| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g20548 | 1:3,022,473-3,028,076 | + | C2H1g07482 | CX1g007194 | LOC_Os01g07390 | Os01g0168400 | - | Detail |
| C1H1g22190 | 1:3,024,147-3,025,227 | - | - | - | - | Os01g0168450 | - | Detail |
| C1H1g12621 | 1:3,029,428-3,033,827 | + | C2H1g01297 | CX1g006740 | LOC_Os01g07400 | Os01g0168500 | - | Detail |
| C1H1g18695 | 1:3,035,447-3,038,529 | + | C2H1g01134 | CX1g006052 | LOC_Os01g07410 | Os01g0168600 | - | Detail |
| C1H1g22702 | 1:3,040,563-3,043,094 | - | C2H1g21723 | CX1g002240 | LOC_Os01g07420 | Os01g0168800 | - | Detail |
| C1H1g15062 | 1:3,083,605-3,098,571 | - | C2H1g17287 | CX1g003594 | LOC_Os01g07490 | Os01g0169500 | - | Detail |
| C1H1g17469 | 1:3,099,635-3,104,822 | - | C2H1g13966 | CX1g003939 | LOC_Os01g07500 | Os01g0169800 | FIB, fib | Detail |
| C1H1g12059 | 1:3,111,762-3,118,500 | - | C2H1g25779 | CX1g001588 | LOC_Os01g16050 | Os01g0531200 | - | Detail |
| C1H1g11658 | 1:3,121,278-3,122,104 | - | C2H1g15485 | - | - | - | - | Detail |
| C1H1g17887 | 1:3,124,541-3,128,393 | - | C2H1g18505 | CX1g002044 | LOC_Os01g07520 | Os01g0169900 | - | Detail |
| C1H1g06478 | 1:3,129,753-3,133,420 | - | C2H1g07559 | CX1g001973 | LOC_Os01g07530 | Os01g0170000 | - | Detail |
| C1H1g14550 | 1:3,142,370-3,145,897 | + | C2H1g19408 | CX1g006120 | LOC_Os01g07540 | Os01g0170100 | - | Detail |
| C1H1g09374 | 1:3,152,701-3,156,830 | + | C2H1g12386 | CX1g002596 | LOC_Os01g07560 | Os01g0170300 | - | Detail |
| C1H1g15607 | 1:3,161,356-3,167,284 | - | C2H1g26052 | CX1g002169 | LOC_Os01g07570 | Os01g0170500 | - | Detail |
| C1H1g29516 | 1:3,173,005-3,175,970 | + | C2H1g23567 | CX1g005563 | LOC_Os01g07590 | Os01g0170600 | - | Detail |
| C1H1g03810 | 1:3,176,761-3,177,827 | + | C2H1g19388 | CX1g006498 | LOC_Os01g07590 | Os01g0849600 | - | Detail |
| C1H1g30649 | 1:3,179,502-3,182,869 | + | C2H1g10083 | CX1g001258 | LOC_Os01g07600 | Os01g0170700 | - | Detail |
| C1H1g30232 | 1:3,196,412-3,196,759 | - | C2H1g06196 | CX1g005520 | LOC_Os01g07620 | Os01g0170900 | - | Detail |
| C1H1g10821 | 1:3,198,913-3,204,645 | - | C2H1g29680 | CX1g000199 | LOC_Os01g07630 | Os01g0171000 | - | Detail |
| C1H1g27422 | 1:3,209,863-3,217,430 | - | C2H1g04571 | CX1g001021 | LOC_Os01g07640 | Os01g0171100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g09287 | 3:30,222,920-30,226,256 | + | C1H3g31065 | CX3g027455 | LOC_Os03g58070 | Os03g0794900 | - | Detail |
| C2H3g10350 | 3:30,226,916-30,232,292 | - | C1H3g14917 | CX3g025789 | LOC_Os03g58080 | Os03g0795000 | - | Detail |
| C2H3g14214 | 3:30,233,192-30,235,132 | - | C1H3g21726 | CX7g047050 | LOC_Os03g58090 | Os03g0795100 | - | Detail |
| C2H3g03262 | 3:30,245,918-30,247,592 | - | C1H3g19476 | CX3g026410 | LOC_Os03g58110 | Os03g0795300 | - | Detail |
| C2H3g27733 | 3:30,259,067-30,262,461 | + | C1H3g15891 | CX3g026673 | LOC_Os03g58130 | Os03g0795500 | - | Detail |
| C2H3g00892 | 3:30,262,622-30,262,816 | - | C1H3g05639 | CX3g029982 | LOC_Os03g58140 | Os03g0795600 | - | Detail |
| C2H3g03004 | 3:30,263,080-30,264,677 | - | C1H3g08848 | CX3g029982 | LOC_Os03g58140 | Os03g0795600 | - | Detail |
| C2H3g02014 | 3:30,266,840-30,269,177 | - | C1H3g16443 | CX3g025433 | LOC_Os03g58150 | Os03g0795800 | - | Detail |
| C2H3g19484 | 3:30,269,440-30,272,649 | + | C1H3g00668 | CX3g029604 | LOC_Os03g58160 | Os03g0795900 | HSFA2E, HSfA2e, OsHsfA2e, OsHsf-12, HSF12 | Detail |
| C2H3g13882 | 3:30,280,144-30,280,849 | + | C1H3g17982 | - | - | Os03g0796000 | - | Detail |
| C2H3g08936 | 3:30,283,988-30,285,708 | + | C1H3g06155 | CX3g029140 | LOC_Os03g58170 | Os03g0744600 | - | Detail |
| C2H3g19170 | 3:30,304,548-30,305,166 | - | C1H3g22799 | CX3g029920 | LOC_Os03g58180 | Os03g0796301 | - | Detail |
| C2H3g21611 | 3:30,305,852-30,307,169 | - | C1H3g12446 | CX3g028585 | LOC_Os03g58190 | Os03g0796400 | - | Detail |
| C2H3g18356 | 3:30,310,527-30,312,904 | - | C1H3g01827 | CX3g026109 | LOC_Os03g58204 | Os03g0796501 | - | Detail |
| C2H3g26421 | 3:30,322,906-30,323,582 | - | - | CX7g047542 | - | - | - | Detail |
| C2H3g24067 | 3:30,325,529-30,328,397 | + | C1H3g31311 | CX3g026507 | - | - | - | Detail |
| C2H3g06838 | 3:30,342,946-30,345,210 | + | C1H3g10470 | CX3g027699 | LOC_Os03g58230 | Os03g0796600 | OsDUF50605 | Detail |
| C2H3g07985 | 3:30,356,260-30,362,517 | + | C1H3g27596 | CX3g028795 | LOC_Os03g58240 | Os03g0796800 | - | Detail |
| C2H3g15466 | 3:30,362,875-30,367,218 | - | C1H3g15009 | CX3g028970 | LOC_Os03g58250 | Os03g0796900 | REB, OsZIP33, RISBZ2, OsbZIP33 | Detail |
| C2H3g10564 | 3:30,370,146-30,373,999 | - | C1H3g17969 | CX3g025677 | LOC_Os03g58260 | Os03g0797000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |