| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g20548 | 1:3,022,473-3,028,076 | + | C2H1g07482 | CX1g007194 | LOC_Os01g07390 | Os01g0168400 | - | Detail |
| C1H1g22190 | 1:3,024,147-3,025,227 | - | - | - | - | Os01g0168450 | - | Detail |
| C1H1g12621 | 1:3,029,428-3,033,827 | + | C2H1g01297 | CX1g006740 | LOC_Os01g07400 | Os01g0168500 | - | Detail |
| C1H1g18695 | 1:3,035,447-3,038,529 | + | C2H1g01134 | CX1g006052 | LOC_Os01g07410 | Os01g0168600 | - | Detail |
| C1H1g22702 | 1:3,040,563-3,043,094 | - | C2H1g21723 | CX1g002240 | LOC_Os01g07420 | Os01g0168800 | - | Detail |
| C1H1g15062 | 1:3,083,605-3,098,571 | - | C2H1g17287 | CX1g003594 | LOC_Os01g07490 | Os01g0169500 | - | Detail |
| C1H1g17469 | 1:3,099,635-3,104,822 | - | C2H1g13966 | CX1g003939 | LOC_Os01g07500 | Os01g0169800 | FIB, fib | Detail |
| C1H1g12059 | 1:3,111,762-3,118,500 | - | C2H1g25779 | CX1g001588 | LOC_Os01g16050 | Os01g0531200 | - | Detail |
| C1H1g11658 | 1:3,121,278-3,122,104 | - | C2H1g15485 | - | - | - | - | Detail |
| C1H1g17887 | 1:3,124,541-3,128,393 | - | C2H1g18505 | CX1g002044 | LOC_Os01g07520 | Os01g0169900 | - | Detail |
| C1H1g06478 | 1:3,129,753-3,133,420 | - | C2H1g07559 | CX1g001973 | LOC_Os01g07530 | Os01g0170000 | - | Detail |
| C1H1g14550 | 1:3,142,370-3,145,897 | + | C2H1g19408 | CX1g006120 | LOC_Os01g07540 | Os01g0170100 | - | Detail |
| C1H1g09374 | 1:3,152,701-3,156,830 | + | C2H1g12386 | CX1g002596 | LOC_Os01g07560 | Os01g0170300 | - | Detail |
| C1H1g15607 | 1:3,161,356-3,167,284 | - | C2H1g26052 | CX1g002169 | LOC_Os01g07570 | Os01g0170500 | - | Detail |
| C1H1g29516 | 1:3,173,005-3,175,970 | + | C2H1g23567 | CX1g005563 | LOC_Os01g07590 | Os01g0170600 | - | Detail |
| C1H1g03810 | 1:3,176,761-3,177,827 | + | C2H1g19388 | CX1g006498 | LOC_Os01g07590 | Os01g0849600 | - | Detail |
| C1H1g30649 | 1:3,179,502-3,182,869 | + | C2H1g10083 | CX1g001258 | LOC_Os01g07600 | Os01g0170700 | - | Detail |
| C1H1g30232 | 1:3,196,412-3,196,759 | - | C2H1g06196 | CX1g005520 | LOC_Os01g07620 | Os01g0170900 | - | Detail |
| C1H1g10821 | 1:3,198,913-3,204,645 | - | C2H1g29680 | CX1g000199 | LOC_Os01g07630 | Os01g0171000 | - | Detail |
| C1H1g27422 | 1:3,209,863-3,217,430 | - | C2H1g04571 | CX1g001021 | LOC_Os01g07640 | Os01g0171100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g27162 | 9:19,021,887-19,023,725 | - | C1H9g18815 | CX9g057033 | LOC_Os09g38920 | Os09g0497500 | - | Detail |
| C2H9g03456 | 9:19,024,895-19,026,937 | - | C1H9g04134 | CX9g057411 | LOC_Os09g38930 | Os09g0562750 | - | Detail |
| C2H9g09986 | 9:19,040,180-19,040,616 | + | C1H9g07046 | CX9g055362 | LOC_Os09g38670 | Os09g0559600 | - | Detail |
| C2H9g06709 | 9:19,042,621-19,048,413 | - | C1H9g06523 | CX9g055046 | LOC_Os09g38960 | Os09g0563200 | OsHAK18 | Detail |
| C2H9g01538 | 9:19,051,561-19,057,154 | + | C1H9g19754 | CX9g057500 | LOC_Os09g38970 | Os09g0563250 | - | Detail |
| C2H9g16021 | 9:19,057,688-19,061,764 | + | C1H9g21219 | CX9g054934 | LOC_Os09g38980 | Os09g0563300 | TCD9, OsCPn60alpha3, OsCPn60α3 | Detail |
| C2H9g21433 | 9:19,071,960-19,074,845 | + | C1H9g01697 | CX9g056918 | LOC_Os09g39020 | Os09g0563700 | - | Detail |
| C2H9g26806 | 9:19,076,762-19,086,439 | - | C1H9g21274 | CX9g057338 | LOC_Os09g39034 | Os09g0563800 | - | Detail |
| C2H9g27013 | 9:19,092,614-19,094,426 | - | C1H9g07375 | CX9g058103 | LOC_Os09g39060 | Os09g0564000 | - | Detail |
| C2H9g21279 | 9:19,098,085-19,100,923 | - | C1H9g22045 | CX9g058103 | LOC_Os09g39070 | Os09g0564200 | - | Detail |
| C2H9g23865 | 9:19,108,617-19,110,153 | - | C1H9g22045 | CX9g058103 | LOC_Os09g39090 | Os09g0564400 | - | Detail |
| C2H9g13270 | 9:19,121,816-19,124,616 | - | C1H9g22045 | CX9g058103 | LOC_Os09g39110 | Os09g0564600 | - | Detail |
| C2H9g00317 | 9:19,126,925-19,128,682 | - | C1H9g27358 | CX9g058103 | LOC_Os09g39120 | Os09g0564700 | - | Detail |
| C2H9g01274 | 9:19,137,269-19,139,208 | - | C1H9g06269 | CX9g058103 | LOC_Os09g39160 | Os09g0565000 | - | Detail |
| C2H9g29707 | 9:19,176,003-19,178,915 | + | C1H9g06269 | CX9g058103 | LOC_Os09g39160 | Os09g0565000 | - | Detail |
| C2H9g17980 | 9:19,186,630-19,189,149 | - | C1H9g03665 | CX9g055784 | LOC_Os09g39180 | Os09g0565200 | OsCRP1 | Detail |
| C2H9g06735 | 9:19,189,868-19,191,873 | - | C1H9g23294 | CX9g055878 | LOC_Os09g39190 | Os09g0565300 | - | Detail |
| C2H9g05243 | 9:19,193,569-19,195,287 | - | C1H9g02800 | CX9g055878 | LOC_Os09g39190 | Os09g0565350 | - | Detail |
| C2H9g29461 | 9:19,195,507-19,199,219 | - | C1H9g15519 | CX9g056354 | LOC_Os09g39200 | Os09g0565400 | - | Detail |
| C2H9g27919 | 9:19,201,190-19,217,268 | + | C1H9g26476 | CX9g057714 | - | Os09g0565500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |