| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g20548 | 1:3,022,473-3,028,076 | + | C2H1g07482 | CX1g007194 | LOC_Os01g07390 | Os01g0168400 | - | Detail |
| C1H1g22190 | 1:3,024,147-3,025,227 | - | - | - | - | Os01g0168450 | - | Detail |
| C1H1g12621 | 1:3,029,428-3,033,827 | + | C2H1g01297 | CX1g006740 | LOC_Os01g07400 | Os01g0168500 | - | Detail |
| C1H1g18695 | 1:3,035,447-3,038,529 | + | C2H1g01134 | CX1g006052 | LOC_Os01g07410 | Os01g0168600 | - | Detail |
| C1H1g22702 | 1:3,040,563-3,043,094 | - | C2H1g21723 | CX1g002240 | LOC_Os01g07420 | Os01g0168800 | - | Detail |
| C1H1g15062 | 1:3,083,605-3,098,571 | - | C2H1g17287 | CX1g003594 | LOC_Os01g07490 | Os01g0169500 | - | Detail |
| C1H1g17469 | 1:3,099,635-3,104,822 | - | C2H1g13966 | CX1g003939 | LOC_Os01g07500 | Os01g0169800 | FIB, fib | Detail |
| C1H1g12059 | 1:3,111,762-3,118,500 | - | C2H1g25779 | CX1g001588 | LOC_Os01g16050 | Os01g0531200 | - | Detail |
| C1H1g11658 | 1:3,121,278-3,122,104 | - | C2H1g15485 | - | - | - | - | Detail |
| C1H1g17887 | 1:3,124,541-3,128,393 | - | C2H1g18505 | CX1g002044 | LOC_Os01g07520 | Os01g0169900 | - | Detail |
| C1H1g06478 | 1:3,129,753-3,133,420 | - | C2H1g07559 | CX1g001973 | LOC_Os01g07530 | Os01g0170000 | - | Detail |
| C1H1g14550 | 1:3,142,370-3,145,897 | + | C2H1g19408 | CX1g006120 | LOC_Os01g07540 | Os01g0170100 | - | Detail |
| C1H1g09374 | 1:3,152,701-3,156,830 | + | C2H1g12386 | CX1g002596 | LOC_Os01g07560 | Os01g0170300 | - | Detail |
| C1H1g15607 | 1:3,161,356-3,167,284 | - | C2H1g26052 | CX1g002169 | LOC_Os01g07570 | Os01g0170500 | - | Detail |
| C1H1g29516 | 1:3,173,005-3,175,970 | + | C2H1g23567 | CX1g005563 | LOC_Os01g07590 | Os01g0170600 | - | Detail |
| C1H1g03810 | 1:3,176,761-3,177,827 | + | C2H1g19388 | CX1g006498 | LOC_Os01g07590 | Os01g0849600 | - | Detail |
| C1H1g30649 | 1:3,179,502-3,182,869 | + | C2H1g10083 | CX1g001258 | LOC_Os01g07600 | Os01g0170700 | - | Detail |
| C1H1g30232 | 1:3,196,412-3,196,759 | - | C2H1g06196 | CX1g005520 | LOC_Os01g07620 | Os01g0170900 | - | Detail |
| C1H1g10821 | 1:3,198,913-3,204,645 | - | C2H1g29680 | CX1g000199 | LOC_Os01g07630 | Os01g0171000 | - | Detail |
| C1H1g27422 | 1:3,209,863-3,217,430 | - | C2H1g04571 | CX1g001021 | LOC_Os01g07640 | Os01g0171100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g23293 | 9:17,237,498-17,241,720 | - | C1H9g12508 | CX9g056886 | LOC_Os09g34990 | Os09g0521800 | - | Detail |
| C2H9g12959 | 9:17,244,294-17,248,356 | + | C1H9g22775 | CX9g058042 | LOC_Os09g35000 | Os09g0521900 | RAD, OsGEN1, rad, rad*, OsRAD, GEN1, OsGEN-L | Detail |
| C2H9g15101 | 9:17,249,838-17,250,716 | + | - | - | - | - | - | Detail |
| C2H9g06843 | 9:17,263,090-17,263,671 | + | - | CX11g014678 | - | - | - | Detail |
| C2H9g00413 | 9:17,263,682-17,263,970 | + | - | - | - | - | - | Detail |
| C2H9g13075 | 9:17,315,214-17,317,637 | - | C1H9g22926 | CX9g057513 | LOC_Os09g35630 | Os09g0524800 | - | Detail |
| C2H9g25776 | 9:17,325,847-17,329,040 | + | C1H9g31662 | CX9g056603 | LOC_Os09g35670 | Os09g0525200 | - | Detail |
| C2H9g21918 | 9:17,329,621-17,332,264 | - | C1H9g25445 | CX9g055378 | LOC_Os09g35680 | Os09g0525300 | - | Detail |
| C2H9g18090 | 9:17,332,743-17,333,235 | + | - | - | - | - | - | Detail |
| C2H9g16534 | 9:17,336,698-17,341,474 | - | C1H9g08911 | CX9g058055 | LOC_Os09g35690 | Os09g0525400 | E3BB | Detail |
| C2H9g00761 | 9:17,342,206-17,342,619 | + | C1H9g02024 | CX9g057849 | LOC_Os09g35700 | Os09g0525500 | - | Detail |
| C2H9g16855 | 9:17,343,281-17,348,296 | - | C1H9g15317 | CX9g057451 | LOC_Os09g35710 | Os09g0525600 | - | Detail |
| C2H9g29379 | 9:17,350,467-17,356,488 | - | C1H9g29308 | CX9g057247 | LOC_Os09g35720 | Os09g0525700 | - | Detail |
| C2H9g07857 | 9:17,358,469-17,361,650 | - | C1H9g08625 | CX9g055034 | LOC_Os09g35730 | Os09g0525900 | - | Detail |
| C2H9g18140 | 9:17,365,844-17,367,855 | + | C1H9g31758 | CX9g054877 | LOC_Os09g35740 | - | - | Detail |
| C2H9g08359 | 9:17,379,953-17,386,025 | - | C1H9g21556 | CX9g057694 | LOC_Os09g35760 | Os09g0526300 | - | Detail |
| C2H9g23914 | 9:17,398,899-17,399,452 | - | C1H9g12923 | - | - | - | - | Detail |
| C2H9g25457 | 9:17,401,310-17,402,916 | - | C1H9g05187 | CX9g056876 | LOC_Os09g35790 | Os09g0526600 | - | Detail |
| C2H9g28414 | 9:17,408,099-17,410,200 | - | C1H9g15216 | CX9g055153 | LOC_Os09g35800 | Os09g0526700 | - | Detail |
| C2H9g05438 | 9:17,413,778-17,416,569 | - | C1H9g04329 | CX9g057418 | LOC_Os09g35810 | Os09g0526800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |