + | C1H6g17810 | CX6g041519 | LOC_Os06g03700 | Os06g0127700 | - | Detail |
| C2H6g08491 | 6:936,389-938,242 | - | - | CX6g045799 | LOC_Os06g03710 | Os06g0127800 | DLT, dlt, OsGRAS32, OsDLT | Detail |
| C2H6g12082 | 6:941,325-942,461 | + | - | CX6g041393 | LOC_Os06g03720 | Os06g0127900 | RNRS2 | Detail |
| C2H6g28052 | 6:943,879-946,853 | - | C1H2g01179 | - | - | - | - | Detail |
| C2H6g18696 | 6:947,730-948,691 | + | C1H6g24899 | CX6g045479 | LOC_Os06g03740 | Os06g0128000 | - | Detail |
| C2H6g15477 | 6:950,325-955,142 | + | C1H6g20127 | CX6g044568 | LOC_Os06g03750 | Os06g0128100 | - | Detail |
| C2H6g13317 | 6:955,898-960,375 | - | C1H6g31210 | CX6g041448 | LOC_Os06g03760 | Os06g0128200 | - | Detail |
| C2H6g29378 | 6:964,078-972,923 | - | C1H6g28537 | CX6g043010 | LOC_Os06g03770 | Os06g0128300 | - | Detail |
| C2H6g10322 | 6:974,718-982,113 | + | C1H6g12756 | CX6g042444 | LOC_Os06g03780 | Os06g0128400 | - | Detail |
| C2H6g19956 | 6:982,947-983,348 | + | C1H6g04394 | - | LOC_Os06g03790 | Os06g0128500 | - | Detail |
| C2H6g09883 | 6:984,734-986,073 | + | C1H6g04394 | - | LOC_Os06g03790 | Os06g0128500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |